Data search
Results for MligTC455_41685
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41685 | 220 | 4.59 | Mlig455_047202 | Neo: Int S/G2/M Age: Down-Down-Up |
MSH4 | Mlig455_047202 {REF} {Length: 3023} {TRANSSPLICED} {Pfam: MutS domain III [PF05192.20, score=81.4]; MutS domain V [PF00488.23, score=23.9]} {Human: ENSG00000057468, MSH4, mutS homolog 4, [Score=181, Expect=2e-46]} {Mouse: ENSMUSG00000005493, Msh4, mutS homolog 4, [Score=177, Expect=2e-45]} {Celegans: WBGene00001872, him-14, MutS protein homolog him-14, [Score=78.6, Expect=1e-14]} {Smed: dd_Smed_v6_23954_0_1, dd_Smed_v6_23954_0_1, [RH, Score=201, Expect=2e-55]} {RNA1509_36615} {RNA1310_12005, RNA1509_36615} {RNA1509_36615, RNA815_12845} |
Cumulative graph for MligTC455_41685
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.18 | 2.719 | 0.92123 | 1.00000 | |
| RegionR2 | -0.31 | 2.719 | 0.75217 | 1.00000 | |
| RegionR3 | -0.403 | 2.719 | 0.63452 | 1.00000 | |
| RegionR4 | 0.469 | 2.719 | 0.52918 | 0.85334 | |
| RegionR5 | 1.291 | 2.719 | 0.04559 | 0.17535 | |
| RegionR6 | -0.153 | 2.719 | 0.86087 | 1.00000 | |
| RegionR7 | -0.354 | 2.719 | 0.75325 | 1.00000 | |
| RegionR8 | -0.72 | 2.719 | 0.61421 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.586 | 2.719 | 0.29140 | 0.98947 | |
| RegenerationR2 | 2.182 | 2.719 | 0.00790 | 0.14167 | |
| RegenerationR3 | 1.959 | 2.719 | 0.03268 | 0.32279 | |
| RegenerationR4 | 0.951 | 2.719 | 0.25903 | 0.70710 | |
| RegenerationR5 | 0.884 | 2.719 | 0.24219 | 0.67589 | |
| RegenerationR6 | 1.695 | 2.719 | 0.05507 | 0.29427 | |
| RegenerationBL | -0.955 | 2.719 | 0.51698 | 0.87961 | |
| RegenerationTP | 1.744 | 2.719 | 0.12086 | 0.52988 |
Genes with expression patterns similar to MligTC455_41685
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41685 | 220 | 4.59 | Mlig455_047202 | Neo: Int S/G2/M Age: Down-Down-Up |
MSH4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_047202 {REF} {Length: 3023} {TRANSSPLICED} {Pfam: MutS domain III [PF05192.20, score=81.4]; MutS domain V [PF00488.23, score=23.9]} {Human: ENSG00000057468, MSH4, mutS homolog 4, [Score=181, Expect=2e-46]} {Mouse: ENSMUSG00000005493, Msh4, mutS homolog 4, [Score=177, Expect=2e-45]} {Celegans: WBGene00001872, him-14, MutS protein homolog him-14, [Score=78.6, Expect=1e-14]} {Smed: dd_Smed_v6_23954_0_1, dd_Smed_v6_23954_0_1, [RH, Score=201, Expect=2e-55]} {RNA1509_36615} {RNA1310_12005, RNA1509_36615} {RNA1509_36615, RNA815_12845} |
| 2. | MligTC455_22629 | 203 | 4.23 | Mlig455_012599 | Neo: - Age: - |
CAPZB | 1.818 | - | 0.950 | - | - | - | 0.868 | Mlig455_012599 {REF} {Length: 1813} {TRANSSPLICED} {Pfam: F-actin capping protein, beta subunit [PF01115.19, score=273.0]} {Human: ENSG00000077549, CAPZB, capping actin protein of muscle Z-line subunit beta, [Score=278, Expect=4e-93]} {Mouse: ENSMUSG00000028745, Capzb, capping protein (actin filament) muscle Z-line, beta, [Score=278, Expect=2e-93]} {Dmel: FBgn0011570, cpb, capping protein beta, [Score=273, Expect=1e-91]} {Celegans: WBGene00000293, cap-2, F-actin-capping protein subunit beta, [Score=253, Expect=8e-84]} {Smed: dd_Smed_v6_1165_0_1, dd_Smed_v6_1165_0_1, [Score=281, Expect=4e-95]} {RNA1509_26511} {RNA1310_18322.2} {RNA815_12071} |
| 3. | MligTC455_17948 | 407 | 8.49 | Mlig455_053925, Mlig455_060566 | Neo: Irradiation Age: - Region-enriched R5: 2.149/0.00051 |
1.729 | 0.772 | - | - | - | 0.957 | - | Mlig455_053925 {REF} {Length: 1351} {TRANSSPLICED} {Pfam: Transmembrane proteins 230/134 [PF05915.14, score=64.4]} {Dmel: FBgn0035285, CG12025, [RH, Score=61.6, Expect=5e-12]} {RNA1509_55220} {RNA1310_14992.1} {RNA815_11576} Mlig455_060566 {REF} {Length: 1132} {TRANSSPLICED} {Pfam: Transmembrane proteins 230/134 [PF05915.14, score=64.4]} {Dmel: FBgn0035285, CG12025, [RH, Score=61.6, Expect=5e-12]} {RNA1509_55220} {RNA1310_14992.1} {RNA815_11576} |
|
| 4. | MligTC455_15736 | 207 | 4.3 | Mlig455_067413 | Neo: - Age: Up-Up-Down |
SGMS1 | 0.957 | - | - | 0.957 | - | - | - | Mlig455_067413 {REF} {Length: 2926} {Pfam: PAP2 superfamily C-terminal [PF14360.8, score=83.5]} {Human: ENSG00000198964, SGMS1, sphingomyelin synthase 1, [RH, Score=207, Expect=1e-61]; ENSG00000164023, SGMS2, sphingomyelin synthase 2, [RH, Score=199, Expect=5e-59]} {Mouse: ENSMUSG00000040451, Sgms1, sphingomyelin synthase 1, [RH, Score=206, Expect=4e-61]; ENSMUSG00000116143, Sgms2, sphingomyelin synthase 2, [RH, Score=201, Expect=1e-59]; ENSMUSG00000050931, Sgms2, sphingomyelin synthase 2, [RH, Score=201, Expect=1e-59]} {Dmel: FBgn0052380, SMSr, [RH, Score=171, Expect=1e-46]} {Celegans: WBGene00004892, sms-1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, [RH, Score=204, Expect=5e-60]} {Smed: dd_Smed_v6_11976_0_2, dd_Smed_v6_11976_0_2, [RH, Score=170, Expect=4e-48]} {RNA1509_21942, RNA1509_26778} {RNA1310_9001, RNA1509_21942, RNA1509_26778} {RNA1509_21942, RNA1509_26778, RNA815_13690} |
| 5. | MligTC455_27527 | 72 | 1.5 | Mlig455_054019 | Neo: - Age: - |
0.957 | - | - | 0.957 | - | - | - | Mlig455_054019 {REF} {Length: 2118} {NoTransDecoderORF} {RNA1509_52534} {RNA1310_66032} {RNA815_43240} | |
| 6. | MligTC455_37104 | 146 | 3.05 | Mlig455_026653, Mlig455_039048, Mlig455_052213 | Neo: - Age: - |
0.955 | - | - | 0.955 | - | - | - | Mlig455_026653 {REF} {Length: 2643} {Pfam: Flavin adenine dinucleotide (FAD)-dependent sulfhydryl oxidase [PF18371.3, score=23.2]} {RNA1509_49031} {RNA1310_34323} {RNA815_33771.1} Mlig455_039048 {REF} {Length: 1239} {Pfam: Chordin-like protein 1/2 C-terminal [PF19548.1, score=23.1]} {RNA1509_49031} {RNA1310_23076.1} {RNA815_54937} Mlig455_052213 {REF} {Length: 593} {RNA1509_49031} {RNA1310_97783} {RNA815_54937} |
|
| 7. | MligTC455_41089 | 735 | 15.3 | Mlig455_035979, Mlig455_047643 | Neo: Int S/G2/M Age: - |
CARNMT1 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_035979 {REF} {Length: 2063} {TRANSSPLICED} {Pfam: N2227-like protein [PF07942.14, score=347.9]; Methyltransferase domain [PF13489.8, score=18.4]} {Human: ENSG00000156017, CARNMT1, carnosine N-methyltransferase 1, [RH, Score=369, Expect=5e-125]} {Mouse: ENSMUSG00000024726, Carnmt1, carnosine N-methyltransferase 1, [RH, Score=385, Expect=1e-131]} {Dmel: FBgn0023522, CG11596, [RH, Score=293, Expect=2e-95]} {Celegans: WBGene00013015, Y48E1C.2, [RH, Score=298, Expect=2e-98]} {Smed: dd_Smed_v6_6356_0_1, dd_Smed_v6_6356_0_1, [RH, Score=387, Expect=5e-133]} {RNA1509_11867} {RNA1310_24632.1} {RNA815_11932} Mlig455_047643 {REF} {Length: 2023} {TRANSSPLICED} {Pfam: N2227-like protein [PF07942.14, score=344.8]} {Human: ENSG00000156017, CARNMT1, carnosine N-methyltransferase 1, [RH, Score=363, Expect=2e-123]} {Mouse: ENSMUSG00000024726, Carnmt1, carnosine N-methyltransferase 1, [RH, Score=376, Expect=1e-128]} {Dmel: FBgn0023522, CG11596, [RH, Score=288, Expect=7e-94]} {Celegans: WBGene00013015, Y48E1C.2, [RH, Score=296, Expect=2e-98]} {Smed: dd_Smed_v6_6356_0_1, dd_Smed_v6_6356_0_1, [RH, Score=392, Expect=1e-135]} {RNA1509_11867} {RNA1310_24632.1} {RNA815_11932} |