TomoSeq data search

Data search

Results for MligTC455_41637

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_41637	432	9.01	Mlig455_039092, Mlig455_042783	Neo: - Age: -		Mlig455_039092 {REF} {Length: 2496} {TRANSSPLICED} {RNA1509_8669} {RNA1310_10192.1} {RNA815_11321.2} Mlig455_042783 {REF} {Length: 2404} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52889} {RNA1310_9786.1} {RNA815_11321.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_41637

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.305	3.462	0.36776	1.00000
RegionR2	1.056	3.462	0.08263	0.35260
RegionR3	-0.218	3.462	0.69335	1.00000
RegionR4	0.57	3.462	0.32014	0.63688
RegionR5	-0.343	3.462	0.51634	0.87895
RegionR6	0.608	3.462	0.24370	0.82893
RegionR7	-0.18	3.462	0.79413	1.00000
RegionR8	-0.187	3.462	0.82354	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.161	3.462	0.51473	1.00000
RegenerationR2	-0.422	3.462	0.41748	0.82574
RegenerationR3	0.342	3.462	0.57601	0.89703
RegenerationR4	0.153	3.462	0.79182	0.98438
RegenerationR5	-0.249	3.462	0.67431	0.94272
RegenerationR6	-0.492	3.462	0.41373	0.74664
RegenerationBL	-1.369	3.462	0.10019	0.37214
RegenerationTP	0.795	3.462	0.26168	0.70940

Genes with expression patterns similar to MligTC455_41637

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41637	432	9.01	Mlig455_039092, Mlig455_042783	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_039092 {REF} {Length: 2496} {TRANSSPLICED} {RNA1509_8669} {RNA1310_10192.1} {RNA815_11321.2} Mlig455_042783 {REF} {Length: 2404} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52889} {RNA1310_9786.1} {RNA815_11321.1}
2.	MligTC455_40806	171	3.55	Mlig455_033654	Neo: - Age: logFC(26M/2M)=0.419 Region-enriched R2: 2.021/0.04596	TIAM2	1.671	-	0.717	-	-	0.954	-	Mlig455_033654 {REF} {Length: 4486} {Pfam: RhoGEF domain [PF00621.22, score=117.0]; PDZ domain [PF17820.3, score=31.1]; PDZ domain [PF00595.26, score=30.7]; Raf-like Ras-binding domain [PF02196.17, score=22.9]; PDZ domain [PF13180.8, score=20.6]} {Human: ENSG00000146426, TIAM2, T cell lymphoma invasion and metastasis 2, [RH, Score=302, Expect=2e-84]; ENSG00000156299, TIAM1, T cell lymphoma invasion and metastasis 1, [RH, Score=298, Expect=3e-83]} {Mouse: ENSMUSG00000023800, Tiam2, T cell lymphoma invasion and metastasis 2, [RH, Score=301, Expect=3e-84]; ENSMUSG00000002489, Tiam1, T cell lymphoma invasion and metastasis 1, [RH, Score=295, Expect=2e-82]} {Dmel: FBgn0085447, sif, still life, [RH, Score=403, Expect=2e-118]} {Celegans: WBGene00015704, tiam-1, TIAM (Mammalian Tumor Invasion And Metastasis factor) homolog, [RH, Score=101, Expect=1e-21]} {Smed: dd_Smed_v6_4803_0_1, dd_Smed_v6_4803_0_1, [Score=68.6, Expect=1e-11]} {RNA1509_45743} {RNA1310_5656.1} {RNA815_9341}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_41637

432

9.01

Mlig455_039092, Mlig455_042783

Neo: -

Age: -

1.000

Mlig455_039092 {REF} {Length: 2496} {TRANSSPLICED} {RNA1509_8669} {RNA1310_10192.1} {RNA815_11321.2}

Mlig455_042783 {REF} {Length: 2404} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52889} {RNA1310_9786.1} {RNA815_11321.1}

MligTC455_40806

171

3.55

Mlig455_033654

Neo: -

Age: logFC(26M/2M)=0.419

Region-enriched R2: 2.021/0.04596

TIAM2

1.671

0.717

0.954

Mlig455_033654 {REF} {Length: 4486} {Pfam: RhoGEF domain [PF00621.22, score=117.0]; PDZ domain [PF17820.3, score=31.1]; PDZ domain [PF00595.26, score=30.7]; Raf-like Ras-binding domain [PF02196.17, score=22.9]; PDZ domain [PF13180.8, score=20.6]} {Human: ENSG00000146426, TIAM2, T cell lymphoma invasion and metastasis 2, [RH, Score=302, Expect=2e-84]; ENSG00000156299, TIAM1, T cell lymphoma invasion and metastasis 1, [RH, Score=298, Expect=3e-83]} {Mouse: ENSMUSG00000023800, Tiam2, T cell lymphoma invasion and metastasis 2, [RH, Score=301, Expect=3e-84]; ENSMUSG00000002489, Tiam1, T cell lymphoma invasion and metastasis 1, [RH, Score=295, Expect=2e-82]} {Dmel: FBgn0085447, sif, still life, [RH, Score=403, Expect=2e-118]} {Celegans: WBGene00015704, tiam-1, TIAM (Mammalian Tumor Invasion And Metastasis factor) homolog, [RH, Score=101, Expect=1e-21]} {Smed: dd_Smed_v6_4803_0_1, dd_Smed_v6_4803_0_1, [Score=68.6, Expect=1e-11]} {RNA1509_45743} {RNA1310_5656.1} {RNA815_9341}