TomoSeq data search

Data search

Results for MligTC455_41468

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_41468	198	4.13	Mlig455_054108	Neo: - Age: -	DCAF13	Mlig455_054108 {REF} {Length: 3092} {TRANSSPLICED} {Pfam: Sof1-like domain [PF04158.16, score=89.3]; WD domain, G-beta repeat [PF00400.34, score=64.5]; Beta-lactamase superfamily domain [PF12706.9, score=55.5]; Metallo-beta-lactamase superfamily [PF00753.29, score=37.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=19.4]} {Human: ENSG00000164934, DCAF13, DDB1 and CUL4 associated factor 13, [RH, Score=383, Expect=3e-125]} {Mouse: ENSMUSG00000106903, Dcaf13, DDB1 and CUL4 associated factor 13, [RH, Score=394, Expect=8e-130]; ENSMUSG00000022300, Dcaf13, DDB1 and CUL4 associated factor 13, [RH, Score=394, Expect=8e-130]} {Dmel: FBgn0036500, CG7275, [RH, Score=372, Expect=2e-121]} {Celegans: WBGene00022742, ZK430.7, [RH, Score=313, Expect=5e-99]} {Smed: dd_Smed_v6_6405_0_1, dd_Smed_v6_6405_0_1, [RH, Score=283, Expect=1e-87]} {RNA1509_13637} {RNA1310_20401} {RNA815_8317}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41468

198

4.13

Mlig455_054108

Neo: -

Age: -

DCAF13

Mlig455_054108 {REF} {Length: 3092} {TRANSSPLICED} {Pfam: Sof1-like domain [PF04158.16, score=89.3]; WD domain, G-beta repeat [PF00400.34, score=64.5]; Beta-lactamase superfamily domain [PF12706.9, score=55.5]; Metallo-beta-lactamase superfamily [PF00753.29, score=37.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=19.4]} {Human: ENSG00000164934, DCAF13, DDB1 and CUL4 associated factor 13, [RH, Score=383, Expect=3e-125]} {Mouse: ENSMUSG00000106903, Dcaf13, DDB1 and CUL4 associated factor 13, [RH, Score=394, Expect=8e-130]; ENSMUSG00000022300, Dcaf13, DDB1 and CUL4 associated factor 13, [RH, Score=394, Expect=8e-130]} {Dmel: FBgn0036500, CG7275, [RH, Score=372, Expect=2e-121]} {Celegans: WBGene00022742, ZK430.7, [RH, Score=313, Expect=5e-99]} {Smed: dd_Smed_v6_6405_0_1, dd_Smed_v6_6405_0_1, [RH, Score=283, Expect=1e-87]} {RNA1509_13637} {RNA1310_20401} {RNA815_8317}

Cumulative graph for MligTC455_41468

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.174	2.725	0.90558	1.00000
RegionR2	-0.01	2.725	0.99137	1.00000
RegionR3	0.313	2.725	0.57066	1.00000
RegionR4	0.35	2.725	0.59319	0.90735
RegionR5	0.562	2.725	0.26341	0.58550
RegionR6	-0.119	2.725	0.84779	1.00000
RegionR7	-1.032	2.725	0.24113	0.86566
RegionR8	-0.239	2.725	0.79509	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.781	2.725	0.24357	0.96633
RegenerationR2	0.085	2.725	0.90252	1.00000
RegenerationR3	0.726	2.725	0.26633	0.70106
RegenerationR4	0.074	2.725	0.90971	1.00000
RegenerationR5	0.512	2.725	0.38562	0.78940
RegenerationR6	0.637	2.725	0.37642	0.71828
RegenerationBL	-1.448	2.725	0.26791	0.62704
RegenerationTP	0.413	2.725	0.68424	1.00000

Genes with expression patterns similar to MligTC455_41468

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41468	198	4.13	Mlig455_054108	Neo: - Age: -	DCAF13	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_054108 {REF} {Length: 3092} {TRANSSPLICED} {Pfam: Sof1-like domain [PF04158.16, score=89.3]; WD domain, G-beta repeat [PF00400.34, score=64.5]; Beta-lactamase superfamily domain [PF12706.9, score=55.5]; Metallo-beta-lactamase superfamily [PF00753.29, score=37.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=19.4]} {Human: ENSG00000164934, DCAF13, DDB1 and CUL4 associated factor 13, [RH, Score=383, Expect=3e-125]} {Mouse: ENSMUSG00000106903, Dcaf13, DDB1 and CUL4 associated factor 13, [RH, Score=394, Expect=8e-130]; ENSMUSG00000022300, Dcaf13, DDB1 and CUL4 associated factor 13, [RH, Score=394, Expect=8e-130]} {Dmel: FBgn0036500, CG7275, [RH, Score=372, Expect=2e-121]} {Celegans: WBGene00022742, ZK430.7, [RH, Score=313, Expect=5e-99]} {Smed: dd_Smed_v6_6405_0_1, dd_Smed_v6_6405_0_1, [RH, Score=283, Expect=1e-87]} {RNA1509_13637} {RNA1310_20401} {RNA815_8317}
2.	MligTC455_30043	144	3	Mlig455_067016	Neo: - Age: Up-Down-Up	TMEM94	1.732	-	-	-	-	0.782	0.950	Mlig455_067016 {REF} {Length: 5329} {Human: ENSG00000177728, TMEM94, transmembrane protein 94, [RH, Score=206, Expect=6e-53]} {Mouse: ENSMUSG00000020747, Tmem94, transmembrane protein 94, [RH, Score=205, Expect=6e-53]} {Dmel: FBgn0022153, l(2)k05819, lethal (2) k05819, [RH, Score=400, Expect=5e-117]} {Celegans: WBGene00017010, D1007.15, [RH, Score=189, Expect=2e-48]} {Smed: dd_Smed_v6_12358_0_1, dd_Smed_v6_12358_0_1, [RH, Score=325, Expect=5e-93]} {RNA1509_7674} {RNA1310_1886.2} {RNA815_651}
3.	MligTC455_48282	729	15.19	Mlig455_026572, Mlig455_027325	Neo: - Age: Up-Up-Down	VMP1	0.951	-	-	-	-	-	0.951	Mlig455_026572 {REF} {Length: 7165} {Pfam: SAP domain [PF02037.29, score=41.2]; SNARE associated Golgi protein [PF09335.13, score=32.8]; SAP domain-containing new25 [PF18953.2, score=19.7]} {Human: ENSG00000062716, VMP1, vacuole membrane protein 1, [RH, Score=381, Expect=5e-128]} {Mouse: ENSMUSG00000018171, Vmp1, vacuole membrane protein 1, [RH, Score=387, Expect=9e-131]} {Dmel: FBgn0052675, Tango5, Transport and Golgi organization 5, [RH, Score=379, Expect=7e-126]} {Celegans: WBGene00012559, epg-3, Ectopic P granules protein 3, [RH, Score=371, Expect=7e-124]} {Smed: dd_Smed_v6_1156_0_1, dd_Smed_v6_1156_0_1, [RH, Score=281, Expect=6e-90]} {RNA1509_24070} {RNA1310_16761} {RNA815_1510} Mlig455_027325 {REF} {Length: 6928} {Pfam: SAP domain [PF02037.29, score=41.2]; SNARE associated Golgi protein [PF09335.13, score=32.8]; SAP domain-containing new25 [PF18953.2, score=19.7]} {Human: ENSG00000062716, VMP1, vacuole membrane protein 1, [RH, Score=381, Expect=5e-128]} {Mouse: ENSMUSG00000018171, Vmp1, vacuole membrane protein 1, [RH, Score=387, Expect=8e-131]} {Dmel: FBgn0052675, Tango5, Transport and Golgi organization 5, [RH, Score=378, Expect=2e-125]} {Celegans: WBGene00012559, epg-3, Ectopic P granules protein 3, [RH, Score=371, Expect=9e-124]} {Smed: dd_Smed_v6_1156_0_1, dd_Smed_v6_1156_0_1, [RH, Score=281, Expect=7e-90]} {RNA1509_24070} {RNA1310_16761} {RNA815_1510}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_41468

198

4.13

Mlig455_054108

Neo: -

Age: -

DCAF13

1.000

MligTC455_30043

144

Mlig455_067016

Neo: -

Age: Up-Down-Up

TMEM94

1.732

0.782

0.950

Mlig455_067016 {REF} {Length: 5329} {Human: ENSG00000177728, TMEM94, transmembrane protein 94, [RH, Score=206, Expect=6e-53]} {Mouse: ENSMUSG00000020747, Tmem94, transmembrane protein 94, [RH, Score=205, Expect=6e-53]} {Dmel: FBgn0022153, l(2)k05819, lethal (2) k05819, [RH, Score=400, Expect=5e-117]} {Celegans: WBGene00017010, D1007.15, [RH, Score=189, Expect=2e-48]} {Smed: dd_Smed_v6_12358_0_1, dd_Smed_v6_12358_0_1, [RH, Score=325, Expect=5e-93]} {RNA1509_7674} {RNA1310_1886.2} {RNA815_651}

MligTC455_48282

729

15.19

Mlig455_026572, Mlig455_027325

Neo: -

Age: Up-Up-Down

VMP1

0.951

Mlig455_026572 {REF} {Length: 7165} {Pfam: SAP domain [PF02037.29, score=41.2]; SNARE associated Golgi protein [PF09335.13, score=32.8]; SAP domain-containing new25 [PF18953.2, score=19.7]} {Human: ENSG00000062716, VMP1, vacuole membrane protein 1, [RH, Score=381, Expect=5e-128]} {Mouse: ENSMUSG00000018171, Vmp1, vacuole membrane protein 1, [RH, Score=387, Expect=9e-131]} {Dmel: FBgn0052675, Tango5, Transport and Golgi organization 5, [RH, Score=379, Expect=7e-126]} {Celegans: WBGene00012559, epg-3, Ectopic P granules protein 3, [RH, Score=371, Expect=7e-124]} {Smed: dd_Smed_v6_1156_0_1, dd_Smed_v6_1156_0_1, [RH, Score=281, Expect=6e-90]} {RNA1509_24070} {RNA1310_16761} {RNA815_1510}

Mlig455_027325 {REF} {Length: 6928} {Pfam: SAP domain [PF02037.29, score=41.2]; SNARE associated Golgi protein [PF09335.13, score=32.8]; SAP domain-containing new25 [PF18953.2, score=19.7]} {Human: ENSG00000062716, VMP1, vacuole membrane protein 1, [RH, Score=381, Expect=5e-128]} {Mouse: ENSMUSG00000018171, Vmp1, vacuole membrane protein 1, [RH, Score=387, Expect=8e-131]} {Dmel: FBgn0052675, Tango5, Transport and Golgi organization 5, [RH, Score=378, Expect=2e-125]} {Celegans: WBGene00012559, epg-3, Ectopic P granules protein 3, [RH, Score=371, Expect=9e-124]} {Smed: dd_Smed_v6_1156_0_1, dd_Smed_v6_1156_0_1, [RH, Score=281, Expect=7e-90]} {RNA1509_24070} {RNA1310_16761} {RNA815_1510}