TomoSeq data search

Data search

Results for MligTC455_41689

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_41689	942	19.62	Mlig455_003771, Mlig455_003783, Mlig455_054341	Neo: - Age: Up-Down-Down	ATF2	Mlig455_003771 {REF} {Length: 1164} {Pfam: bZIP transcription factor [PF00170.23, score=44.5]; Basic region leucine zipper [PF07716.17, score=29.8]; bZIP Maf transcription factor [PF03131.19, score=27.1]} {Human: ENSG00000115966, ATF2, activating transcription factor 2, [Score=59.3, Expect=1e-09]} {Mouse: ENSMUSG00000027104, Atf2, activating transcription factor 2, [Score=58.5, Expect=2e-09]} {Dmel: FBgn0001291, Jra, Jun-related antigen, [Score=63.2, Expect=3e-11]} {Celegans: WBGene00001345, fos-1, Transcription factor fos-1, [Score=52.0, Expect=2e-07]} {RNA1509_25460} {RNA1310_31359} {RNA815_16412} Mlig455_003783 {REF} {Length: 1163} {Pfam: bZIP transcription factor [PF00170.23, score=44.5]; Basic region leucine zipper [PF07716.17, score=29.8]; bZIP Maf transcription factor [PF03131.19, score=26.2]} {Human: ENSG00000115966, ATF2, activating transcription factor 2, [Score=59.3, Expect=1e-09]} {Mouse: ENSMUSG00000027104, Atf2, activating transcription factor 2, [Score=58.5, Expect=2e-09]} {Dmel: FBgn0001291, Jra, Jun-related antigen, [Score=63.9, Expect=2e-11]} {Celegans: WBGene00001345, fos-1, Transcription factor fos-1, [Score=52.0, Expect=2e-07]} {RNA1509_25460} {RNA1310_31359, RNA1509_25460} {RNA1509_25460, RNA815_16412} Mlig455_054341 {REF} {Length: 1163} {Pfam: bZIP transcription factor [PF00170.23, score=44.5]; Basic region leucine zipper [PF07716.17, score=29.8]; bZIP Maf transcription factor [PF03131.19, score=26.2]} {Human: ENSG00000115966, ATF2, activating transcription factor 2, [Score=59.3, Expect=1e-09]} {Mouse: ENSMUSG00000027104, Atf2, activating transcription factor 2, [Score=58.5, Expect=2e-09]} {Dmel: FBgn0001291, Jra, Jun-related antigen, [Score=63.9, Expect=2e-11]} {Celegans: WBGene00001345, fos-1, Transcription factor fos-1, [Score=52.0, Expect=2e-07]} {RNA1509_25460} {RNA1310_31359} {RNA815_16412}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41689

942

19.62

Mlig455_003771, Mlig455_003783, Mlig455_054341

Neo: -

Age: Up-Down-Down

ATF2

Mlig455_003771 {REF} {Length: 1164} {Pfam: bZIP transcription factor [PF00170.23, score=44.5]; Basic region leucine zipper [PF07716.17, score=29.8]; bZIP Maf transcription factor [PF03131.19, score=27.1]} {Human: ENSG00000115966, ATF2, activating transcription factor 2, [Score=59.3, Expect=1e-09]} {Mouse: ENSMUSG00000027104, Atf2, activating transcription factor 2, [Score=58.5, Expect=2e-09]} {Dmel: FBgn0001291, Jra, Jun-related antigen, [Score=63.2, Expect=3e-11]} {Celegans: WBGene00001345, fos-1, Transcription factor fos-1, [Score=52.0, Expect=2e-07]} {RNA1509_25460} {RNA1310_31359} {RNA815_16412}

Mlig455_003783 {REF} {Length: 1163} {Pfam: bZIP transcription factor [PF00170.23, score=44.5]; Basic region leucine zipper [PF07716.17, score=29.8]; bZIP Maf transcription factor [PF03131.19, score=26.2]} {Human: ENSG00000115966, ATF2, activating transcription factor 2, [Score=59.3, Expect=1e-09]} {Mouse: ENSMUSG00000027104, Atf2, activating transcription factor 2, [Score=58.5, Expect=2e-09]} {Dmel: FBgn0001291, Jra, Jun-related antigen, [Score=63.9, Expect=2e-11]} {Celegans: WBGene00001345, fos-1, Transcription factor fos-1, [Score=52.0, Expect=2e-07]} {RNA1509_25460} {RNA1310_31359, RNA1509_25460} {RNA1509_25460, RNA815_16412}

Mlig455_054341 {REF} {Length: 1163} {Pfam: bZIP transcription factor [PF00170.23, score=44.5]; Basic region leucine zipper [PF07716.17, score=29.8]; bZIP Maf transcription factor [PF03131.19, score=26.2]} {Human: ENSG00000115966, ATF2, activating transcription factor 2, [Score=59.3, Expect=1e-09]} {Mouse: ENSMUSG00000027104, Atf2, activating transcription factor 2, [Score=58.5, Expect=2e-09]} {Dmel: FBgn0001291, Jra, Jun-related antigen, [Score=63.9, Expect=2e-11]} {Celegans: WBGene00001345, fos-1, Transcription factor fos-1, [Score=52.0, Expect=2e-07]} {RNA1509_25460} {RNA1310_31359} {RNA815_16412}

Cumulative graph for MligTC455_41689

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.276	4.596	0.01010	0.29332
RegionR2	1.169	4.596	0.03956	0.23097
RegionR3	1.148	4.596	0.01687	0.21301
RegionR4	0.744	4.596	0.16375	0.42354
RegionR5	0.52	4.596	0.27502	0.60127
RegionR6	0.751	4.596	0.12894	0.64922
RegionR7	-0.57	4.596	0.34836	0.98562
RegionR8	-0.487	4.596	0.47083	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.896	4.596	0.25477	0.96756
RegenerationR2	-0.105	4.596	0.83882	1.00000
RegenerationR3	0.387	4.596	0.47002	0.84404
RegenerationR4	0.007	4.596	0.98887	1.00000
RegenerationR5	-0.433	4.596	0.42469	0.81420
RegenerationR6	-0.752	4.596	0.19037	0.52827
RegenerationBL	-2.689	4.596	0.00119	0.02570
RegenerationTP	1.637	4.596	0.00456	0.11253

Genes with expression patterns similar to MligTC455_41689

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41689	942	19.62	Mlig455_003771, Mlig455_003783, Mlig455_054341	Neo: - Age: Up-Down-Down	ATF2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_003771 {REF} {Length: 1164} {Pfam: bZIP transcription factor [PF00170.23, score=44.5]; Basic region leucine zipper [PF07716.17, score=29.8]; bZIP Maf transcription factor [PF03131.19, score=27.1]} {Human: ENSG00000115966, ATF2, activating transcription factor 2, [Score=59.3, Expect=1e-09]} {Mouse: ENSMUSG00000027104, Atf2, activating transcription factor 2, [Score=58.5, Expect=2e-09]} {Dmel: FBgn0001291, Jra, Jun-related antigen, [Score=63.2, Expect=3e-11]} {Celegans: WBGene00001345, fos-1, Transcription factor fos-1, [Score=52.0, Expect=2e-07]} {RNA1509_25460} {RNA1310_31359} {RNA815_16412} Mlig455_003783 {REF} {Length: 1163} {Pfam: bZIP transcription factor [PF00170.23, score=44.5]; Basic region leucine zipper [PF07716.17, score=29.8]; bZIP Maf transcription factor [PF03131.19, score=26.2]} {Human: ENSG00000115966, ATF2, activating transcription factor 2, [Score=59.3, Expect=1e-09]} {Mouse: ENSMUSG00000027104, Atf2, activating transcription factor 2, [Score=58.5, Expect=2e-09]} {Dmel: FBgn0001291, Jra, Jun-related antigen, [Score=63.9, Expect=2e-11]} {Celegans: WBGene00001345, fos-1, Transcription factor fos-1, [Score=52.0, Expect=2e-07]} {RNA1509_25460} {RNA1310_31359, RNA1509_25460} {RNA1509_25460, RNA815_16412} Mlig455_054341 {REF} {Length: 1163} {Pfam: bZIP transcription factor [PF00170.23, score=44.5]; Basic region leucine zipper [PF07716.17, score=29.8]; bZIP Maf transcription factor [PF03131.19, score=26.2]} {Human: ENSG00000115966, ATF2, activating transcription factor 2, [Score=59.3, Expect=1e-09]} {Mouse: ENSMUSG00000027104, Atf2, activating transcription factor 2, [Score=58.5, Expect=2e-09]} {Dmel: FBgn0001291, Jra, Jun-related antigen, [Score=63.9, Expect=2e-11]} {Celegans: WBGene00001345, fos-1, Transcription factor fos-1, [Score=52.0, Expect=2e-07]} {RNA1509_25460} {RNA1310_31359} {RNA815_16412}
2.	MligTC455_29088	121	2.52	Mlig455_018225, Mlig455_020848, Mlig455_062213	Neo: - Age: -		0.97	-	-	-	-	0.970	-	Mlig455_018225 {REF} {Length: 2763} {Pfam: Integrase core domain [PF00665.28, score=36.8]} {Smed: dd_Smed_v6_11155_0_5, dd_Smed_v6_11155_0_5, [Score=57.4, Expect=3e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1} Mlig455_020848 {REF} {Length: 204} {NoTransDecoderORF} {RNA1310_16838} {RNA815_16228} Mlig455_062213 {REF} {Length: 182} {NoTransDecoderORF} {RNA1310_16838} {RNA815_16228}
3.	MligTC455_27003	147	3.06	Mlig455_020285	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_020285 {REF} {Length: 2159} {Pfam: Integrase core domain [PF00665.28, score=39.4]} {RNA1509_6282} {RNA1310_617} {RNA815_3663}
4.	MligTC455_49587	217	4.52	Mlig455_070355	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.859		0.96	-	-	-	-	0.960	-	Mlig455_070355 {REF} {Length: 2001} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=36.1]; Prokaryotic RING finger family 4 [PF14447.8, score=23.9]} {RNA1509_9323} {RNA1310_15784.1} {RNA815_1092}
5.	MligTC455_53433	6029	125.61	Mlig455_004542, Mlig455_064733	Neo: - Age: Down-Up-Up	RSPH4A	0.956	-	-	-	-	-	0.956	Mlig455_004542 {REF} {Length: 1911} {TRANSSPLICED} {Pfam: Radial spokehead-like protein [PF04712.14, score=619.5]} {Human: ENSG00000111834, RSPH4A, radial spoke head component 4A, [RH, Score=442, Expect=4e-148]} {Mouse: ENSMUSG00000039552, Rsph4a, radial spoke head 4 homolog A (Chlamydomonas), [Score=448, Expect=2e-150]} {Dmel: FBgn0034957, CG3121, [Score=227, Expect=6e-66]} {Smed: dd_Smed_v6_5346_0_1, dd_Smed_v6_5346_0_1, [RH, Score=454, Expect=1e-155]} {RNA1509_6840} {RNA1310_12717.2} {RNA815_4800.1} Mlig455_064733 {REF} {Length: 1911} {TRANSSPLICED} {Pfam: Radial spokehead-like protein [PF04712.14, score=619.5]} {Human: ENSG00000111834, RSPH4A, radial spoke head component 4A, [RH, Score=442, Expect=4e-148]} {Mouse: ENSMUSG00000039552, Rsph4a, radial spoke head 4 homolog A (Chlamydomonas), [Score=448, Expect=2e-150]} {Dmel: FBgn0034957, CG3121, [Score=227, Expect=6e-66]} {Smed: dd_Smed_v6_5346_0_1, dd_Smed_v6_5346_0_1, [RH, Score=454, Expect=1e-155]} {RNA1509_6840} {RNA1310_12717.2} {RNA815_4800.1}
6.	MligTC455_15815	168	3.49	Mlig455_016990	Neo: - Age: Up-Up-Down		0.954	-	-	-	-	0.954	-	Mlig455_016990 {REF} {Length: 1221} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=31.2]} {RNA1310_21380} {RNA815_8662}
7.	MligTC455_36171	63	1.32	Mlig455_004205, Mlig455_004217, Mlig455_018952	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_004205 {REF} {Length: 6288} {RNA1509_25192} {RNA1310_12769.1} {RNA815_30119} Mlig455_004217 {REF} {Length: 172} {NoTransDecoderORF} {RNA1310_104512} Mlig455_018952 {REF} {Length: 201} {NoTransDecoderORF} {RNA1509_49809} {RNA1310_56694.2} {RNA815_21617.1}
8.	MligTC455_34354	1250	26.04	Mlig455_041299, Mlig455_056201	Neo: - Age: - Regeneration-downregulated BL: -2.125 Regeneration-depleted BL: -2.125	DYNLRB2	0.951	-	-	-	-	0.951	-	Mlig455_041299 {REF} {Length: 5797} {TRANSSPLICED} {Pfam: Roadblock/LC7 domain [PF03259.19, score=82.2]} {Human: ENSG00000168589, DYNLRB2, dynein light chain roadblock-type 2, [RH, Score=137, Expect=9e-43]} {Mouse: ENSMUSG00000034467, Dynlrb2, dynein light chain roadblock-type 2, [RH, Score=136, Expect=3e-43]} {Dmel: FBgn0024196, robl, roadblock, [RH, Score=135, Expect=5e-43]} {Celegans: WBGene00012004, dyrb-1, Dynein light chain roadblock, [RH, Score=101, Expect=1e-29]} {Smed: dd_Smed_v6_1126_0_1, dd_Smed_v6_1126_0_1, [RH, Score=144, Expect=2e-46]} {RNA1509_28728, RNA1509_41581} {RNA1310_30473, RNA1509_41581} {RNA1509_41581, RNA815_14022} Mlig455_056201 {REF} {Length: 1126} {TRANSSPLICED} {Pfam: Roadblock/LC7 domain [PF03259.19, score=82.2]} {Human: ENSG00000168589, DYNLRB2, dynein light chain roadblock-type 2, [RH, Score=137, Expect=9e-43]} {Mouse: ENSMUSG00000034467, Dynlrb2, dynein light chain roadblock-type 2, [RH, Score=136, Expect=3e-43]} {Dmel: FBgn0024196, robl, roadblock, [RH, Score=135, Expect=5e-43]} {Celegans: WBGene00012004, dyrb-1, Dynein light chain roadblock, [RH, Score=101, Expect=1e-29]} {Smed: dd_Smed_v6_1126_0_1, dd_Smed_v6_1126_0_1, [RH, Score=144, Expect=2e-46]} {RNA1509_28728} {RNA1310_30473, RNA1509_28728} {RNA1509_28728, RNA815_14022}