M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_41590

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_41590 33 0.69 Mlig455_012997

Neo: -

Age: Down-Down-Up

 B4GALT7 Mlig455_012997 {REF} {Length: 1785} {Pfam: N-terminal domain of galactosyltransferase [PF02709.16, score=74.9]; N-terminal region of glycosyl transferase group 7 [PF13733.8, score=59.3]} {Human: ENSG00000027847, B4GALT7, beta-1,4-galactosyltransferase 7, [RH, Score=235, Expect=1e-75]} {Mouse: ENSMUSG00000021504, B4galt7, xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I), [RH, Score=238, Expect=4e-77]} {Dmel: FBgn0039258, beta4GalT7, beta-4-galactosyltransferase 7, [RH, Score=212, Expect=4e-67]} {Celegans: WBGene00005021, sqv-3, Xylosylprotein 4-beta-galactosyltransferase, [RH, Score=216, Expect=2e-69]} {Smed: dd_Smed_v6_17053_0_1, dd_Smed_v6_17053_0_1, [RH, Score=238, Expect=2e-78]} {RNA1509_54585} {RNA1310_29740.2} {RNA815_17125}

Cumulative graph for MligTC455_41590

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.628 1.154 1.00000 1.00000
RegionR2 2.379 1.154 0.12358 0.43553
RegionR3 1.893 1.154 0.10887 0.57488
RegionR4 0.08 1.154 0.77571 1.00000
RegionR5 -1.13 1.154 0.95070 1.00000
RegionR6 0.345 1.154 0.68475 1.00000
RegionR7 2.765 1.154 0.07325 0.52191
RegionR8 -2.703 1.154 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.564 1.154 0.99983 1.00000
RegenerationR2 -1.735 1.154 0.14456 0.57602
RegenerationR3 0.354 1.154 0.68786 0.94330
RegenerationR4 -1.472 1.154 0.23627 0.68548
RegenerationR5 2.278 1.154 0.02937 0.28835
RegenerationR6 -1.083 1.154 0.46683 0.78227
RegenerationBL 1.431 1.154 0.47989 0.84523
RegenerationTP 2.345 1.154 0.29607 0.74126


Genes with expression patterns similar to MligTC455_41590

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_41590 33 0.69 Mlig455_012997

Neo: -

Age: Down-Down-Up

 B4GALT7 5 1.000 1.000 1.000 - 1.000 1.000 Mlig455_012997 {REF} {Length: 1785} {Pfam: N-terminal domain of galactosyltransferase [PF02709.16, score=74.9]; N-terminal region of glycosyl transferase group 7 [PF13733.8, score=59.3]} {Human: ENSG00000027847, B4GALT7, beta-1,4-galactosyltransferase 7, [RH, Score=235, Expect=1e-75]} {Mouse: ENSMUSG00000021504, B4galt7, xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I), [RH, Score=238, Expect=4e-77]} {Dmel: FBgn0039258, beta4GalT7, beta-4-galactosyltransferase 7, [RH, Score=212, Expect=4e-67]} {Celegans: WBGene00005021, sqv-3, Xylosylprotein 4-beta-galactosyltransferase, [RH, Score=216, Expect=2e-69]} {Smed: dd_Smed_v6_17053_0_1, dd_Smed_v6_17053_0_1, [RH, Score=238, Expect=2e-78]} {RNA1509_54585} {RNA1310_29740.2} {RNA815_17125}
2. MligTC455_41873 36 0.75 Mlig455_012326

Neo: -

Age: Up-Down-Down

 1 - - 1.000 - - - Mlig455_012326 {REF} {Length: 2256} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=70.5, Expect=9e-14]} {Celegans: WBGene00008559, F07H5.8, [Score=50.8, Expect=2e-07]} {RNA1310_39433} {RNA815_32396}
3. MligTC455_38552 90 1.88 Mlig455_036316

Neo: -

Age: logFC(26M/2M)=-0.471

 0.999 - - 0.999 - - - Mlig455_036316 {REF} {Length: 1808} {Smed: dd_Smed_v6_28638_0_1, dd_Smed_v6_28638_0_1, [RH, Score=47.4, Expect=1e-06]} {RNA1509_49824} {RNA1310_24515.2} {RNA815_20644}
4. MligTC455_09718 14 0.29 Mlig455_004083

Neo: -

Age: logFC(26M/2M)=-0.635

 0.998 - - 0.998 - - - Mlig455_004083 {REF} {Length: 1001} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_38392} {RNA1310_86878}
5. MligTC455_11722 10 0.21 Mlig455_017551

Neo: -

Age: -

 ASIC5 0.998 - - 0.998 - - - Mlig455_017551 {REF} {Length: 1968} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=199.9]} {Human: ENSG00000256394, ASIC5, acid sensing ion channel subunit family member 5, [Score=65.9, Expect=1e-10]} {Mouse: ENSMUSG00000030340, Scnn1a, sodium channel, nonvoltage-gated 1 alpha, [Score=69.7, Expect=5e-12]} {Celegans: WBGene00006748, unc-8, Degenerin unc-8, [Score=73.2, Expect=2e-13]} {Smed: dd_Smed_v6_34707_0_1, dd_Smed_v6_34707_0_1, [Score=95.1, Expect=2e-20]} {RNA1310_93171}
6. MligTC455_13689 23 0.48 Mlig455_023564

Neo: -

Age: -

 0.998 - - 0.998 - - - Mlig455_023564 {REF} {Length: 763} {NoTransDecoderORF} {RNA1509_46849} {RNA1310_101607} {RNA815_4228.1}
7. MligTC455_15015 39 0.8 Mlig455_007568

Neo: -

Age: Down-Up-Up

 LHX3 0.998 - - 0.998 - - - Mlig455_007568 {REF} {Length: 2000} {Pfam: LIM domain [PF00412.24, score=113.8]; Homeodomain [PF00046.31, score=69.9]; Homeobox KN domain [PF05920.13, score=20.4]; Anti-sigma-K factor rskA [PF10099.11, score=18.9]} {Human: ENSG00000107187, LHX3, LIM homeobox 3, [RH, Score=319, Expect=6e-106]; ENSG00000121454, LHX4, LIM homeobox 4, [RH, Score=311, Expect=1e-102]} {Mouse: ENSMUSG00000026934, Lhx3, LIM homeobox protein 3, [RH, Score=320, Expect=4e-106]; ENSMUSG00000026468, Lhx4, LIM homeobox protein 4, [RH, Score=311, Expect=7e-103]} {Dmel: FBgn0002023, Lim3, [RH, Score=323, Expect=7e-106]} {Celegans: WBGene00000438, ceh-14, Homeobox protein ceh-14, [RH, Score=268, Expect=9e-87]} {Smed: dd_Smed_v6_20755_0_1, dd_Smed_v6_20755_0_1, [RH, Score=328, Expect=4e-111]} {RNA1310_33977} {RNA815_27636}
8. MligTC455_27914 110 2.29 Mlig455_041696

Neo: -

Age: -

 0.998 - - 0.998 - - - Mlig455_041696 {REF} {Length: 2609} {NoTransDecoderORF} {RNA1509_48204} {RNA1310_38888.1} {RNA815_62436}
9. MligTC455_34539 68 1.42 Mlig455_065631

Neo: -

Age: Down-Down-Up

 0.998 - - 0.998 - - - Mlig455_065631 {REF} {Length: 2069} {Pfam: Immunoglobulin domain [PF13927.8, score=34.0]; Immunoglobulin I-set domain [PF07679.18, score=26.7]; Immunoglobulin domain [PF00047.27, score=25.6]; Immunoglobulin domain [PF13895.8, score=23.9]} {RNA1509_31635} {RNA1310_20892.1} {RNA815_37895}
10. MligTC455_19125 28 0.59 Mlig455_060303

Neo: -

Age: -

 NPFFR1 0.992 - - 0.992 - - - Mlig455_060303 {REF} {Length: 2812} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=114.1]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=23.2]} {Human: ENSG00000148734, NPFFR1, neuropeptide FF receptor 1, [Score=91.3, Expect=4e-19]; ENSG00000137252, HCRTR2, hypocretin receptor 2, [Score=88.6, Expect=3e-18]} {Mouse: ENSMUSG00000038071, Npy6r, neuropeptide Y receptor Y6, [Score=105, Expect=2e-24]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=130, Expect=1e-32]} {Celegans: WBGene00003808, npr-2, NeuroPeptide Receptor family, [Score=100, Expect=7e-23]} {Smed: dd_Smed_v6_26109_0_1, dd_Smed_v6_26109_0_1, [RH, Score=211, Expect=1e-61]} {RNA1509_34547} {RNA1310_9062} {RNA815_6805}
11. MligTC455_27065 40 0.83 Mlig455_022934

Neo: Int S/G2/M

Age: -

 0.991 - - 0.991 - - - Mlig455_022934 {REF} {Length: 1923} {NoTransDecoderORF} {RNA1509_28510} {RNA1310_68838} {RNA815_48322}
12. MligTC455_50731 121 2.51 Mlig455_065010

Neo: -

Age: Down-Up-Down

Region-enriched R7: 3.709/0.00994

 TRABD2B 0.99 - - 0.990 - - - Mlig455_065010 {REF} {Length: 1805} {Pfam: TraB/PrgY/gumN family [PF01963.19, score=145.5]} {Human: ENSG00000269113, TRABD2B, TraB domain containing 2B, [RH, Score=155, Expect=3e-41]; ENSG00000186854, TRABD2A, TraB domain containing 2A, [RH, Score=153, Expect=7e-42]} {Mouse: ENSMUSG00000070867, Trabd2b, TraB domain containing 2B, [RH, Score=161, Expect=1e-43]} {Celegans: WBGene00007351, C05G5.5, Metalloprotease TIKI homolog, [RH, Score=138, Expect=3e-36]} {RNA1310_36764} {RNA815_32656}
13. MligTC455_35687 15 0.32 Mlig455_038836

Neo: -

Age: -

 0.988 - - 0.988 - - - Mlig455_038836 {REF} {Length: 2774} {RNA1509_23775} {RNA1310_6695.1} {RNA815_5748.1}
14. MligTC455_22304 58 1.21 Mlig455_005828

Neo: -

Age: -

 ZNFX1 0.984 - - 0.984 - - - Mlig455_005828 {REF} {Length: 7532} {Pfam: AAA domain [PF13086.8, score=90.3]; AAA domain [PF13245.8, score=34.9]; AAA domain [PF13604.8, score=27.5]; PhoH-like protein [PF02562.18, score=21.8]; AAA domain [PF13401.8, score=20.3]} {Human: ENSG00000124201, ZNFX1, zinc finger NFX1-type containing 1, [Score=132, Expect=2e-31]} {Mouse: ENSMUSG00000039501, Znfx1, zinc finger, NFX1-type containing 1, [Score=124, Expect=9e-29]} {Dmel: FBgn0039165, CG6204, [Score=100, Expect=3e-21]} {Celegans: WBGene00014208, ZK1067.2, [Score=96.3, Expect=4e-20]} {Smed: dd_Smed_v6_2581_0_1, dd_Smed_v6_2581_0_1, [Score=143, Expect=5e-35]} {RNA1509_44728} {RNA1310_282.2} {RNA815_251.1}
15. MligTC455_25819 68 1.41 Mlig455_006265, Mlig455_006266

Neo: -

Age: -

 IRX1 0.981 - - 0.981 - - -

Mlig455_006265 {REF} {Length: 2122} {Pfam: Homeobox KN domain [PF05920.13, score=54.3]; Homeodomain [PF00046.31, score=31.9]} {Human: ENSG00000170549, IRX1, iroquois homeobox 1, [RH, Score=137, Expect=2e-35]} {Mouse: ENSMUSG00000060969, Irx1, Iroquois homeobox 1, [RH, Score=139, Expect=3e-36]} {Dmel: FBgn0015919, caup, caupolican, [Score=148, Expect=1e-38]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=117, Expect=5e-29]} {Smed: dd_Smed_v6_11500_0_1, dd_Smed_v6_11500_0_1, [Score=159, Expect=1e-44]} {RNA1310_84478}

Mlig455_006266 {REF} {Length: 1355} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=41.6, Expect=1e-05]} {RNA1509_58615} {RNA1310_9333.2} {RNA815_2042.1}
16. MligTC455_39262 106 2.2 Mlig455_047835

Neo: -

Age: Up-Down-Down

 NALCN 0.974 - - 0.974 - - - Mlig455_047835 {REF} {Length: 7474} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=295.4]} {Human: ENSG00000102452, NALCN, sodium leak channel, non-selective, [Score=1250, Expect=0.0]} {Mouse: ENSMUSG00000000197, Nalcn, sodium leak channel, non-selective, [Score=1255, Expect=0.0]} {Dmel: FBgn0002917, na, narrow abdomen, [Score=1264, Expect=0.0]} {Celegans: WBGene00006809, unc-77, Four domain-type voltage-gated ion channel alpha-1 subunit, [Score=1012, Expect=0.0]} {Smed: dd_Smed_v6_7314_0_1, dd_Smed_v6_7314_0_1, [Score=1380, Expect=0.0]} {RNA1509_44333} {RNA1310_7866.2} {RNA815_2697}
17. MligTC455_50294 12 0.26 Mlig455_056671

Neo: -

Age: -

 PLEKHG7 0.974 - - 0.974 - - - Mlig455_056671 {REF} {Length: 2786} {Pfam: RhoGEF domain [PF00621.22, score=80.0]; Pleckstrin homology domain [PF16652.7, score=45.3]} {Human: ENSG00000187510, PLEKHG7, pleckstrin homology and RhoGEF domain containing G7, [Score=263, Expect=7e-77]} {Mouse: ENSMUSG00000039713, Plekhg5, pleckstrin homology domain containing, family G (with RhoGef domain) member 5, [Score=122, Expect=4e-28]} {Dmel: FBgn0261556, CG42674, [Score=94.7, Expect=1e-19]} {Celegans: WBGene00022391, Y95B8A.12, [Score=295, Expect=4e-90]} {Smed: dd_Smed_v6_16856_0_1, dd_Smed_v6_16856_0_1, [Score=582, Expect=0.0]} {RNA1310_36890} {RNA815_64753}
18. MligTC455_31764 62 1.28 Mlig455_006258

Neo: -

Age: Down-Down-Up

Region-enriched R8: 4.078/0.01607

 LMNA 0.973 - - 0.973 - - - Mlig455_006258 {REF} {Length: 2636} {Pfam: Intermediate filament protein [PF00038.23, score=111.4]} {Human: ENSG00000160789, LMNA, lamin A/C, [Score=87.8, Expect=7e-18]; ENSG00000026025, VIM, vimentin, [Score=84.7, Expect=4e-17]} {Mouse: ENSMUSG00000028063, Lmna, lamin A, [Score=86.3, Expect=2e-17]; ENSMUSG00000026728, Vim, vimentin, [Score=85.5, Expect=2e-17]; ENSMUSG00000095241, Gm5478, predicted pseudogene 5478, [Score=82.8, Expect=2e-16]} {Dmel: FBgn0010397, LamC, Lamin C, [Score=93.6, Expect=5e-20]} {Celegans: WBGene00002050, ifa-1, Intermediate filament protein ifa-1, [Score=165, Expect=1e-44]} {Smed: dd_Smed_v6_3871_0_1, dd_Smed_v6_3871_0_1, [Score=190, Expect=6e-54]} {RNA1509_56508} {RNA1310_5840} {RNA815_9167}
19. MligTC455_40364 19 0.4 Mlig455_038354

Neo: -

Age: -

 0.973 - - 0.973 - - - Mlig455_038354 {REF} {Length: 2608} {RNA1509_57598} {RNA1310_48414} {RNA815_41099}
20. MligTC455_09500 21 0.45 Mlig455_026734

Neo: -

Age: -

 0.972 - - 0.972 - - - Mlig455_026734 {REF} {Length: 2668} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=142.4]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=57.4, Expect=3e-08]} {Smed: dd_Smed_v6_18385_0_1, dd_Smed_v6_18385_0_1, [Score=246, Expect=6e-73]} {RNA1509_19376} {RNA1310_47426} {RNA815_43225}
21. MligTC455_48185 70 1.45 Mlig455_035439

Neo: -

Age: -

 0.971 - - 0.971 - - - Mlig455_035439 {REF} {Length: 2757} {RNA1310_13118.1} {RNA815_17949}
22. MligTC455_11297 26 0.54 Mlig455_057378

Neo: -

Age: -

 0.969 - - 0.969 - - - Mlig455_057378 {REF} {Length: 795}
23. MligTC455_11298 26 0.54 Mlig455_057401

Neo: -

Age: -

 0.969 - - 0.969 - - - Mlig455_057401 {REF} {Length: 793}
24. MligTC455_04504 40 0.84 Mlig455_032284, Mlig455_068485

Neo: -

Age: -

 0.967 - - 0.967 - - -

Mlig455_032284 {REF} {Length: 1663} {RNA1509_54673} {RNA1310_17397} {RNA815_18930}

Mlig455_068485 {REF} {Length: 2377} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=61.5]; F-box domain [PF00646.35, score=40.3]} {Mouse: ENSMUSG00000039753, Fbxl5, F-box and leucine-rich repeat protein 5, [Score=53.5, Expect=5e-07]} {Smed: dd_Smed_v6_12894_0_1, dd_Smed_v6_12894_0_1, [RH, Score=61.2, Expect=6e-10]} {RNA1509_54673} {RNA1310_17397, RNA1509_54673} {RNA1509_54673, RNA815_18930}
25. MligTC455_11299 24 0.5 Mlig455_059556

Neo: -

Age: -

 0.967 - - 0.967 - - - Mlig455_059556 {REF} {Length: 793}
26. MligTC455_40686 55 1.14 Mlig455_066331

Neo: -

Age: -

 0.967 - - 0.967 - - - Mlig455_066331 {REF} {Length: 557} {RNA1509_41547} {RNA1310_104300} {RNA815_38127.2}
27. MligTC455_50389 19 0.39 Mlig455_059799

Neo: -

Age: -

 0.967 - - 0.967 - - - Mlig455_059799 {REF} {Length: 1159} {Pfam: LIM domain [PF00412.24, score=54.9]} {Dmel: FBgn0085354, CG34325, [Score=55.1, Expect=6e-09]} {RNA1310_54844} {RNA815_43129}
28. MligTC455_11395 28 0.59 Mlig455_048035

Neo: -

Age: -

 RASL10B 0.966 - - 0.966 - - - Mlig455_048035 {REF} {Length: 2464} {Pfam: Ras family [PF00071.24, score=93.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=38.8]; ADP-ribosylation factor family [PF00025.23, score=23.1]} {Human: ENSG00000270885, RASL10B, RAS like family 10 member B, [Score=148, Expect=5e-44]} {Mouse: ENSMUSG00000020684, Rasl10b, RAS-like, family 10, member B, [Score=149, Expect=3e-44]} {Dmel: FBgn0037326, CG14669, [Score=115, Expect=2e-30]} {Celegans: WBGene00004307, rap-1, Ras-related protein Rap-1, [Score=81.3, Expect=9e-19]} {Smed: dd_Smed_v6_13540_0_1, dd_Smed_v6_13540_0_1, [Score=164, Expect=2e-49]}
29. MligTC455_10764 5 0.1 Mlig455_048950

Neo: -

Age: -

 0.965 - - 0.965 - - - Mlig455_048950 {REF} {Length: 278} {NoTransDecoderORF} {RNA1509_56237} {RNA1310_59534.2} {RNA815_29807}
30. MligTC455_12585 12 0.25 Mlig455_060954

Neo: -

Age: -

 0.965 - - 0.965 - - - Mlig455_060954 {REF} {Length: 1268} {RNA1509_19240} {RNA1310_136} {RNA815_1141}
31. MligTC455_13540 51 1.07 Mlig455_064494

Neo: -

Age: -

Regeneration-upregulated R4: 5.584

Regeneration-enriched R4: 5.584

 CSNK1A1 0.965 - - 0.965 - - - Mlig455_064494 {REF} {Length: 5219} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=84.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=51.2]; Fungal protein kinase [PF17667.3, score=34.5]} {Human: ENSG00000113712, CSNK1A1, casein kinase 1 alpha 1, [Score=524, Expect=0.0]; ENSG00000180138, CSNK1A1L, casein kinase 1 alpha 1 like, [Score=498, Expect=1e-171]} {Mouse: ENSMUSG00000024576, Csnk1a1, casein kinase 1, alpha 1, [Score=524, Expect=0.0]} {Dmel: FBgn0015024, CkIalpha, Casein kinase Ialpha, [Score=465, Expect=5e-159]} {Celegans: WBGene00002202, kin-19, Casein kinase I isoform alpha, [Score=500, Expect=1e-172]} {Smed: dd_Smed_v6_1225_0_1, dd_Smed_v6_1225_0_1, [RH, Score=541, Expect=0.0]} {RNA1509_14375} {RNA1310_21526.1} {RNA815_12957}
32. MligTC455_34280 20 0.42 Mlig455_056987

Neo: -

Age: -

 ZIM3 0.965 - - 0.965 - - - Mlig455_056987 {REF} {Length: 2474} {Pfam: C2H2-type zinc-finger domain [PF13909.8, score=45.1]; Zinc-finger double domain [PF13465.8, score=20.9]} {Human: ENSG00000141946, ZIM3, zinc finger imprinted 3, [Score=55.5, Expect=2e-07]; ENSG00000175213, ZNF408, zinc finger protein 408, [Score=55.5, Expect=2e-07]; ENSG00000113916, BCL6, B cell CLL/lymphoma 6, [Score=54.7, Expect=4e-07]; ENSG00000181666, HKR1, HKR1, GLI-Kruppel zinc finger family member, [Score=54.7, Expect=4e-07]; ENSG00000283034, ZNF445, zinc finger protein 445, [Score=53.1, Expect=1e-06]; ENSG00000124782, RREB1, ras responsive element binding protein 1, [Score=53.1, Expect=2e-06]; ENSG00000185219, ZNF445, zinc finger protein 445, [Score=53.1, Expect=1e-06]; ENSG00000112365, ZBTB24, zinc finger and BTB domain containing 24, [Score=52.8, Expect=2e-06]; ENSG00000170631, ZNF16, zinc finger protein 16, [Score=52.8, Expect=1e-06]} {Mouse: ENSMUSG00000075040, Zfp408, zinc finger protein 408, [Score=60.5, Expect=5e-09]} {Dmel: FBgn0262160, CG9932, [RH, Score=66.2, Expect=7e-11]} {Smed: dd_Smed_v6_36433_0_1, dd_Smed_v6_36433_0_1, [RH, Score=175, Expect=2e-48]} {RNA1509_19024} {RNA1310_47342} {RNA815_39699}
33. MligTC455_33394 29 0.6 Mlig455_020353, Mlig455_041292

Neo: -

Age: -

 RASGRP1, RASGRP3 0.963 - - 0.963 - - -

Mlig455_020353 {REF} {Length: 2230} {Pfam: RasGEF domain [PF00617.21, score=61.8]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=51.4]; EF hand [PF00036.34, score=33.2]; EF-hand domain [PF13405.8, score=32.5]; EF-hand domain pair [PF13499.8, score=28.5]; EF hand [PF13202.8, score=28.0]} {Human: ENSG00000152689, RASGRP3, RAS guanyl releasing protein 3, [Score=360, Expect=2e-115]; ENSG00000172575, RASGRP1, RAS guanyl releasing protein 1, [Score=349, Expect=6e-110]} {Mouse: ENSMUSG00000071042, Rasgrp3, RAS, guanyl releasing protein 3, [Score=356, Expect=2e-114]} {Dmel: FBgn0003093, Pkc98E, Protein C kinase 98E, [Score=65.1, Expect=9e-11]} {Celegans: WBGene00009100, rgef-1, Rap Guanine nucleotide Exchange Factor homolog, [Score=302, Expect=3e-94]} {Smed: dd_Smed_v6_15742_0_2, dd_Smed_v6_15742_0_2, [Score=270, Expect=3e-85]} {RNA1310_83329}

Mlig455_041292 {REF} {Length: 3588} {Pfam: RasGEF domain [PF00617.21, score=145.2]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=52.4]; EF hand [PF00036.34, score=34.0]; EF-hand domain [PF13405.8, score=33.3]; EF-hand domain pair [PF13499.8, score=30.9]; EF hand [PF13202.8, score=29.5]; EF-hand domain pair [PF13833.8, score=19.2]} {Human: ENSG00000172575, RASGRP1, RAS guanyl releasing protein 1, [RH, Score=451, Expect=8e-148]} {Mouse: ENSMUSG00000071042, Rasgrp3, RAS, guanyl releasing protein 3, [RH, Score=453, Expect=2e-150]; ENSMUSG00000027347, Rasgrp1, RAS guanyl releasing protein 1, [RH, Score=438, Expect=3e-143]} {Dmel: FBgn0034158, CG5522, [Score=95.9, Expect=3e-20]} {Celegans: WBGene00009100, rgef-1, Rap Guanine nucleotide Exchange Factor homolog, [Score=416, Expect=2e-136]} {Smed: dd_Smed_v6_15742_0_2, dd_Smed_v6_15742_0_2, [RH, Score=288, Expect=3e-91]} {RNA1509_53196} {RNA1310_34349} {RNA815_31634}
34. MligTC455_54332 77 1.61 Mlig455_067675

Neo: -

Age: Up-Down-Down

 BMP1 0.963 - - 0.963 - - - Mlig455_067675 {REF} {Length: 4231} {Pfam: CUB domain [PF00431.22, score=166.3]} {Human: ENSG00000168487, BMP1, bone morphogenetic protein 1, [Score=75.5, Expect=3e-13]} {Mouse: ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [Score=79.3, Expect=2e-14]} {Dmel: FBgn0261262, CG42613, [Score=90.1, Expect=4e-18]} {Celegans: WBGene00004944, sol-1, Suppressor of lurcher protein 1, [RH, Score=75.5, Expect=9e-14]} {Smed: dd_Smed_v6_19493_0_1, dd_Smed_v6_19493_0_1, [Score=258, Expect=1e-73]} {RNA1509_49729} {RNA1310_14031} {RNA815_23434}
35. MligTC455_25948 26 0.53 Mlig455_020747

Neo: -

Age: -

 0.96 - - 0.960 - - - Mlig455_020747 {REF} {Length: 891} {TRANSSPLICED} {RNA1509_54816} {RNA1310_68154} {RNA815_23085.1}
36. MligTC455_54036 254 5.29 Mlig455_048173, Mlig455_048196

Neo: -

Age: logFC(26M/2M)=1.000

Region-enriched R8: 3.438/0.03106

 CALML3 0.956 - - 0.956 - - -

Mlig455_048173 {REF} {Length: 1339} {Pfam: EF hand [PF00036.34, score=85.0]; EF-hand domain pair [PF13499.8, score=75.7]; EF hand [PF13202.8, score=68.3]; EF-hand domain [PF13405.8, score=67.2]; EF-hand domain pair [PF13833.8, score=55.1]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=19.5]} {Human: ENSG00000178363, CALML3, calmodulin like 3, [Score=83.2, Expect=1e-20]; ENSG00000143933, CALM2, calmodulin 2, [Score=80.1, Expect=2e-19]; ENSG00000160014, CALM3, calmodulin 3, [Score=80.1, Expect=2e-19]; ENSG00000198668, CALM1, calmodulin 1, [Score=80.1, Expect=2e-19]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=81.6, Expect=3e-20]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=80.1, Expect=1e-19]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=80.1, Expect=1e-19]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=80.1, Expect=1e-19]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=77.8, Expect=6e-19]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=77.8, Expect=5e-19]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=77.8, Expect=4e-19]} {RNA1509_44750} {RNA1310_63281} {RNA815_19875}

Mlig455_048196 {REF} {Length: 1514} {Pfam: EF hand [PF00036.34, score=85.0]; EF-hand domain pair [PF13499.8, score=75.7]; EF hand [PF13202.8, score=68.3]; EF-hand domain [PF13405.8, score=67.2]; EF-hand domain pair [PF13833.8, score=55.1]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=19.5]} {Human: ENSG00000178363, CALML3, calmodulin like 3, [Score=83.2, Expect=1e-20]; ENSG00000143933, CALM2, calmodulin 2, [Score=80.1, Expect=2e-19]; ENSG00000160014, CALM3, calmodulin 3, [Score=80.1, Expect=2e-19]; ENSG00000198668, CALM1, calmodulin 1, [Score=80.1, Expect=2e-19]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=81.6, Expect=3e-20]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=80.1, Expect=1e-19]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=80.1, Expect=1e-19]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=80.1, Expect=1e-19]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=77.8, Expect=6e-19]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=77.8, Expect=5e-19]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=77.8, Expect=4e-19]} {RNA1509_44750} {RNA1310_63281, RNA1509_44750} {RNA1509_44750, RNA815_19875}
37. MligTC455_19124 68 1.41 Mlig455_056714

Neo: -

Age: Up-Down-Up

 NPFFR1 0.952 - - 0.952 - - - Mlig455_056714 {REF} {Length: 3702} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=113.2]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=23.3]} {Human: ENSG00000148734, NPFFR1, neuropeptide FF receptor 1, [Score=90.1, Expect=1e-18]; ENSG00000137252, HCRTR2, hypocretin receptor 2, [Score=87.8, Expect=6e-18]} {Mouse: ENSMUSG00000038071, Npy6r, neuropeptide Y receptor Y6, [Score=105, Expect=2e-24]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=131, Expect=7e-33]} {Celegans: WBGene00003808, npr-2, NeuroPeptide Receptor family, [Score=100, Expect=1e-22]} {Smed: dd_Smed_v6_26109_0_1, dd_Smed_v6_26109_0_1, [RH, Score=210, Expect=4e-61]} {RNA1509_34547} {RNA1310_9062, RNA1509_34547} {RNA1509_34547, RNA815_6805}
38. MligTC455_27619 143 2.98 Mlig455_056970

Neo: -

Age: -

 ZMYND11 0.951 - - 0.951 - - - Mlig455_056970 {REF} {Length: 2861} {TRANSSPLICED} {Pfam: PWWP domain [PF00855.19, score=34.9]} {Human: ENSG00000015171, ZMYND11, zinc finger MYND-type containing 11, [RH, Score=259, Expect=8e-76]} {Mouse: ENSMUSG00000021156, Zmynd11, zinc finger, MYND domain containing 11, [RH, Score=258, Expect=1e-76]} {Dmel: FBgn0039863, CG1815, [Score=119, Expect=7e-27]} {Celegans: WBGene00000262, bra-1, BMP Receptor Associated protein family, [RH, Score=90.9, Expect=1e-20]} {Smed: dd_Smed_v6_9896_0_1, dd_Smed_v6_9896_0_1, [RH, Score=358, Expect=1e-109]} {RNA1509_8467} {RNA1310_5971.1, RNA1509_8467} {RNA1509_8467, RNA815_4233}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA