M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_41777

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_41777 622 12.96 Mlig455_062288

Neo: -

Age: Down-Down-Up

 IQCB1 Mlig455_062288 {REF} {Length: 2148} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=29.9]} {Human: ENSG00000173226, IQCB1, IQ motif containing B1, [RH, Score=200, Expect=7e-56]} {Mouse: ENSMUSG00000022837, Iqcb1, IQ calmodulin-binding motif containing 1, [RH, Score=218, Expect=2e-62]} {Smed: dd_Smed_v6_11329_0_1, dd_Smed_v6_11329_0_1, [RH, Score=233, Expect=5e-68]} {RNA1509_8893} {RNA1310_11108.1} {RNA815_4095.1}

Cumulative graph for MligTC455_41777

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.45 4.03 0.40517 1.00000
RegionR2 0.472 4.03 0.34056 0.73268
RegionR3 0.058 4.03 0.88781 1.00000
RegionR4 0.458 4.03 0.38486 0.70969
RegionR5 -0.12 4.03 0.80008 1.00000
RegionR6 0.333 4.03 0.45000 1.00000
RegionR7 0.785 4.03 0.14194 0.70376
RegionR8 -0.537 4.03 0.54268 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.553 4.03 0.34445 1.00000
RegenerationR2 0.446 4.03 0.17397 0.61404
RegenerationR3 0.208 4.03 0.61629 0.91549
RegenerationR4 0.252 4.03 0.56377 0.89863
RegenerationR5 -0.047 4.03 0.90898 1.00000
RegenerationR6 -0.047 4.03 0.90780 1.00000
RegenerationBL 0.885 4.03 0.06021 0.28519
RegenerationTP 0.482 4.03 0.41307 0.83910


Genes with expression patterns similar to MligTC455_41777

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_41777 622 12.96 Mlig455_062288

Neo: -

Age: Down-Down-Up

 IQCB1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_062288 {REF} {Length: 2148} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=29.9]} {Human: ENSG00000173226, IQCB1, IQ motif containing B1, [RH, Score=200, Expect=7e-56]} {Mouse: ENSMUSG00000022837, Iqcb1, IQ calmodulin-binding motif containing 1, [RH, Score=218, Expect=2e-62]} {Smed: dd_Smed_v6_11329_0_1, dd_Smed_v6_11329_0_1, [RH, Score=233, Expect=5e-68]} {RNA1509_8893} {RNA1310_11108.1} {RNA815_4095.1}
2. MligTC455_41776 767 15.97 Mlig455_049379

Neo: -

Age: -

 IQCB1 3.344 - 0.768 - 0.954 0.852 0.770 Mlig455_049379 {REF} {Length: 2348} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=30.0]} {Human: ENSG00000173226, IQCB1, IQ motif containing B1, [RH, Score=202, Expect=2e-56]} {Mouse: ENSMUSG00000022837, Iqcb1, IQ calmodulin-binding motif containing 1, [RH, Score=220, Expect=3e-63]} {Smed: dd_Smed_v6_11329_0_1, dd_Smed_v6_11329_0_1, [RH, Score=233, Expect=4e-68]} {RNA1509_36269, RNA1509_8893} {RNA1310_11108.1, RNA1509_36269, RNA1509_8893} {RNA1509_36269, RNA1509_8893, RNA815_4095.1}
3. MligTC455_29768 804 16.74 Mlig455_037892, Mlig455_038927

Neo: -

Age: -

 MAP3K15, MAP3K19 2.624 - - 0.812 0.850 - 0.962

Mlig455_037892 {REF} {Length: 2619} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=175.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=128.7]; Ankyrin repeats (many copies) [PF13637.8, score=54.9]; Ankyrin repeats (3 copies) [PF12796.9, score=34.6]; Fungal protein kinase [PF17667.3, score=31.2]; Ankyrin repeats (many copies) [PF13857.8, score=29.4]; Kinase-like [PF14531.8, score=22.7]; Ankyrin repeat [PF13606.8, score=19.1]} {Human: ENSG00000180815, MAP3K15, mitogen-activated protein kinase kinase kinase 15, [Score=144, Expect=5e-36]; ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=142, Expect=2e-35]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=142, Expect=2e-36]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=127, Expect=5e-31]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=117, Expect=5e-28]} {Smed: dd_Smed_v6_9984_0_1, dd_Smed_v6_9984_0_1, [Score=127, Expect=4e-33]} {RNA1509_45037} {RNA1310_24096.1} {RNA815_5323.2}

Mlig455_038927 {REF} {Length: 6244} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=234.3]; Protein kinase domain [PF00069.27, score=182.0]; Ankyrin repeats (3 copies) [PF12796.9, score=167.4]; Ankyrin repeats (many copies) [PF13857.8, score=130.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=130.8]; Ankyrin repeat [PF13606.8, score=82.5]; Ankyrin repeat [PF00023.32, score=64.1]; CRISPR-associated protein [PF12469.10, score=34.9]; Uncharacterized protein conserved in bacteria (DUF2064) [PF09837.11, score=29.8]; ABC1 atypical kinase-like domain [PF03109.18, score=21.0]; Fungal protein kinase [PF17667.3, score=20.0]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=160, Expect=2e-39]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=158, Expect=1e-40]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=133, Expect=7e-32]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=126, Expect=8e-30]} {Smed: dd_Smed_v6_2030_0_9, dd_Smed_v6_2030_0_9, [Score=133, Expect=4e-33]} {RNA1509_45037} {RNA1310_17852.1, RNA1509_45037} {RNA1509_45037, RNA815_5323.2}
4. MligTC455_31001 1473 30.69 Mlig455_024877, Mlig455_068443

Neo: -

Age: -

Region-enriched R8: 2.076/0.01787

 MPEG1 2.44 - - 0.731 - 0.756 0.953

Mlig455_024877 {REF} {Length: 3371} {Pfam: MAC/Perforin domain [PF01823.21, score=139.0]} {Human: ENSG00000197629, MPEG1, macrophage expressed 1, [RH, Score=362, Expect=4e-108]} {Mouse: ENSMUSG00000046805, Mpeg1, macrophage expressed gene 1, [RH, Score=368, Expect=2e-110]} {Smed: dd_Smed_v6_983_0_1, dd_Smed_v6_983_0_1, [RH, Score=355, Expect=1e-106]} {RNA1509_21688, RNA1509_30083, RNA1509_44998, RNA1509_4699} {RNA1310_4591, RNA1509_21688, RNA1509_30083, RNA1509_44998} {RNA1509_21688, RNA1509_30083, RNA1509_44998, RNA815_1433.1}

Mlig455_068443 {REF} {Length: 5971} {Pfam: MAC/Perforin domain [PF01823.21, score=139.0]} {Human: ENSG00000197629, MPEG1, macrophage expressed 1, [RH, Score=362, Expect=4e-108]} {Mouse: ENSMUSG00000046805, Mpeg1, macrophage expressed gene 1, [RH, Score=368, Expect=2e-110]} {Smed: dd_Smed_v6_983_0_1, dd_Smed_v6_983_0_1, [RH, Score=355, Expect=1e-106]} {RNA1509_4699} {RNA1310_4591} {RNA815_1433.1}
5. MligTC455_20687 1436 29.92 Mlig455_002996

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.587

 TMEM145 2.418 - - 0.723 - 0.727 0.968 Mlig455_002996 {REF} {Length: 3881} {Pfam: Rhodopsin-like GPCR transmembrane domain [PF10192.11, score=160.9]} {Human: ENSG00000167619, TMEM145, transmembrane protein 145, [RH, Score=243, Expect=1e-72]} {Mouse: ENSMUSG00000043843, Tmem145, transmembrane protein 145, [RH, Score=279, Expect=1e-85]} {Dmel: FBgn0034674, CG9304, [Score=67.0, Expect=3e-11]} {Celegans: WBGene00007595, C15A7.2, [Score=202, Expect=2e-57]} {RNA1509_56975} {RNA1310_10889.1} {RNA815_2731}
6. MligTC455_47148 1161 24.18 Mlig455_054041

Neo: -

Age: logFC(26M/2M)=-0.290

 TTC24 1.89 - - - 0.980 - 0.910 Mlig455_054041 {REF} {Length: 2392} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=77.4]; Tetratricopeptide repeat [PF07719.19, score=61.9]; Tetratricopeptide repeat [PF13176.8, score=54.0]; Tetratricopeptide repeat [PF00515.30, score=52.7]; Tetratricopeptide repeat [PF13181.8, score=35.3]; MalT-like TPR region [PF17874.3, score=20.9]} {Human: ENSG00000187862, TTC24, tetratricopeptide repeat domain 24, [RH, Score=102, Expect=5e-22]} {Mouse: ENSMUSG00000051036, Ttc24, tetratricopeptide repeat domain 24, [RH, Score=66.6, Expect=2e-11]} {RNA1509_21506, RNA1509_39716, RNA1509_7768} {RNA1310_13043, RNA1509_21506, RNA1509_39716, RNA1509_7768} {RNA1509_21506, RNA1509_39716, RNA1509_7768, RNA815_789.1}
7. MligTC455_38593 2042 42.54 Mlig455_010843

Neo: -

Age: -

 1.726 - - - - 0.768 0.958 Mlig455_010843 {REF} {Length: 1508} {Pfam: Wnt and FGF inhibitory regulator [PF13908.8, score=19.2]} {RNA1509_23850, RNA1509_53025, RNA1509_55041, RNA1509_9732} {RNA1310_24247.1, RNA1509_23850, RNA1509_53025, RNA1509_55041, RNA1509_9732} {RNA1509_23850, RNA1509_53025, RNA1509_55041, RNA1509_9732, RNA815_10484}
8. MligTC455_35890 1563 32.56 Mlig455_047529, Mlig455_047538, Mlig455_059662

Neo: -

Age: -

 IFT80 1.707 - - - 0.963 - 0.744

Mlig455_047529 {REF} {Length: 2724} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=55.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=38.4]} {Human: ENSG00000068885, IFT80, intraflagellar transport 80, [RH, Score=871, Expect=0.0]} {Mouse: ENSMUSG00000027778, Ift80, intraflagellar transport 80, [RH, Score=868, Expect=0.0]} {Dmel: FBgn0032891, Oseg5, Outer segment 5, [RH, Score=447, Expect=7e-146]} {Celegans: WBGene00000484, che-2, CHE-2 protein, [RH, Score=581, Expect=0.0]} {Smed: dd_Smed_v6_9110_0_1, dd_Smed_v6_9110_0_1, [RH, Score=793, Expect=0.0]} {RNA1509_7485} {RNA1310_7061, RNA1509_7485} {RNA1509_7485, RNA815_2221}

Mlig455_047538 {REF} {Length: 2547} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=52.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=35.7]} {Human: ENSG00000068885, IFT80, intraflagellar transport 80, [Score=703, Expect=0.0]} {Mouse: ENSMUSG00000027778, Ift80, intraflagellar transport 80, [Score=703, Expect=0.0]} {Dmel: FBgn0032891, Oseg5, Outer segment 5, [Score=358, Expect=2e-113]} {Celegans: WBGene00000484, che-2, CHE-2 protein, [Score=451, Expect=3e-149]} {Smed: dd_Smed_v6_9110_0_1, dd_Smed_v6_9110_0_1, [Score=620, Expect=0.0]} {RNA1509_7485} {RNA1310_7061} {RNA815_2221}

Mlig455_059662 {REF} {Length: 2718} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=54.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=38.1]} {Human: ENSG00000068885, IFT80, intraflagellar transport 80, [RH, Score=871, Expect=0.0]} {Mouse: ENSMUSG00000027778, Ift80, intraflagellar transport 80, [RH, Score=869, Expect=0.0]} {Dmel: FBgn0032891, Oseg5, Outer segment 5, [RH, Score=448, Expect=2e-146]} {Celegans: WBGene00000484, che-2, CHE-2 protein, [RH, Score=581, Expect=0.0]} {Smed: dd_Smed_v6_9110_0_1, dd_Smed_v6_9110_0_1, [RH, Score=794, Expect=0.0]} {RNA1509_7485} {RNA1310_7061} {RNA815_2221}
9. MligTC455_13977 1496 31.16 Mlig455_039726

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.608

 CXorf65 1.679 - - - 0.715 - 0.964 Mlig455_039726 {REF} {Length: 962} {Pfam: Putative Interleukin 2 receptor, gamma chain [PF15874.7, score=76.8]} {Human: ENSG00000204165, CXorf65, chromosome X open reading frame 65, [RH, Score=52.0, Expect=3e-08]} {Mouse: ENSMUSG00000090141, Gm614, predicted gene 614, [RH, Score=53.9, Expect=4e-09]} {RNA1509_44868, RNA1509_8992} {RNA1310_45539.1, RNA1509_44868, RNA1509_8992} {RNA1509_44868, RNA1509_8992, RNA815_12228}
10. MligTC455_38601 233 4.86 Mlig455_028048, Mlig455_028113

Neo: -

Age: -

 CCDC87 1.679 - - - 0.951 - 0.728

Mlig455_028048 {REF} {Length: 3136} {Mouse: ENSMUSG00000067872, Ccdc87, coiled-coil domain containing 87, [Score=57.0, Expect=7e-08]} {Smed: dd_Smed_v6_12480_0_1, dd_Smed_v6_12480_0_1, [Score=145, Expect=6e-36]} {RNA1509_8830} {RNA1310_2448.2} {RNA815_4309}

Mlig455_028113 {REF} {Length: 4779} {Pfam: Microtubule associated protein (MAP65/ASE1 family) [PF03999.14, score=22.7]} {Human: ENSG00000182791, CCDC87, coiled-coil domain containing 87, [RH, Score=116, Expect=8e-26]} {Mouse: ENSMUSG00000067872, Ccdc87, coiled-coil domain containing 87, [RH, Score=112, Expect=1e-24]} {Smed: dd_Smed_v6_12480_0_1, dd_Smed_v6_12480_0_1, [RH, Score=326, Expect=6e-96]} {RNA1509_8830} {RNA1310_2448.2} {RNA815_4309}
11. MligTC455_20406 617 12.86 Mlig455_050127

Neo: -

Age: logFC(26M/2M)=-0.419

 BPNT1 0.969 - - - 0.969 - - Mlig455_050127 {REF} {Length: 1654} {Pfam: Inositol monophosphatase family [PF00459.27, score=130.3]} {Human: ENSG00000162813, BPNT1, 3'(2'), 5'-bisphosphate nucleotidase 1, [Score=179, Expect=9e-54]} {Mouse: ENSMUSG00000026617, Bpnt1, bisphosphate 3'-nucleotidase 1, [Score=184, Expect=3e-56]} {Dmel: FBgn0039698, CG7789, [Score=174, Expect=1e-52]} {Celegans: WBGene00044063, bpnt-1, 3'(2'), 5'-BisPhosphate NucleoTidase 1 homolog, [Score=162, Expect=7e-48]} {Smed: dd_Smed_v6_1334_0_1, dd_Smed_v6_1334_0_1, [Score=177, Expect=7e-54]} {RNA1509_24263, RNA1509_53841} {RNA1310_30268.1, RNA1509_53841} {RNA1509_53841, RNA815_24429}
12. MligTC455_27691 41817 871.19 Mlig455_048291, Mlig455_048316

Neo: -

Age: -

 TUBA1A 0.963 - - - 0.963 - -

Mlig455_048291 {REF} {Length: 2408} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=229.4]; Tubulin C-terminal domain [PF03953.19, score=175.8]; Tubulin domain [PF14881.8, score=19.0]} {Human: ENSG00000167552, TUBA1A, tubulin alpha 1a, [RH, Score=933, Expect=0.0]; ENSG00000123416, TUBA1B, tubulin alpha 1b, [RH, Score=931, Expect=0.0]; ENSG00000198033, TUBA3C, tubulin alpha 3c, [RH, Score=924, Expect=0.0]; ENSG00000075886, TUBA3D, tubulin alpha 3d, [RH, Score=924, Expect=0.0]; ENSG00000152086, TUBA3E, tubulin alpha 3e, [RH, Score=907, Expect=0.0]; ENSG00000167553, TUBA1C, tubulin alpha 1c, [RH, Score=887, Expect=0.0]} {Mouse: ENSMUSG00000072235, Tuba1a, tubulin, alpha 1A, [RH, Score=933, Expect=0.0]; ENSMUSG00000023004, Tuba1b, tubulin, alpha 1B, [RH, Score=931, Expect=0.0]; ENSMUSG00000067702, Tuba3a, tubulin, alpha 3A, [RH, Score=924, Expect=0.0]; ENSMUSG00000067338, Tuba3b, tubulin, alpha 3B, [RH, Score=924, Expect=0.0]} {Dmel: FBgn0003884, alphaTub84B, alpha-Tubulin at 84B, [RH, Score=919, Expect=0.0]} {Celegans: WBGene00003175, mec-12, Tubulin alpha-3 chain Detyrosinated tubulin alpha-3 chain, [RH, Score=853, Expect=0.0]} {Smed: dd_Smed_v6_10947_0_2, dd_Smed_v6_10947_0_2, [RH, Score=931, Expect=0.0]} {RNA1509_1977, RNA1509_2612, RNA1509_34417, RNA1509_4284, RNA1509_48701} {RNA1310_10339.1, RNA1509_1977, RNA1509_2612, RNA1509_4284, RNA1509_48701} {RNA1509_1977, RNA1509_2612, RNA1509_4284, RNA1509_48701, RNA815_3971.1}

Mlig455_048316 {REF} {Length: 2382} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=229.4]; Tubulin C-terminal domain [PF03953.19, score=175.8]; Tubulin domain [PF14881.8, score=19.0]} {Human: ENSG00000167552, TUBA1A, tubulin alpha 1a, [RH, Score=933, Expect=0.0]; ENSG00000123416, TUBA1B, tubulin alpha 1b, [RH, Score=931, Expect=0.0]; ENSG00000198033, TUBA3C, tubulin alpha 3c, [RH, Score=924, Expect=0.0]; ENSG00000075886, TUBA3D, tubulin alpha 3d, [RH, Score=924, Expect=0.0]; ENSG00000152086, TUBA3E, tubulin alpha 3e, [RH, Score=907, Expect=0.0]; ENSG00000167553, TUBA1C, tubulin alpha 1c, [RH, Score=887, Expect=0.0]} {Mouse: ENSMUSG00000072235, Tuba1a, tubulin, alpha 1A, [RH, Score=933, Expect=0.0]; ENSMUSG00000023004, Tuba1b, tubulin, alpha 1B, [RH, Score=931, Expect=0.0]; ENSMUSG00000067702, Tuba3a, tubulin, alpha 3A, [RH, Score=924, Expect=0.0]; ENSMUSG00000067338, Tuba3b, tubulin, alpha 3B, [RH, Score=924, Expect=0.0]} {Dmel: FBgn0003884, alphaTub84B, alpha-Tubulin at 84B, [RH, Score=919, Expect=0.0]} {Celegans: WBGene00003175, mec-12, Tubulin alpha-3 chain Detyrosinated tubulin alpha-3 chain, [RH, Score=853, Expect=0.0]} {Smed: dd_Smed_v6_10947_0_2, dd_Smed_v6_10947_0_2, [RH, Score=931, Expect=0.0]} {RNA1509_11920, RNA1509_14713, RNA1509_34417, RNA1509_43963, RNA1509_9693} {RNA1310_10339.1, RNA1509_11920, RNA1509_14713, RNA1509_43963, RNA1509_9693} {RNA1509_11920, RNA1509_14713, RNA1509_43963, RNA1509_9693, RNA815_3971.1}
13. MligTC455_27690 20888 435.17 Mlig455_048257

Neo: -

Age: Up-Down-Up

 TUBA1A 0.962 - - - 0.962 - - Mlig455_048257 {REF} {Length: 2408} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=229.4]; Tubulin C-terminal domain [PF03953.19, score=175.8]; Tubulin domain [PF14881.8, score=19.0]} {Human: ENSG00000167552, TUBA1A, tubulin alpha 1a, [RH, Score=933, Expect=0.0]; ENSG00000123416, TUBA1B, tubulin alpha 1b, [RH, Score=931, Expect=0.0]; ENSG00000198033, TUBA3C, tubulin alpha 3c, [RH, Score=924, Expect=0.0]; ENSG00000075886, TUBA3D, tubulin alpha 3d, [RH, Score=924, Expect=0.0]; ENSG00000152086, TUBA3E, tubulin alpha 3e, [RH, Score=907, Expect=0.0]; ENSG00000167553, TUBA1C, tubulin alpha 1c, [RH, Score=887, Expect=0.0]} {Mouse: ENSMUSG00000072235, Tuba1a, tubulin, alpha 1A, [RH, Score=933, Expect=0.0]; ENSMUSG00000023004, Tuba1b, tubulin, alpha 1B, [RH, Score=931, Expect=0.0]; ENSMUSG00000067702, Tuba3a, tubulin, alpha 3A, [RH, Score=924, Expect=0.0]; ENSMUSG00000067338, Tuba3b, tubulin, alpha 3B, [RH, Score=924, Expect=0.0]} {Dmel: FBgn0003884, alphaTub84B, alpha-Tubulin at 84B, [RH, Score=919, Expect=0.0]} {Celegans: WBGene00003175, mec-12, Tubulin alpha-3 chain Detyrosinated tubulin alpha-3 chain, [RH, Score=853, Expect=0.0]} {Smed: dd_Smed_v6_10947_0_2, dd_Smed_v6_10947_0_2, [RH, Score=931, Expect=0.0]} {RNA1509_34417, RNA1509_43271} {RNA1310_10339.1, RNA1509_34417, RNA1509_43271} {RNA1509_34417, RNA1509_43271, RNA815_3971.1}
14. MligTC455_41923 600 12.51 Mlig455_027328

Neo: -

Age: Down-Up-Down

Region-enriched R2: 2.033/0.02987

 0.955 - - - - - 0.955 Mlig455_027328 {REF} {Length: 1845} {RNA1509_32344} {RNA1310_19859, RNA1509_32344} {RNA1509_32344, RNA815_8532}
15. MligTC455_50510 9657 201.19 Mlig455_010517, Mlig455_061819, Mlig455_061855, Mlig455_061863

Neo: -

Age: Down-Up-Down

Regeneration-downregulated BL: -1.759

Regeneration-depleted BL: -1.759

 PPP1R3B 0.951 - - - - - 0.951

Mlig455_010517 {REF} {Length: 1875} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=63.8]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=27.0]} {Human: ENSG00000173281, PPP1R3B, protein phosphatase 1 regulatory subunit 3B, [Score=57.4, Expect=6e-09]; ENSG00000285343, PPP1R3B, protein phosphatase 1 regulatory subunit 3B, [Score=57.4, Expect=6e-09]} {Mouse: ENSMUSG00000072494, Ppp1r3e, protein phosphatase 1, regulatory subunit 3E, [Score=64.7, Expect=1e-11]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=72.8, Expect=2e-14]} {Smed: dd_Smed_v6_1526_0_1, dd_Smed_v6_1526_0_1, [Score=58.9, Expect=6e-10]} {RNA1509_2365} {RNA1310_15793} {RNA815_6339.1}

Mlig455_061819 {REF} {Length: 1875} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=64.0]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=27.0]} {Human: ENSG00000173281, PPP1R3B, protein phosphatase 1 regulatory subunit 3B, [Score=55.5, Expect=2e-08]; ENSG00000285343, PPP1R3B, protein phosphatase 1 regulatory subunit 3B, [Score=55.5, Expect=2e-08]} {Mouse: ENSMUSG00000072494, Ppp1r3e, protein phosphatase 1, regulatory subunit 3E, [Score=64.3, Expect=1e-11]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=70.1, Expect=1e-13]} {Smed: dd_Smed_v6_1526_0_1, dd_Smed_v6_1526_0_1, [Score=57.8, Expect=1e-09]} {RNA1509_20831, RNA1509_21113, RNA1509_2365, RNA1509_51404} {RNA1310_15793, RNA1509_20831, RNA1509_21113, RNA1509_2365, RNA1509_51404} {RNA1509_20831, RNA1509_21113, RNA1509_2365, RNA1509_51404, RNA815_6339.1}

Mlig455_061855 {REF} {Length: 1862} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=64.0]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=27.0]} {Human: ENSG00000173281, PPP1R3B, protein phosphatase 1 regulatory subunit 3B, [Score=55.5, Expect=2e-08]; ENSG00000285343, PPP1R3B, protein phosphatase 1 regulatory subunit 3B, [Score=55.5, Expect=2e-08]} {Mouse: ENSMUSG00000072494, Ppp1r3e, protein phosphatase 1, regulatory subunit 3E, [Score=64.3, Expect=1e-11]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=70.1, Expect=1e-13]} {Smed: dd_Smed_v6_1526_0_1, dd_Smed_v6_1526_0_1, [Score=57.8, Expect=1e-09]} {RNA1509_2365, RNA1509_39538, RNA1509_59849} {RNA1310_15793, RNA1509_39538, RNA1509_59849} {RNA1509_39538, RNA1509_59849, RNA815_6339.1}

Mlig455_061863 {REF} {Length: 1748} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=58.7]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=27.1]} {Human: ENSG00000285343, PPP1R3B, protein phosphatase 1 regulatory subunit 3B, [Score=51.6, Expect=4e-07]; ENSG00000173281, PPP1R3B, protein phosphatase 1 regulatory subunit 3B, [Score=51.6, Expect=4e-07]} {Mouse: ENSMUSG00000072494, Ppp1r3e, protein phosphatase 1, regulatory subunit 3E, [Score=64.7, Expect=9e-12]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=60.8, Expect=1e-10]} {Smed: dd_Smed_v6_1526_0_1, dd_Smed_v6_1526_0_1, [Score=54.3, Expect=1e-08]} {RNA1509_2365} {RNA1310_15793} {RNA815_6339.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA