TomoSeq data search

Data search

Results for MligTC455_41562

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_41562	161	3.35	Mlig455_046048	Neo: - Age: - Region-enriched R7: 2.886/0.04301		Mlig455_046048 {REF} {Length: 2037} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=19.0]} {RNA1310_33754} {RNA815_45610}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_41562

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-4.081	2.167	0.45673	1.00000
RegionR2	-0.832	2.167	0.97283	1.00000
RegionR3	1.444	2.167	0.08111	0.50382
RegionR4	-0.662	2.167	0.99207	1.00000
RegionR5	-2.208	2.167	1.00000	1.00000
RegionR6	2.332	2.167	0.00256	0.07168
RegionR7	2.886	2.167	0.00134	0.04301
RegionR8	1.122	2.167	0.37835	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.256	2.167	1.00000	1.00000
RegenerationR2	-0.252	2.167	0.74226	0.97069
RegenerationR3	0.171	2.167	0.84043	0.99483
RegenerationR4	0.785	2.167	0.39045	0.80755
RegenerationR5	1.952	2.167	0.07671	0.43264
RegenerationR6	-0.882	2.167	0.25443	0.60446
RegenerationBL	-1.41	2.167	0.15941	0.47829
RegenerationTP	0.474	2.167	0.60915	0.96616

Genes with expression patterns similar to MligTC455_41562

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41562	161	3.35	Mlig455_046048	Neo: - Age: - Region-enriched R7: 2.886/0.04301		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_046048 {REF} {Length: 2037} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=19.0]} {RNA1310_33754} {RNA815_45610}
2.	MligTC455_39406	44	0.92	Mlig455_026121	Neo: - Age: Up-Down-Down	RBMS1	1.774	0.953	-	-	-	0.821	-	Mlig455_026121 {REF} {Length: 2550} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=40.0]} {Human: ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [Score=106, Expect=1e-24]; ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [Score=102, Expect=5e-23]; ENSG00000076067, RBMS2, RNA binding motif single stranded interacting protein 2, [Score=102, Expect=4e-23]} {Mouse: ENSMUSG00000026970, Rbms1, RNA binding motif, single stranded interacting protein 1, [Score=110, Expect=4e-26]} {Dmel: FBgn0052423, shep, alan shepard, [Score=84.7, Expect=3e-17]} {Celegans: WBGene00006331, sup-26, SUPpressor, [Score=100, Expect=9e-23]} {Smed: dd_Smed_v6_3832_0_1, dd_Smed_v6_3832_0_1, [RH, Score=105, Expect=9e-25]} {RNA1310_39053} {RNA815_20087}
3.	MligTC455_16621	49	1.02	Mlig455_020457	Neo: - Age: Up-Down-Up		1.657	0.955	-	-	-	-	0.702	Mlig455_020457 {REF} {Length: 2984} {Pfam: Papain family cysteine protease [PF00112.25, score=19.4]} {RNA1509_11606} {RNA1310_6063.3} {RNA815_1093}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_41562

161

3.35

Mlig455_046048

Neo: -

Age: -

Region-enriched R7: 2.886/0.04301

1.000

Mlig455_046048 {REF} {Length: 2037} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=19.0]} {RNA1310_33754} {RNA815_45610}

MligTC455_39406

0.92

Mlig455_026121

Neo: -

Age: Up-Down-Down

RBMS1

1.774

0.953

0.821

Mlig455_026121 {REF} {Length: 2550} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=40.0]} {Human: ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [Score=106, Expect=1e-24]; ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [Score=102, Expect=5e-23]; ENSG00000076067, RBMS2, RNA binding motif single stranded interacting protein 2, [Score=102, Expect=4e-23]} {Mouse: ENSMUSG00000026970, Rbms1, RNA binding motif, single stranded interacting protein 1, [Score=110, Expect=4e-26]} {Dmel: FBgn0052423, shep, alan shepard, [Score=84.7, Expect=3e-17]} {Celegans: WBGene00006331, sup-26, SUPpressor, [Score=100, Expect=9e-23]} {Smed: dd_Smed_v6_3832_0_1, dd_Smed_v6_3832_0_1, [RH, Score=105, Expect=9e-25]} {RNA1310_39053} {RNA815_20087}

MligTC455_16621

1.02

Mlig455_020457

Neo: -

Age: Up-Down-Up

1.657

0.955

0.702

Mlig455_020457 {REF} {Length: 2984} {Pfam: Papain family cysteine protease [PF00112.25, score=19.4]} {RNA1509_11606} {RNA1310_6063.3} {RNA815_1093}