TomoSeq data search

Data search

Results for MligTC455_41479

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_41479	29080	605.83	Mlig455_002142	Neo: - Age: logFC(26M/2M)=0.301	RPL4	Mlig455_002142 {REF} {Length: 1382} {TRANSSPLICED} {Pfam: Ribosomal protein L4/L1 family [PF00573.24, score=141.4]; 60S ribosomal protein L4 C-terminal domain [PF14374.8, score=80.8]} {Human: ENSG00000174444, RPL4, ribosomal protein L4, [RH, Score=444, Expect=4e-155]} {Mouse: ENSMUSG00000032399, Rpl4, ribosomal protein L4, [RH, Score=444, Expect=3e-155]} {Dmel: FBgn0003279, RpL4, Ribosomal protein L4, [RH, Score=426, Expect=3e-148]} {Celegans: WBGene00004415, rpl-4, 60S ribosomal protein L4, [RH, Score=398, Expect=1e-138]} {Smed: dd_Smed_v6_211_0_1, dd_Smed_v6_211_0_1, [RH, Score=395, Expect=6e-137]} {RNA1509_607, RNA1509_6186} {RNA1310_19510, RNA1509_607, RNA1509_6186} {RNA1509_607, RNA1509_6186, RNA815_10403}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_41479

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.044	9.293	0.00080	0.09554
RegionR2	-0.213	9.293	0.37810	0.77269
RegionR3	0.283	9.293	0.16858	0.69213
RegionR4	0.239	9.293	0.29964	0.61232
RegionR5	0.365	9.293	0.06656	0.22987
RegionR6	0.337	9.293	0.09948	0.57911
RegionR7	0.476	9.293	0.01759	0.24321
RegionR8	-0.443	9.293	0.05839	0.47206

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.055	9.293	0.88622	1.00000
RegenerationR2	-0.118	9.293	0.66095	0.94196
RegenerationR3	0.149	9.293	0.58462	0.90059
RegenerationR4	-0.114	9.293	0.68192	0.94614
RegenerationR5	-0.271	9.293	0.31078	0.73652
RegenerationR6	0.175	9.293	0.51424	0.81636
RegenerationBL	0.416	9.293	0.06742	0.30246
RegenerationTP	-0.186	9.293	0.46152	0.87514

Genes with expression patterns similar to MligTC455_41479

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41479	29080	605.83	Mlig455_002142	Neo: - Age: logFC(26M/2M)=0.301	RPL4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_002142 {REF} {Length: 1382} {TRANSSPLICED} {Pfam: Ribosomal protein L4/L1 family [PF00573.24, score=141.4]; 60S ribosomal protein L4 C-terminal domain [PF14374.8, score=80.8]} {Human: ENSG00000174444, RPL4, ribosomal protein L4, [RH, Score=444, Expect=4e-155]} {Mouse: ENSMUSG00000032399, Rpl4, ribosomal protein L4, [RH, Score=444, Expect=3e-155]} {Dmel: FBgn0003279, RpL4, Ribosomal protein L4, [RH, Score=426, Expect=3e-148]} {Celegans: WBGene00004415, rpl-4, 60S ribosomal protein L4, [RH, Score=398, Expect=1e-138]} {Smed: dd_Smed_v6_211_0_1, dd_Smed_v6_211_0_1, [RH, Score=395, Expect=6e-137]} {RNA1509_607, RNA1509_6186} {RNA1310_19510, RNA1509_607, RNA1509_6186} {RNA1509_607, RNA1509_6186, RNA815_10403}
2.	MligTC455_41480	57842	1205.03	Mlig455_002243, Mlig455_002287	Neo: Int S/G2/M Age: logFC(26M/2M)=0.450	RPL4	5.977	0.998	1.000	0.998	0.990	0.998	0.993	Mlig455_002243 {REF} {Length: 1608} {TRANSSPLICED} {Pfam: Ribosomal protein L4/L1 family [PF00573.24, score=141.4]; 60S ribosomal protein L4 C-terminal domain [PF14374.8, score=80.8]} {Human: ENSG00000174444, RPL4, ribosomal protein L4, [RH, Score=444, Expect=4e-155]} {Mouse: ENSMUSG00000032399, Rpl4, ribosomal protein L4, [RH, Score=444, Expect=3e-155]} {Dmel: FBgn0003279, RpL4, Ribosomal protein L4, [RH, Score=426, Expect=3e-148]} {Celegans: WBGene00004415, rpl-4, 60S ribosomal protein L4, [RH, Score=398, Expect=1e-138]} {Smed: dd_Smed_v6_211_0_1, dd_Smed_v6_211_0_1, [RH, Score=395, Expect=6e-137]} {RNA1509_2551, RNA1509_2758, RNA1509_50727, RNA1509_6889, RNA1509_865} {RNA1310_19510, RNA1509_2551, RNA1509_2758, RNA1509_50727, RNA1509_6889, RNA1509_865} {RNA1509_2551, RNA1509_2758, RNA1509_50727, RNA1509_6889, RNA1509_865, RNA815_10403} Mlig455_002287 {REF} {Length: 1666} {TRANSSPLICED} {Pfam: Ribosomal protein L4/L1 family [PF00573.24, score=141.4]; 60S ribosomal protein L4 C-terminal domain [PF14374.8, score=80.8]} {Human: ENSG00000174444, RPL4, ribosomal protein L4, [RH, Score=444, Expect=4e-155]} {Mouse: ENSMUSG00000032399, Rpl4, ribosomal protein L4, [RH, Score=444, Expect=3e-155]} {Dmel: FBgn0003279, RpL4, Ribosomal protein L4, [RH, Score=426, Expect=3e-148]} {Celegans: WBGene00004415, rpl-4, 60S ribosomal protein L4, [RH, Score=398, Expect=1e-138]} {Smed: dd_Smed_v6_211_0_1, dd_Smed_v6_211_0_1, [RH, Score=395, Expect=6e-137]} {RNA1509_15258, RNA1509_31757, RNA1509_49628, RNA1509_865} {RNA1310_19510, RNA1509_15258, RNA1509_31757, RNA1509_49628} {RNA1509_15258, RNA1509_31757, RNA1509_49628, RNA815_10403}
3.	MligTC455_25999	342	7.12	Mlig455_026338, Mlig455_052698	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_026338 {REF} {Length: 3946} {TRANSSPLICED} {Pfam: Got1/Sft2-like family [PF04178.14, score=99.9]} {Mouse: ENSMUSG00000044982, Sft2d3, SFT2 domain containing 3, [Score=52.4, Expect=1e-07]} {Dmel: FBgn0053635, CG33635, [RH, Score=100, Expect=1e-25]} {Celegans: WBGene00007690, sftd-3, Vesicle transport protein, [Score=83.2, Expect=8e-19]} {Smed: dd_Smed_v6_6215_0_1, dd_Smed_v6_6215_0_1, [Score=129, Expect=1e-36]} {RNA1509_31244, RNA1509_41130, RNA1509_52267} {RNA1310_19436, RNA1509_41130, RNA1509_52267} {RNA1509_41130, RNA1509_52267, RNA815_16404} Mlig455_052698 {REF} {Length: 3041} {TRANSSPLICED} {Pfam: Got1/Sft2-like family [PF04178.14, score=97.9]} {Mouse: ENSMUSG00000044982, Sft2d3, SFT2 domain containing 3, [Score=47.8, Expect=3e-06]} {Dmel: FBgn0053635, CG33635, [Score=95.1, Expect=2e-23]} {Celegans: WBGene00007690, sftd-3, Vesicle transport protein, [Score=79.3, Expect=2e-17]} {Smed: dd_Smed_v6_6215_0_1, dd_Smed_v6_6215_0_1, [Score=126, Expect=1e-35]} {RNA1509_31244} {RNA1310_19436, RNA1509_31244} {RNA1509_31244, RNA815_16404}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_41479

29080

605.83

Mlig455_002142

Neo: -

Age: logFC(26M/2M)=0.301

RPL4

1.000

MligTC455_41480

57842

1205.03

Mlig455_002243, Mlig455_002287

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.450

RPL4

5.977

0.998

1.000

0.998

0.990

0.998

0.993

Mlig455_002243 {REF} {Length: 1608} {TRANSSPLICED} {Pfam: Ribosomal protein L4/L1 family [PF00573.24, score=141.4]; 60S ribosomal protein L4 C-terminal domain [PF14374.8, score=80.8]} {Human: ENSG00000174444, RPL4, ribosomal protein L4, [RH, Score=444, Expect=4e-155]} {Mouse: ENSMUSG00000032399, Rpl4, ribosomal protein L4, [RH, Score=444, Expect=3e-155]} {Dmel: FBgn0003279, RpL4, Ribosomal protein L4, [RH, Score=426, Expect=3e-148]} {Celegans: WBGene00004415, rpl-4, 60S ribosomal protein L4, [RH, Score=398, Expect=1e-138]} {Smed: dd_Smed_v6_211_0_1, dd_Smed_v6_211_0_1, [RH, Score=395, Expect=6e-137]} {RNA1509_2551, RNA1509_2758, RNA1509_50727, RNA1509_6889, RNA1509_865} {RNA1310_19510, RNA1509_2551, RNA1509_2758, RNA1509_50727, RNA1509_6889, RNA1509_865} {RNA1509_2551, RNA1509_2758, RNA1509_50727, RNA1509_6889, RNA1509_865, RNA815_10403}

Mlig455_002287 {REF} {Length: 1666} {TRANSSPLICED} {Pfam: Ribosomal protein L4/L1 family [PF00573.24, score=141.4]; 60S ribosomal protein L4 C-terminal domain [PF14374.8, score=80.8]} {Human: ENSG00000174444, RPL4, ribosomal protein L4, [RH, Score=444, Expect=4e-155]} {Mouse: ENSMUSG00000032399, Rpl4, ribosomal protein L4, [RH, Score=444, Expect=3e-155]} {Dmel: FBgn0003279, RpL4, Ribosomal protein L4, [RH, Score=426, Expect=3e-148]} {Celegans: WBGene00004415, rpl-4, 60S ribosomal protein L4, [RH, Score=398, Expect=1e-138]} {Smed: dd_Smed_v6_211_0_1, dd_Smed_v6_211_0_1, [RH, Score=395, Expect=6e-137]} {RNA1509_15258, RNA1509_31757, RNA1509_49628, RNA1509_865} {RNA1310_19510, RNA1509_15258, RNA1509_31757, RNA1509_49628} {RNA1509_15258, RNA1509_31757, RNA1509_49628, RNA815_10403}

MligTC455_25999

342

7.12

Mlig455_026338, Mlig455_052698

Neo: -

Age: -

0.951

Mlig455_026338 {REF} {Length: 3946} {TRANSSPLICED} {Pfam: Got1/Sft2-like family [PF04178.14, score=99.9]} {Mouse: ENSMUSG00000044982, Sft2d3, SFT2 domain containing 3, [Score=52.4, Expect=1e-07]} {Dmel: FBgn0053635, CG33635, [RH, Score=100, Expect=1e-25]} {Celegans: WBGene00007690, sftd-3, Vesicle transport protein, [Score=83.2, Expect=8e-19]} {Smed: dd_Smed_v6_6215_0_1, dd_Smed_v6_6215_0_1, [Score=129, Expect=1e-36]} {RNA1509_31244, RNA1509_41130, RNA1509_52267} {RNA1310_19436, RNA1509_41130, RNA1509_52267} {RNA1509_41130, RNA1509_52267, RNA815_16404}

Mlig455_052698 {REF} {Length: 3041} {TRANSSPLICED} {Pfam: Got1/Sft2-like family [PF04178.14, score=97.9]} {Mouse: ENSMUSG00000044982, Sft2d3, SFT2 domain containing 3, [Score=47.8, Expect=3e-06]} {Dmel: FBgn0053635, CG33635, [Score=95.1, Expect=2e-23]} {Celegans: WBGene00007690, sftd-3, Vesicle transport protein, [Score=79.3, Expect=2e-17]} {Smed: dd_Smed_v6_6215_0_1, dd_Smed_v6_6215_0_1, [Score=126, Expect=1e-35]} {RNA1509_31244} {RNA1310_19436, RNA1509_31244} {RNA1509_31244, RNA815_16404}