Data search
Results for MligTC455_41554
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41554 | 333 | 6.93 | Mlig455_007047 | Neo: Irradiation Age: Up-Down-Down |
Mlig455_007047 {REF} {Length: 2678} {RNA1509_48279} {RNA1310_15070.1, RNA1509_48279} {RNA1509_48279, RNA815_4048} |
Cumulative graph for MligTC455_41554
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.904 | 3.3 | 0.54642 | 1.00000 | |
| RegionR2 | 0.31 | 3.3 | 0.59714 | 0.94865 | |
| RegionR3 | -0.087 | 3.3 | 0.85354 | 1.00000 | |
| RegionR4 | 0.011 | 3.3 | 0.98071 | 1.00000 | |
| RegionR5 | 0.917 | 3.3 | 0.01275 | 0.06903 | |
| RegionR6 | 0.404 | 3.3 | 0.37469 | 0.95525 | |
| RegionR7 | -0.349 | 3.3 | 0.62197 | 1.00000 | |
| RegionR8 | -0.302 | 3.3 | 0.73031 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.067 | 3.3 | 0.36283 | 1.00000 | |
| RegenerationR2 | 0.025 | 3.3 | 0.95601 | 1.00000 | |
| RegenerationR3 | -0.153 | 3.3 | 0.75917 | 0.96734 | |
| RegenerationR4 | -0.027 | 3.3 | 0.95688 | 1.00000 | |
| RegenerationR5 | 0.115 | 3.3 | 0.76422 | 0.97668 | |
| RegenerationR6 | 0.497 | 3.3 | 0.29549 | 0.64576 | |
| RegenerationBL | 0.938 | 3.3 | 0.13137 | 0.43223 | |
| RegenerationTP | 0.259 | 3.3 | 0.74035 | 1.00000 |
Genes with expression patterns similar to MligTC455_41554
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41554 | 333 | 6.93 | Mlig455_007047 | Neo: Irradiation Age: Up-Down-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_007047 {REF} {Length: 2678} {RNA1509_48279} {RNA1310_15070.1, RNA1509_48279} {RNA1509_48279, RNA815_4048} | |
| 2. | MligTC455_28557 | 612 | 12.75 | Mlig455_030120 | Neo: - Age: - |
GMPS | 1.751 | - | - | - | 0.801 | - | 0.950 | Mlig455_030120 {REF} {Length: 2925} {TRANSSPLICED} {Pfam: Glutamine amidotransferase class-I [PF00117.30, score=117.7]; GMP synthase C terminal domain [PF00958.24, score=57.0]; Peptidase C26 [PF07722.15, score=49.2]; NAD synthase [PF02540.19, score=29.8]; Asparagine synthase [PF00733.23, score=24.2]; Queuosine biosynthesis protein QueC [PF06508.15, score=23.1]; tRNA methyl transferase [PF03054.18, score=19.0]} {Human: ENSG00000163655, GMPS, guanine monophosphate synthase, [RH, Score=733, Expect=0.0]} {Mouse: ENSMUSG00000027823, Gmps, guanine monophosphate synthetase, [RH, Score=736, Expect=0.0]} {Dmel: FBgn0000239, bur, burgundy, [RH, Score=714, Expect=0.0]} {Celegans: WBGene00010912, gmps-1, Probable GMP synthase [glutamine-hydrolyzing], [RH, Score=628, Expect=0.0]} {Smed: dd_Smed_v6_5054_0_1, dd_Smed_v6_5054_0_1, [RH, Score=701, Expect=0.0]} {RNA1509_11658} {RNA1310_4718} {RNA815_2186} |
| 3. | MligTC455_52792 | 229 | 4.77 | Mlig455_038012 | Neo: - Age: - |
0.98 | - | - | - | - | - | 0.980 | Mlig455_038012 {REF} {Length: 3785} {TRANSSPLICED} {Pfam: Vacuolar sorting 38 and autophagy-related subunit 14 [PF10186.11, score=24.9]} {RNA1509_42202, RNA1509_55892, RNA1509_59923} {RNA1310_23418.2, RNA1509_42202, RNA1509_55892, RNA1509_59923} {RNA1509_42202, RNA1509_55892, RNA1509_59923, RNA815_10560} | |
| 4. | MligTC455_18260 | 761 | 15.86 | Mlig455_050054, Mlig455_050069, Mlig455_054015 | Neo: - Age: logFC(26M/2M)=0.525 Region-enriched R5: 2.227/0.00410 |
WDR44 | 0.968 | - | - | - | - | - | 0.968 | Mlig455_050054 {REF} {Length: 4045} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=96.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=42.4]} {Human: ENSG00000131725, WDR44, WD repeat domain 44, [RH, Score=372, Expect=2e-115]} {Mouse: ENSMUSG00000036769, Wdr44, WD repeat domain 44, [RH, Score=369, Expect=1e-114]} {Dmel: FBgn0083969, CG34133, [RH, Score=367, Expect=2e-112]} {Celegans: WBGene00006369, sym-4, SYM-4, [RH, Score=323, Expect=1e-96]} {Smed: dd_Smed_v6_6175_0_2, dd_Smed_v6_6175_0_2, [RH, Score=388, Expect=9e-122]} {RNA1509_9649} {RNA1310_5900} {RNA815_7039} Mlig455_050069 {REF} {Length: 4045} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=96.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=42.4]} {Human: ENSG00000131725, WDR44, WD repeat domain 44, [RH, Score=372, Expect=2e-115]} {Mouse: ENSMUSG00000036769, Wdr44, WD repeat domain 44, [RH, Score=369, Expect=1e-114]} {Dmel: FBgn0083969, CG34133, [RH, Score=367, Expect=2e-112]} {Celegans: WBGene00006369, sym-4, SYM-4, [RH, Score=323, Expect=1e-96]} {Smed: dd_Smed_v6_6175_0_2, dd_Smed_v6_6175_0_2, [RH, Score=388, Expect=9e-122]} {RNA1509_9649} {RNA1310_5900} {RNA815_7039} Mlig455_054015 {REF} {Length: 6043} {TRANSSPLICED} {Human: ENSG00000131725, WDR44, WD repeat domain 44, [Score=63.9, Expect=2e-10]} {Mouse: ENSMUSG00000036769, Wdr44, WD repeat domain 44, [Score=63.9, Expect=1e-10]} {Dmel: FBgn0083969, CG34133, [Score=49.7, Expect=3e-06]} {Celegans: WBGene00006369, sym-4, SYM-4, [Score=50.1, Expect=2e-06]} {Smed: dd_Smed_v6_6175_0_2, dd_Smed_v6_6175_0_2, [Score=68.9, Expect=2e-12]} {RNA1509_9649} {RNA1310_5900} {RNA815_7039} |
| 5. | MligTC455_13364 | 306 | 6.37 | Mlig455_000613 | Neo: - Age: Up-Down-Up |
CTNS | 0.966 | - | - | - | - | - | 0.966 | Mlig455_000613 {REF} {Length: 2822} {TRANSSPLICED} {Pfam: PQ loop repeat [PF04193.16, score=113.4]} {Human: ENSG00000040531, CTNS, cystinosin, lysosomal cystine transporter, [RH, Score=298, Expect=1e-97]} {Mouse: ENSMUSG00000005949, Ctns, cystinosis, nephropathic, [RH, Score=275, Expect=4e-89]} {Dmel: FBgn0039045, CG17119, [RH, Score=281, Expect=4e-91]} {Celegans: WBGene00008052, ctns-1, Cystinosin homolog, [RH, Score=237, Expect=1e-74]} {Smed: dd_Smed_v6_4571_0_1, dd_Smed_v6_4571_0_1, [RH, Score=286, Expect=5e-94]} {RNA1509_18671, RNA1509_54356} {RNA1310_24837, RNA1509_18671, RNA1509_54356} {RNA1509_18671, RNA1509_54356, RNA815_14149} |
| 6. | MligTC455_16219 | 160 | 3.33 | Mlig455_046926 | Neo: - Age: - Region-enriched R7: 2.535/0.01658 |
0.961 | - | - | - | - | - | 0.961 | Mlig455_046926 {REF} {Length: 3093} {RNA1509_37336} {RNA1310_6936.1} {RNA815_9561.1} | |
| 7. | MligTC455_27925 | 257 | 5.36 | Mlig455_038131 | Neo: - Age: logFC(26M/2M)=0.373 Region-enriched R5: 2.346/0.00504 |
SCOC | 0.96 | - | - | - | - | - | 0.960 | Mlig455_038131 {REF} {Length: 1290} {Pfam: Short coiled-coil protein [PF10224.11, score=82.0]; Myosin tail [PF01576.21, score=19.2]} {Human: ENSG00000153130, SCOC, short coiled-coil protein, [RH, Score=102, Expect=4e-29]} {Mouse: ENSMUSG00000063253, Scoc, short coiled-coil protein, [RH, Score=102, Expect=3e-29]} {Dmel: FBgn0039505, CG5934, [RH, Score=107, Expect=1e-30]} {Celegans: WBGene00006802, unc-69, Short coiled-coil domain-containing protein UNC-69 splice variant T07A5.6b, [RH, Score=80.1, Expect=8e-20]} {Smed: dd_Smed_v6_6577_0_3, dd_Smed_v6_6577_0_3, [RH, Score=94.7, Expect=3e-26]} {RNA1509_38570, RNA1509_46931} {RNA1310_25051.2, RNA1509_38570} {RNA1509_38570, RNA815_11190} |
| 8. | MligTC455_31307 | 60 | 1.25 | Mlig455_050632 | Neo: - Age: Down-Down-Down |
0.955 | - | - | - | - | - | 0.955 | Mlig455_050632 {REF} {Length: 2484} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1} |