Data search
Results for MligTC455_41756
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41756 | 1934 | 40.28 | Mlig455_036423 | Neo: - Age: Up-Down-Down |
Mlig455_036423 {REF} {Length: 1807} {Pfam: Thymosin beta-4 family [PF01290.22, score=118.1]} {Dmel: FBgn0026084, cib, ciboulot, [RH, Score=58.5, Expect=6e-11]} {Celegans: WBGene00006649, tth-1, Thymosin beta, [Score=45.8, Expect=3e-06]} {Smed: dd_Smed_v6_17_0_1, dd_Smed_v6_17_0_1, [Score=73.9, Expect=5e-17]} {RNA1509_2234} {RNA1310_19846.1} {RNA815_7395.2} |
Cumulative graph for MligTC455_41756
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.263 | 5.38 | 0.73380 | 1.00000 | |
| RegionR2 | 0.432 | 5.38 | 0.26612 | 0.64876 | |
| RegionR3 | 0.014 | 5.38 | 0.96413 | 1.00000 | |
| RegionR4 | 0.39 | 5.38 | 0.33583 | 0.65487 | |
| RegionR5 | -0.798 | 5.38 | 0.02129 | 0.10143 | |
| RegionR6 | -0.412 | 5.38 | 0.24198 | 0.82745 | |
| RegionR7 | -0.492 | 5.38 | 0.24063 | 0.86477 | |
| RegionR8 | 0.602 | 5.38 | 0.16355 | 0.73136 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.531 | 5.38 | 0.56268 | 1.00000 | |
| RegenerationR2 | 0.177 | 5.38 | 0.64095 | 0.93161 | |
| RegenerationR3 | -0.117 | 5.38 | 0.77782 | 0.97428 | |
| RegenerationR4 | -0.052 | 5.38 | 0.90224 | 1.00000 | |
| RegenerationR5 | 0.202 | 5.38 | 0.62861 | 0.92196 | |
| RegenerationR6 | 0.16 | 5.38 | 0.71046 | 0.93023 | |
| RegenerationBL | 0.219 | 5.38 | 0.60083 | 0.94760 | |
| RegenerationTP | 0.791 | 5.38 | 0.06485 | 0.41087 |
Genes with expression patterns similar to MligTC455_41756
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41756 | 1934 | 40.28 | Mlig455_036423 | Neo: - Age: Up-Down-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_036423 {REF} {Length: 1807} {Pfam: Thymosin beta-4 family [PF01290.22, score=118.1]} {Dmel: FBgn0026084, cib, ciboulot, [RH, Score=58.5, Expect=6e-11]} {Celegans: WBGene00006649, tth-1, Thymosin beta, [Score=45.8, Expect=3e-06]} {Smed: dd_Smed_v6_17_0_1, dd_Smed_v6_17_0_1, [Score=73.9, Expect=5e-17]} {RNA1509_2234} {RNA1310_19846.1} {RNA815_7395.2} | |
| 2. | MligTC455_41757 | 2210 | 46.04 | Mlig455_067601 | Neo: - Age: Down-Down-Up |
4.596 | 0.940 | 0.959 | 0.956 | - | 0.983 | 0.758 | Mlig455_067601 {REF} {Length: 2908} {Pfam: Thymosin beta-4 family [PF01290.22, score=118.1]} {Dmel: FBgn0026084, cib, ciboulot, [RH, Score=58.5, Expect=6e-11]} {Celegans: WBGene00006649, tth-1, Thymosin beta, [Score=45.8, Expect=3e-06]} {Smed: dd_Smed_v6_17_0_1, dd_Smed_v6_17_0_1, [Score=73.9, Expect=5e-17]} {RNA1509_2234, RNA1509_44322, RNA1509_48105, RNA1509_57771} {RNA1310_19846.1, RNA1509_2234, RNA1509_44322, RNA1509_48105, RNA1509_57771} {RNA1509_2234, RNA1509_44322, RNA1509_48105, RNA1509_57771, RNA815_7395.2} | |
| 3. | MligTC455_39069 | 2993 | 62.35 | Mlig455_015576 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.630 Region-enriched R4: 1.587/0.01937 |
GSTP1 | 3.249 | - | 0.755 | 0.754 | 0.952 | 0.788 | - | Mlig455_015576 {REF} {Length: 1025} {TRANSSPLICED} {Pfam: Glutathione S-transferase, C-terminal domain [PF14497.8, score=56.4]; Glutathione S-transferase, C-terminal domain [PF00043.27, score=34.2]; Glutathione S-transferase, N-terminal domain [PF13417.8, score=29.0]; Glutathione S-transferase, N-terminal domain [PF02798.22, score=27.6]; Glutathione S-transferase, N-terminal domain [PF13409.8, score=21.1]} {Human: ENSG00000084207, GSTP1, glutathione S-transferase pi 1, [RH, Score=148, Expect=2e-44]} {Mouse: ENSMUSG00000097830, Gstp1, glutathione S-transferase, pi 1, [RH, Score=150, Expect=2e-45]; ENSMUSG00000060803, Gstp1, glutathione S-transferase, pi 1, [RH, Score=150, Expect=2e-45]; ENSMUSG00000097808, Gstp2, glutathione S-transferase, pi 2, [RH, Score=148, Expect=2e-44]; ENSMUSG00000038155, Gstp2, glutathione S-transferase, pi 2, [RH, Score=148, Expect=2e-44]} {Dmel: FBgn0010226, GstS1, Glutathione S transferase S1, [RH, Score=95.9, Expect=5e-24]} {Celegans: WBGene00001773, gst-25, Glutathione S-Transferase, [RH, Score=143, Expect=5e-43]} {Smed: dd_Smed_v6_1517_0_2, dd_Smed_v6_1517_0_2, [RH, Score=89.7, Expect=4e-22]} {RNA1509_25680, RNA1509_27438, RNA1509_27889, RNA1509_33872} {RNA1310_32505, RNA1509_25680, RNA1509_27438, RNA1509_27889, RNA1509_33872} {RNA1509_25680, RNA1509_27438, RNA1509_27889, RNA1509_33872, RNA815_13954} |
| 4. | MligTC455_42579 | 1841 | 38.34 | Mlig455_061617 | Neo: - Age: - Region-enriched R7: 1.560/0.01513 Regeneration-downregulated BL: -2.445 Regeneration-depleted BL: -2.445 |
CAV2 | 3.2 | - | - | 0.763 | 0.719 | 0.974 | 0.744 | Mlig455_061617 {REF} {Length: 4295} {Pfam: Caveolin [PF01146.19, score=121.3]} {Human: ENSG00000105971, CAV2, caveolin 2, [Score=87.4, Expect=2e-22]} {Mouse: ENSMUSG00000000058, Cav2, caveolin 2, [Score=90.1, Expect=1e-23]} {Celegans: WBGene00000301, cav-1, Caveolin-1, [Score=73.2, Expect=1e-16]} {Smed: dd_Smed_v6_8555_0_1, dd_Smed_v6_8555_0_1, [Score=144, Expect=2e-45]} {RNA1509_24227} {RNA1310_41576, RNA1509_24227} {RNA1509_24227, RNA815_20166} |
| 5. | MligTC455_24063 | 339 | 7.06 | Mlig455_048182 | Neo: - Age: Down-Down-Up |
DYNLL1 | 2.596 | - | - | 0.826 | 0.810 | 0.960 | - | Mlig455_048182 {REF} {Length: 1157} {Pfam: Dynein light chain type 1 [PF01221.20, score=64.3]; EF hand [PF13202.8, score=43.3]; EF hand [PF00036.34, score=35.7]; EF-hand domain pair [PF13499.8, score=35.5]; EF-hand domain [PF13405.8, score=29.0]} {Human: ENSG00000088986, DYNLL1, dynein light chain LC8-type 1, [Score=60.1, Expect=1e-11]; ENSG00000264364, DYNLL2, dynein light chain LC8-type 2, [Score=60.1, Expect=1e-11]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=60.1, Expect=7e-12]; ENSMUSG00000020483, Dynll2, dynein light chain LC8-type 2, [Score=60.1, Expect=7e-12]; ENSMUSG00000064063, BC048507, cDNA sequence BC048507, [Score=58.9, Expect=2e-11]} {Dmel: FBgn0011760, ctp, cut up, [Score=57.0, Expect=7e-11]} {Celegans: WBGene00001005, dlc-1, Dynein light chain 1, cytoplasmic, [Score=57.0, Expect=5e-11]} {Smed: dd_Smed_v6_9661_0_1, dd_Smed_v6_9661_0_1, [RH, Score=153, Expect=2e-47]} {RNA1509_6272} {RNA1310_31271} {RNA815_14002} |
| 6. | MligTC455_14478 | 1231 | 25.64 | Mlig455_030165 | Neo: - Age: Down-Up-Down Region-enriched R8: 1.465/0.02814 |
2.413 | 0.727 | - | - | 0.733 | 0.953 | - | Mlig455_030165 {REF} {Length: 2156} {RNA1509_4043} {RNA1310_3308.1} {RNA815_1039.1} | |
| 7. | MligTC455_33860 | 384 | 8.01 | Mlig455_024990, Mlig455_025004 | Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.340 Region-enriched R2: 4.294/0.00006 |
2.369 | - | - | 0.705 | 0.711 | 0.953 | - | Mlig455_024990 {REF} {Length: 1540} {RNA1509_36587} {RNA1310_35553} {RNA815_21400} Mlig455_025004 {REF} {Length: 1546} {RNA1509_36587} {RNA1310_35553} {RNA815_21400} |
|
| 8. | MligTC455_52094 | 4020 | 83.75 | Mlig455_031829, Mlig455_047685 | Neo: - Age: - |
ANK3 | 1.883 | - | - | 0.962 | 0.921 | - | - | Mlig455_031829 {REF} {Length: 1078} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=95.2]; Ankyrin repeats (many copies) [PF13637.8, score=69.4]; Ankyrin repeats (many copies) [PF13857.8, score=56.4]; Ankyrin repeat [PF00023.32, score=51.7]; Ankyrin repeat [PF13606.8, score=42.0]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=69.3, Expect=4e-13]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=67.8, Expect=1e-12]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=65.9, Expect=3e-12]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=63.9, Expect=1e-11]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=66.2, Expect=2e-12]} {Smed: dd_Smed_v6_10099_0_1, dd_Smed_v6_10099_0_1, [RH, Score=116, Expect=2e-32]} {RNA1509_31784} {RNA1310_30615} {RNA815_15961} Mlig455_047685 {REF} {Length: 1075} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=95.2]; Ankyrin repeats (many copies) [PF13637.8, score=69.4]; Ankyrin repeats (many copies) [PF13857.8, score=56.4]; Ankyrin repeat [PF00023.32, score=51.7]; Ankyrin repeat [PF13606.8, score=42.0]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=69.3, Expect=4e-13]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=67.8, Expect=1e-12]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=65.9, Expect=3e-12]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=63.9, Expect=1e-11]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=66.2, Expect=2e-12]} {Smed: dd_Smed_v6_10099_0_1, dd_Smed_v6_10099_0_1, [RH, Score=116, Expect=2e-32]} {RNA1509_15359, RNA1509_31784, RNA1509_46865, RNA1509_49227, RNA1509_52013} {RNA1310_30615, RNA1509_15359, RNA1509_31784, RNA1509_46865, RNA1509_49227, RNA1509_52013} {RNA1509_15359, RNA1509_31784, RNA1509_46865, RNA1509_49227, RNA1509_52013, RNA815_15961} |
| 9. | MligTC455_49393 | 893 | 18.6 | Mlig455_003601 | Neo: - Age: - Region-enriched R2: 1.237/0.01562 Regeneration-downregulated BL: -2.400 Regeneration-depleted BL: -2.400 |
1.809 | - | - | 0.967 | - | 0.842 | - | Mlig455_003601 {REF} {Length: 910} {Pfam: Normal lung function maintenance, Low in Lung Cancer 1 protein [PF14945.8, score=24.4]} {Smed: dd_Smed_v6_6024_0_1, dd_Smed_v6_6024_0_1, [Score=98.6, Expect=5e-27]} {RNA1509_38038} {RNA1310_47454} {RNA815_24792.1} | |
| 10. | MligTC455_49806 | 1837 | 38.28 | Mlig455_014409 | Neo: - Age: - |
RAC3 | 1.786 | 0.814 | - | - | - | 0.972 | - | Mlig455_014409 {REF} {Length: 1644} {Pfam: Ras family [PF00071.24, score=146.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=78.3]; ADP-ribosylation factor family [PF00025.23, score=44.5]; Elongation factor Tu GTP binding domain [PF00009.29, score=27.5]} {Human: ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=140, Expect=2e-41]; ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=138, Expect=5e-41]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=137, Expect=1e-40]; ENSG00000070831, CDC42, cell division cycle 42, [Score=137, Expect=1e-40]; ENSG00000119729, RHOQ, ras homolog family member Q, [Score=135, Expect=2e-39]; ENSG00000177105, RHOG, ras homolog family member G, [Score=135, Expect=1e-39]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=135, Expect=1e-39]} {Mouse: ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=140, Expect=1e-41]; ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=138, Expect=3e-41]; ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=137, Expect=9e-41]; ENSMUSG00000073982, Rhog, ras homolog family member G, [Score=135, Expect=7e-40]; ENSMUSG00000024143, Rhoq, ras homolog family member Q, [Score=134, Expect=2e-39]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=134, Expect=1e-39]} {Dmel: FBgn0010333, Rac1, [Score=138, Expect=4e-41]} {Celegans: WBGene00003239, mig-2, Rac-like GTPase, [Score=145, Expect=6e-44]} {Smed: dd_Smed_v6_913_0_1, dd_Smed_v6_913_0_1, [Score=138, Expect=2e-41]} {RNA1509_14417, RNA1509_15579, RNA1509_32277} {RNA1310_34688.1, RNA1509_14417, RNA1509_15579, RNA1509_32277} {RNA1509_14417, RNA1509_15579, RNA1509_32277, RNA815_20638} |
| 11. | MligTC455_50603 | 1962 | 40.88 | Mlig455_004163 | Neo: - |
KLF1 | 1.714 | - | - | - | 0.952 | 0.762 | - | Mlig455_004163 {REF} {Length: 1380} {Pfam: Zinc-finger double domain [PF13465.8, score=38.4]; Zinc finger, C2H2 type [PF00096.28, score=37.1]; C2H2-type zinc ribbon [PF15909.7, score=27.5]; C2H2-type zinc finger [PF13894.8, score=23.7]} {Human: ENSG00000105610, KLF1, Kruppel like factor 1, [Score=129, Expect=2e-35]} {Mouse: ENSMUSG00000005148, Klf5, Kruppel-like factor 5, [Score=125, Expect=2e-33]; ENSMUSG00000054191, Klf1, Kruppel-like factor 1 (erythroid), [Score=123, Expect=4e-33]; ENSMUSG00000035397, Klf16, Kruppel-like factor 16, [Score=120, Expect=3e-33]; ENSMUSG00000025959, Klf7, Kruppel-like factor 7 (ubiquitous), [Score=119, Expect=6e-32]; ENSMUSG00000055148, Klf2, Kruppel-like factor 2 (lung), [Score=119, Expect=8e-32]; ENSMUSG00000003032, Klf4, Kruppel-like factor 4 (gut), [Score=119, Expect=4e-31]} {Dmel: FBgn0261705, CG42741, [Score=120, Expect=4e-32]} {Celegans: WBGene00009998, klf-2, Kruppel-Like Factor (Zinc finger protein), [Score=119, Expect=2e-32]} {Smed: dd_Smed_v6_12264_0_1, dd_Smed_v6_12264_0_1, [Score=115, Expect=8e-32]} {RNA1509_15597} {RNA1310_30263} {RNA815_14612} |
| 12. | MligTC455_29542 | 306 | 6.38 | Mlig455_034623 | Neo: - Age: - |
GABBR1 | 1.691 | - | - | 0.718 | - | 0.973 | - | Mlig455_034623 {REF} {Length: 9544} {Pfam: Receptor family ligand binding region [PF01094.30, score=123.6]} {Human: ENSG00000204681, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=112, Expect=4e-26]; ENSG00000232632, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=112, Expect=4e-26]; ENSG00000237051, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=112, Expect=4e-26]; ENSG00000206511, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=112, Expect=4e-26]; ENSG00000206466, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=112, Expect=4e-26]; ENSG00000232569, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=112, Expect=4e-26]; ENSG00000237112, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=112, Expect=4e-26]} {Mouse: ENSMUSG00000024462, Gabbr1, gamma-aminobutyric acid (GABA) B receptor, 1, [Score=115, Expect=4e-27]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=100, Expect=3e-22]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [Score=115, Expect=6e-28]} {Smed: dd_Smed_v6_20665_0_1, dd_Smed_v6_20665_0_1, [Score=92.4, Expect=6e-20]} {RNA1509_44701} {RNA1310_17404.1, RNA1509_44701} {RNA1509_44701, RNA815_5685.1} |
| 13. | MligTC455_20534 | 1868 | 38.91 | Mlig455_005305 | Neo: - Age: logFC(26M/2M)=-0.258 |
0.967 | - | - | - | - | - | 0.967 | Mlig455_005305 {REF} {Length: 2652} {Pfam: UPF0489 domain [PF12640.9, score=37.5]} {Smed: dd_Smed_v6_7217_0_1, dd_Smed_v6_7217_0_1, [RH, Score=53.5, Expect=3e-07]} {RNA1509_26295, RNA1509_3030, RNA1509_45201} {RNA1310_7798.1, RNA1509_26295, RNA1509_3030, RNA1509_45201} {RNA1509_26295, RNA1509_3030, RNA1509_45201, RNA815_2565.1} |
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