Data search
Results for MligTC455_41732
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41732 | 61 | 1.27 | Mlig455_030756 | Neo: - Age: - |
Mlig455_030756 {REF} {Length: 2457} {Celegans: WBGene00019479, K07C11.7, UPF0046 protein K07C11.7, [Score=47.4, Expect=1e-05]} {RNA1509_15168} {RNA1310_11530} {RNA815_4956.1} |
Cumulative graph for MligTC455_41732
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.939 | 1.4 | 1.00000 | 1.00000 | |
| RegionR2 | -0.742 | 1.4 | 0.91477 | 1.00000 | |
| RegionR3 | -0.321 | 1.4 | 0.84012 | 1.00000 | |
| RegionR4 | 1.637 | 1.4 | 0.33155 | 0.64978 | |
| RegionR5 | 1.328 | 1.4 | 0.23094 | 0.53776 | |
| RegionR6 | 1.054 | 1.4 | 0.37821 | 0.95853 | |
| RegionR7 | -3.467 | 1.4 | 1.00000 | 1.00000 | |
| RegionR8 | 2.45 | 1.4 | 0.19489 | 0.79004 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 4.531 | 1.4 | 0.43444 | 1.00000 | |
| RegenerationR2 | -0.336 | 1.4 | 0.68362 | 0.95001 | |
| RegenerationR3 | 0.316 | 1.4 | 0.82929 | 0.99040 | |
| RegenerationR4 | -0.54 | 1.4 | 0.73938 | 0.96738 | |
| RegenerationR5 | 0.157 | 1.4 | 0.94031 | 1.00000 | |
| RegenerationR6 | -1.646 | 1.4 | 0.12206 | 0.42990 | |
| RegenerationBL | -0.635 | 1.4 | 0.87427 | 1.00000 | |
| RegenerationTP | -0.99 | 1.4 | 0.88649 | 1.00000 |
Genes with expression patterns similar to MligTC455_41732
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41732 | 61 | 1.27 | Mlig455_030756 | Neo: - Age: - |
5 | 1.000 | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_030756 {REF} {Length: 2457} {Celegans: WBGene00019479, K07C11.7, UPF0046 protein K07C11.7, [Score=47.4, Expect=1e-05]} {RNA1509_15168} {RNA1310_11530} {RNA815_4956.1} | |
| 2. | MligTC455_25052 | 180 | 3.74 | Mlig455_029793 | Neo: - Age: Up-Down-Down |
HERC2 | 0.971 | - | - | - | 0.971 | - | - | Mlig455_029793 {REF} {Length: 16855} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=518.2]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=184.0]; HECT-domain (ubiquitin-transferase) [PF00632.27, score=180.6]; Mib_herc2 [PF06701.15, score=64.9]; Mouse development and cellular proliferation protein Cullin-7 [PF11515.10, score=63.4]; Zinc finger, ZZ type [PF00569.19, score=26.4]; Cytochrome b5-like Heme/Steroid binding domain [PF00173.30, score=23.5]} {Human: ENSG00000128731, HERC2, HECT and RLD domain containing E3 ubiquitin protein ligase 2, [RH, Score=2195, Expect=0.0]} {Mouse: ENSMUSG00000030451, Herc2, HECT and RLD domain containing E3 ubiquitin protein ligase 2, [RH, Score=2200, Expect=0.0]} {Dmel: FBgn0031107, HERC2, HECT and RLD domain containing protein 2, [RH, Score=1271, Expect=0.0]} {Celegans: WBGene00022358, Y92H12A.2, E3 ubiquitin-protein ligase, [Score=116, Expect=3e-26]} {Smed: dd_Smed_v6_3885_0_1, dd_Smed_v6_3885_0_1, [RH, Score=1098, Expect=0.0]} {RNA1509_2217, RNA1509_26920} {RNA1310_95.1, RNA1509_2217, RNA1509_26920} {RNA1509_2217, RNA1509_26920, RNA815_620} |
| 3. | MligTC455_29761 | 117 | 2.44 | Mlig455_013621 | Neo: - Age: - Region-enriched R4: 3.464/0.00365 |
BEST1 | 0.967 | 0.967 | - | - | - | - | - | Mlig455_013621 {REF} {Length: 8372} {TRANSSPLICED} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=182.0]} {Human: ENSG00000167995, BEST1, bestrophin 1, [Score=124, Expect=1e-29]; ENSG00000142959, BEST4, bestrophin 4, [Score=124, Expect=5e-30]; ENSG00000127325, BEST3, bestrophin 3, [Score=118, Expect=1e-27]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [Score=143, Expect=1e-36]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=228, Expect=3e-66]} {Celegans: WBGene00015288, best-4, Bestrophin homolog, [Score=173, Expect=2e-47]} {Smed: dd_Smed_v6_8073_0_1, dd_Smed_v6_8073_0_1, [Score=355, Expect=8e-118]} {RNA1509_54677} {RNA1310_17634} {RNA815_11997} |
| 4. | MligTC455_46773 | 154 | 3.21 | Mlig455_039273 | Neo: - Age: - |
ESRRG | 0.961 | 0.961 | - | - | - | - | - | Mlig455_039273 {REF} {Length: 3221} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=71.1]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=39.3]} {Human: ENSG00000196482, ESRRG, estrogen related receptor gamma, [Score=104, Expect=1e-23]; ENSG00000119715, ESRRB, estrogen related receptor beta, [Score=102, Expect=9e-23]} {Mouse: ENSMUSG00000021255, Esrrb, estrogen related receptor, beta, [Score=106, Expect=2e-24]; ENSMUSG00000026610, Esrrg, estrogen-related receptor gamma, [Score=104, Expect=9e-24]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=102, Expect=3e-23]} {Celegans: WBGene00006790, unc-55, UNC-55b isoform, [Score=77.8, Expect=2e-15]} {Smed: dd_Smed_v6_12699_0_1, dd_Smed_v6_12699_0_1, [Score=105, Expect=5e-24]} {RNA1509_57340} {RNA1310_21217, RNA1509_57340} {RNA1509_57340, RNA815_9073} |
| 5. | MligTC455_32507 | 70 | 1.46 | Mlig455_045946, Mlig455_045974 | Neo: - Age: - |
ANKRD28, TANC2 | 0.957 | 0.957 | - | - | - | - | - | Mlig455_045946 {REF} {Length: 5238} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=103.9]; Ankyrin repeats (many copies) [PF13637.8, score=84.5]; Ankyrin repeat [PF13606.8, score=60.9]; Ankyrin repeat [PF00023.32, score=55.3]; Ankyrin repeats (many copies) [PF13857.8, score=50.8]; Mab-21 protein [PF03281.16, score=35.4]} {Human: ENSG00000206560, ANKRD28, ankyrin repeat domain 28, [Score=71.2, Expect=8e-12]; ENSG00000170921, TANC2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=67.8, Expect=1e-10]} {Mouse: ENSMUSG00000053580, Tanc2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=67.8, Expect=9e-11]} {Dmel: FBgn0041096, rols, rolling pebbles, [Score=63.2, Expect=2e-09]} {Celegans: WBGene00011240, R11A8.7, Ankyrin repeat and KH domain-containing protein R11A8.7, [Score=56.6, Expect=1e-07]} {Smed: dd_Smed_v6_8675_0_1, dd_Smed_v6_8675_0_1, [Score=64.3, Expect=3e-10]} {RNA1509_16149} {RNA1310_1248} {RNA815_6874.1} Mlig455_045974 {REF} {Length: 5344} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=103.7]; Ankyrin repeats (many copies) [PF13637.8, score=84.1]; Ankyrin repeat [PF13606.8, score=60.5]; Ankyrin repeat [PF00023.32, score=55.0]; Ankyrin repeats (many copies) [PF13857.8, score=50.4]; Mab-21 protein [PF03281.16, score=35.3]} {Human: ENSG00000170921, TANC2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=67.8, Expect=1e-10]; ENSG00000039560, RAI14, retinoic acid induced 14, [Score=65.1, Expect=8e-10]} {Mouse: ENSMUSG00000053580, Tanc2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=67.8, Expect=9e-11]} {Dmel: FBgn0041096, rols, rolling pebbles, [Score=62.8, Expect=2e-09]} {Celegans: WBGene00011240, R11A8.7, Ankyrin repeat and KH domain-containing protein R11A8.7, [Score=56.6, Expect=1e-07]} {Smed: dd_Smed_v6_8675_0_1, dd_Smed_v6_8675_0_1, [Score=64.7, Expect=3e-10]} {RNA1509_16149} {RNA1310_1248} {RNA815_6874.1} |
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