Data search
Results for MligTC455_41758
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41758 | 3054 | 63.62 | Mlig455_054595 | Neo: - Age: Down-Up-Down |
Mlig455_054595 {REF} {Length: 1656} {Pfam: Thymosin beta-4 family [PF01290.22, score=118.1]} {Dmel: FBgn0026084, cib, ciboulot, [RH, Score=58.5, Expect=6e-11]} {Celegans: WBGene00006649, tth-1, Thymosin beta, [Score=45.8, Expect=3e-06]} {Smed: dd_Smed_v6_17_0_1, dd_Smed_v6_17_0_1, [Score=73.9, Expect=5e-17]} {RNA1509_2234, RNA1509_28352} {RNA1310_19846.1, RNA1509_28352} {RNA1509_28352, RNA815_7395.2} |
Cumulative graph for MligTC455_41758
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.004 | 5.998 | 0.99502 | 1.00000 | |
| RegionR2 | 0.224 | 5.998 | 0.52668 | 0.89914 | |
| RegionR3 | 0.015 | 5.998 | 0.96149 | 1.00000 | |
| RegionR4 | 0.281 | 5.998 | 0.44761 | 0.77685 | |
| RegionR5 | -0.475 | 5.998 | 0.14027 | 0.38553 | |
| RegionR6 | 0.096 | 5.998 | 0.76137 | 1.00000 | |
| RegionR7 | -0.039 | 5.998 | 0.91168 | 1.00000 | |
| RegionR8 | -0.107 | 5.998 | 0.79135 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.35 | 5.998 | 0.63722 | 1.00000 | |
| RegenerationR2 | -0.074 | 5.998 | 0.84674 | 1.00000 | |
| RegenerationR3 | -0.155 | 5.998 | 0.70234 | 0.94835 | |
| RegenerationR4 | 0.102 | 5.998 | 0.80648 | 0.98842 | |
| RegenerationR5 | -0.507 | 5.998 | 0.21104 | 0.64504 | |
| RegenerationR6 | -0.249 | 5.998 | 0.53691 | 0.83109 | |
| RegenerationBL | 0.039 | 5.998 | 0.91734 | 1.00000 | |
| RegenerationTP | 0.455 | 5.998 | 0.25023 | 0.69749 |
Genes with expression patterns similar to MligTC455_41758
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41758 | 3054 | 63.62 | Mlig455_054595 | Neo: - Age: Down-Up-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_054595 {REF} {Length: 1656} {Pfam: Thymosin beta-4 family [PF01290.22, score=118.1]} {Dmel: FBgn0026084, cib, ciboulot, [RH, Score=58.5, Expect=6e-11]} {Celegans: WBGene00006649, tth-1, Thymosin beta, [Score=45.8, Expect=3e-06]} {Smed: dd_Smed_v6_17_0_1, dd_Smed_v6_17_0_1, [Score=73.9, Expect=5e-17]} {RNA1509_2234, RNA1509_28352} {RNA1310_19846.1, RNA1509_28352} {RNA1509_28352, RNA815_7395.2} | |
| 2. | MligTC455_34867 | 862 | 17.95 | Mlig455_005634 | Neo: - Age: - |
CALM2 | 1.799 | - | - | 0.980 | - | 0.819 | - | Mlig455_005634 {REF} {Length: 1515} {Pfam: EF hand [PF00036.34, score=124.8]; EF-hand domain pair [PF13499.8, score=117.9]; EF hand [PF13202.8, score=101.9]; EF-hand domain [PF13405.8, score=99.9]; EF-hand domain pair [PF13833.8, score=77.4]; Dockerin type I domain [PF00404.20, score=45.3]; EF-hand domain [PF14658.8, score=41.8]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=41.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=30.8]; EF-hand domain [PF08976.13, score=24.8]; Family of unknown function (DUF5580) [PF17743.3, score=19.3]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=140, Expect=7e-43]; ENSG00000160014, CALM3, calmodulin 3, [Score=140, Expect=7e-43]; ENSG00000198668, CALM1, calmodulin 1, [Score=140, Expect=7e-43]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=140, Expect=5e-43]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=140, Expect=5e-43]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=140, Expect=5e-43]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=134, Expect=7e-41]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=137, Expect=6e-42]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=138, Expect=1e-42]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=138, Expect=1e-42]} {RNA1509_40867} {RNA1310_49287} {RNA815_17221.2} |
| 3. | MligTC455_47669 | 793 | 16.52 | Mlig455_040755 | Neo: - Age: - Region-enriched R2: 1.568/0.00407 |
1.691 | - | - | - | 0.955 | 0.736 | - | Mlig455_040755 {REF} {Length: 8844} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=33.0]; Ankyrin repeats (many copies) [PF13637.8, score=21.8]} {RNA1509_15853} {RNA1310_18916} {RNA815_34185} | |
| 4. | MligTC455_26574 | 1008 | 21 | Mlig455_036012 | Neo: - Age: - Region-enriched R2: 1.522/0.03494 |
MAP3K19 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_036012 {REF} {Length: 2945} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=314.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=250.5]; Fungal protein kinase [PF17667.3, score=46.2]; Kinase-like [PF14531.8, score=44.9]; ABC1 atypical kinase-like domain [PF03109.18, score=30.3]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=136, Expect=1e-33]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=135, Expect=3e-33]} {Dmel: FBgn0024329, Mekk1, [Score=125, Expect=4e-29]} {Celegans: WBGene00006941, wnk-1, Serine/threonine-protein kinase WNK, [Score=110, Expect=9e-25]} {Smed: dd_Smed_v6_4849_0_2, dd_Smed_v6_4849_0_2, [Score=126, Expect=6e-30]} {RNA1509_1991, RNA1509_42299} {RNA1310_4947, RNA1509_1991, RNA1509_42299} {RNA1509_1991, RNA1509_42299, RNA815_3455} |
| 5. | MligTC455_29542 | 306 | 6.38 | Mlig455_034623 | Neo: - Age: - |
GABBR1 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_034623 {REF} {Length: 9544} {Pfam: Receptor family ligand binding region [PF01094.30, score=123.6]} {Human: ENSG00000204681, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=112, Expect=4e-26]; ENSG00000232632, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=112, Expect=4e-26]; ENSG00000237051, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=112, Expect=4e-26]; ENSG00000206511, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=112, Expect=4e-26]; ENSG00000206466, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=112, Expect=4e-26]; ENSG00000232569, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=112, Expect=4e-26]; ENSG00000237112, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=112, Expect=4e-26]} {Mouse: ENSMUSG00000024462, Gabbr1, gamma-aminobutyric acid (GABA) B receptor, 1, [Score=115, Expect=4e-27]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=100, Expect=3e-22]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [Score=115, Expect=6e-28]} {Smed: dd_Smed_v6_20665_0_1, dd_Smed_v6_20665_0_1, [Score=92.4, Expect=6e-20]} {RNA1509_44701} {RNA1310_17404.1, RNA1509_44701} {RNA1509_44701, RNA815_5685.1} |
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