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Results for MligTC455_41780

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_41780 234 4.88 Mlig455_060109

Neo: Int S/G2/M

Age: Down-Down-Up

 DKC1 Mlig455_060109 {REF} {Length: 1982} {TRANSSPLICED} {Pfam: DKCLD (NUC011) domain [PF08068.14, score=110.0]; TruB family pseudouridylate synthase (N terminal domain) [PF01509.20, score=74.7]; tRNA pseudouridylate synthase B C-terminal domain [PF16198.7, score=70.9]; PUA domain [PF01472.22, score=70.5]} {Human: ENSG00000130826, DKC1, dyskerin pseudouridine synthase 1, [RH, Score=590, Expect=0.0]} {Mouse: ENSMUSG00000031403, Dkc1, dyskeratosis congenita 1, dyskerin, [RH, Score=590, Expect=0.0]} {Dmel: FBgn0259937, Nop60B, Nucleolar protein at 60B, [RH, Score=620, Expect=0.0]} {Celegans: WBGene00010478, K01G5.5, Putative H/ACA ribonucleoprotein complex subunit 4, [RH, Score=562, Expect=0.0]} {Smed: dd_Smed_v6_4087_0_1, dd_Smed_v6_4087_0_1, [RH, Score=486, Expect=2e-170]} {RNA1509_2479, RNA1509_53946, RNA1509_58204, RNA1509_9463} {RNA1310_14344.1, RNA1509_2479, RNA1509_53946, RNA1509_58204, RNA1509_9463} {RNA1509_2479, RNA1509_53946, RNA1509_58204, RNA1509_9463, RNA815_5205}

Cumulative graph for MligTC455_41780

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.14 2.885 0.45259 1.00000
RegionR2 -1.02 2.885 0.21872 0.58683
RegionR3 -0.357 2.885 0.63915 1.00000
RegionR4 1.583 2.885 0.01612 0.08713
RegionR5 1.297 2.885 0.01978 0.09637
RegionR6 0.203 2.885 0.75601 1.00000
RegionR7 -2.584 2.885 0.06917 0.50565
RegionR8 -0.261 2.885 0.86629 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.757 2.885 0.13612 0.87134
RegenerationR2 -0.153 2.885 0.79129 0.98699
RegenerationR3 1.486 2.885 0.01504 0.22400
RegenerationR4 0.663 2.885 0.23057 0.67963
RegenerationR5 0.407 2.885 0.40572 0.80289
RegenerationR6 1.231 2.885 0.03957 0.24858
RegenerationBL 0.864 2.885 0.37130 0.73948
RegenerationTP -0.374 2.885 0.83909 1.00000


Genes with expression patterns similar to MligTC455_41780

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_41780 234 4.88 Mlig455_060109

Neo: Int S/G2/M

Age: Down-Down-Up

 DKC1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_060109 {REF} {Length: 1982} {TRANSSPLICED} {Pfam: DKCLD (NUC011) domain [PF08068.14, score=110.0]; TruB family pseudouridylate synthase (N terminal domain) [PF01509.20, score=74.7]; tRNA pseudouridylate synthase B C-terminal domain [PF16198.7, score=70.9]; PUA domain [PF01472.22, score=70.5]} {Human: ENSG00000130826, DKC1, dyskerin pseudouridine synthase 1, [RH, Score=590, Expect=0.0]} {Mouse: ENSMUSG00000031403, Dkc1, dyskeratosis congenita 1, dyskerin, [RH, Score=590, Expect=0.0]} {Dmel: FBgn0259937, Nop60B, Nucleolar protein at 60B, [RH, Score=620, Expect=0.0]} {Celegans: WBGene00010478, K01G5.5, Putative H/ACA ribonucleoprotein complex subunit 4, [RH, Score=562, Expect=0.0]} {Smed: dd_Smed_v6_4087_0_1, dd_Smed_v6_4087_0_1, [RH, Score=486, Expect=2e-170]} {RNA1509_2479, RNA1509_53946, RNA1509_58204, RNA1509_9463} {RNA1310_14344.1, RNA1509_2479, RNA1509_53946, RNA1509_58204, RNA1509_9463} {RNA1509_2479, RNA1509_53946, RNA1509_58204, RNA1509_9463, RNA815_5205}
2. MligTC455_45234 2330 48.54 Mlig455_020564, Mlig455_020615

Neo: -

Age: -

 GSTT1 2.603 - - - 0.914 0.962 0.727

Mlig455_020564 {REF} {Length: 1352} {Pfam: Glutathione S-transferase, N-terminal domain [PF02798.22, score=40.6]; Glutathione S-transferase, N-terminal domain [PF13417.8, score=29.7]; Glutathione S-transferase, N-terminal domain [PF13409.8, score=29.0]; Glutathione S-transferase, C-terminal domain [PF00043.27, score=26.9]; Glutathione S-transferase, C-terminal domain [PF14497.8, score=26.8]; Glutathione S-transferase, C-terminal domain [PF13410.8, score=24.7]} {Human: ENSG00000277656, GSTT1, glutathione S-transferase theta 1, [RH, Score=176, Expect=9e-55]} {Mouse: ENSMUSG00000001665, Gstt3, glutathione S-transferase, theta 3, [RH, Score=179, Expect=8e-56]; ENSMUSG00000001663, Gstt1, glutathione S-transferase, theta 1, [RH, Score=173, Expect=1e-53]} {Dmel: FBgn0031117, GstT3, Glutathione S transferase T3, [RH, Score=168, Expect=8e-52]} {Smed: dd_Smed_v6_5451_0_1, dd_Smed_v6_5451_0_1, [RH, Score=166, Expect=3e-51]} {RNA1509_7848} {RNA1310_26118} {RNA815_12339}

Mlig455_020615 {REF} {Length: 1412} {Pfam: Glutathione S-transferase, N-terminal domain [PF02798.22, score=42.9]; Glutathione S-transferase, N-terminal domain [PF13417.8, score=32.5]; Glutathione S-transferase, N-terminal domain [PF13409.8, score=30.1]; Glutathione S-transferase, C-terminal domain [PF00043.27, score=26.9]; Glutathione S-transferase, C-terminal domain [PF14497.8, score=26.9]; Glutathione S-transferase, C-terminal domain [PF13410.8, score=24.7]} {Human: ENSG00000277656, GSTT1, glutathione S-transferase theta 1, [RH, Score=176, Expect=2e-54]} {Mouse: ENSMUSG00000001665, Gstt3, glutathione S-transferase, theta 3, [RH, Score=179, Expect=1e-55]; ENSMUSG00000001663, Gstt1, glutathione S-transferase, theta 1, [RH, Score=176, Expect=2e-54]} {Dmel: FBgn0031117, GstT3, Glutathione S transferase T3, [RH, Score=171, Expect=8e-53]} {Celegans: WBGene00001787, gst-39, Glutathione S-Transferase, [Score=46.2, Expect=5e-06]} {Smed: dd_Smed_v6_5451_0_1, dd_Smed_v6_5451_0_1, [RH, Score=166, Expect=4e-51]} {RNA1509_7848} {RNA1310_26118, RNA1509_7848} {RNA1509_7848, RNA815_12339}
3. MligTC455_21748 1136 23.66 Mlig455_016190

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.022/0.00025

 1.801 - - - 0.833 0.968 - Mlig455_016190 {REF} {Length: 2131} {TRANSSPLICED} {Smed: dd_Smed_v6_8469_0_1, dd_Smed_v6_8469_0_1, [RH, Score=67.4, Expect=1e-11]} {RNA1509_11127, RNA1509_19303} {RNA1310_11899, RNA1509_11127, RNA1509_19303} {RNA1509_11127, RNA1509_19303, RNA815_4343}
4. MligTC455_27958 907 18.9 Mlig455_027301

Neo: -

Age: Down-Up-Up

Region-enriched R6: 1.674/0.00384
Region-enriched R3: 1.657/0.00121
Region-enriched R5: 1.024/0.04954

 SLC6A1 1.786 - - - 0.821 0.965 - Mlig455_027301 {REF} {Length: 2723} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=127.1]} {Human: ENSG00000157103, SLC6A1, solute carrier family 6 member 1, [Score=106, Expect=2e-23]} {Mouse: ENSMUSG00000030310, Slc6a1, solute carrier family 6 (neurotransmitter transporter, GABA), member 1, [Score=103, Expect=8e-23]} {Dmel: FBgn0011603, ine, inebriated, [Score=112, Expect=2e-25]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=81.6, Expect=5e-16]} {Smed: dd_Smed_v6_7447_0_1, dd_Smed_v6_7447_0_1, [RH, Score=424, Expect=3e-142]} {RNA1509_1953} {RNA1310_10042.1} {RNA815_3754.1}
5. MligTC455_51939 398 8.29 Mlig455_021929

Neo: -

Age: Down-Up-Down

Region-enriched R5: 1.711/0.02614

 TOX4 0.959 - - - - 0.959 - Mlig455_021929 {REF} {Length: 2227} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=31.2]; HMG-box domain [PF09011.12, score=30.8]; Coiled-coil domain-containing protein 124 /Oxs1 [PF06244.14, score=19.9]} {Human: ENSG00000092203, TOX4, TOX high mobility group box family member 4, [Score=53.1, Expect=7e-07]; ENSG00000124191, TOX2, TOX high mobility group box family member 2, [Score=52.8, Expect=9e-07]; ENSG00000103460, TOX3, TOX high mobility group box family member 3, [Score=52.4, Expect=1e-06]; ENSG00000198846, TOX, thymocyte selection associated high mobility group box, [Score=50.8, Expect=4e-06]} {Mouse: ENSMUSG00000043668, Tox3, TOX high mobility group box family member 3, [RH, Score=52.4, Expect=9e-07]} {Dmel: FBgn0035238, CG12104, [RH, Score=70.1, Expect=3e-13]} {Smed: dd_Smed_v6_22626_0_1, dd_Smed_v6_22626_0_1, [Score=46.2, Expect=5e-06]} {RNA1509_13216, RNA1509_21366, RNA1509_50240} {RNA1310_11409.1, RNA1509_21366, RNA1509_50240} {RNA1509_21366, RNA1509_50240, RNA815_3695.1}
6. MligTC455_22531 642 13.38 Mlig455_003820, Mlig455_019969, Mlig455_033265, Mlig455_048427, Mlig455_048495, Mlig455_048570, Mlig455_049044

Neo: -

Age: -

 RAD54L 0.957 - - - - 0.957 -

Mlig455_003820 {REF} {Length: 560} {Pfam: DDE superfamily endonuclease [PF13358.8, score=40.0]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=79.7, Expect=7e-20]} {RNA1509_20978} {RNA1310_8640} {RNA815_3193.1}

Mlig455_019969 {REF} {Length: 1046} {Pfam: Homeodomain-like domain [PF13384.8, score=50.0]; DDE superfamily endonuclease [PF13358.8, score=39.2]; Helix-turn-helix domain [PF13518.8, score=38.4]; Winged helix-turn helix [PF13551.8, score=34.3]; Homeodomain-like domain [PF13565.8, score=30.0]; Transposase [PF01498.20, score=28.3]; Winged helix-turn-helix DNA-binding [PF13412.8, score=24.9]; Helix-turn-helix [PF01381.24, score=20.4]; Helix-turn-helix domain of resolvase [PF02796.17, score=20.0]; CENP-B N-terminal DNA-binding domain [PF04218.15, score=18.1]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.4, Expect=9e-20]} {RNA1509_20978} {RNA1310_12978} {RNA815_3193.1}

Mlig455_033265 {REF} {Length: 560} {Pfam: DDE superfamily endonuclease [PF13358.8, score=39.9]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.4, Expect=5e-21]} {RNA1509_20978} {RNA1310_8640} {RNA815_3193.1}

Mlig455_048427 {REF} {Length: 872} {Pfam: DDE superfamily endonuclease [PF13358.8, score=39.6]; Homeodomain-like domain [PF13384.8, score=21.9]; Transposase [PF01498.20, score=21.2]; Helix-turn-helix [PF01381.24, score=20.9]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.4, Expect=5e-20]} {RNA1509_20978} {RNA1310_12978} {RNA815_3193.1}

Mlig455_048495 {REF} {Length: 3787} {Pfam: SNF2-related domain [PF00176.25, score=206.4]; Helicase conserved C-terminal domain [PF00271.33, score=52.6]; Homeodomain-like domain [PF13384.8, score=44.4]; Helix-turn-helix domain [PF13518.8, score=38.4]; DDE superfamily endonuclease [PF13358.8, score=36.4]; Winged helix-turn helix [PF13551.8, score=31.5]; Type III restriction enzyme, res subunit [PF04851.17, score=29.5]; Rad54 N terminal [PF08658.12, score=27.1]; Homeodomain-like domain [PF13565.8, score=25.8]; Helix-turn-helix [PF01381.24, score=23.9]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=22.0]; Transposase [PF01498.20, score=20.2]} {Human: ENSG00000085999, RAD54L, RAD54 like, [RH, Score=930, Expect=0.0]} {Mouse: ENSMUSG00000028702, Rad54l, RAD54 like (S. cerevisiae), [RH, Score=931, Expect=0.0]} {Dmel: FBgn0002989, okr, okra, [RH, Score=795, Expect=0.0]} {Celegans: WBGene00004298, rad-54, [RH, Score=804, Expect=0.0]} {Smed: dd_Smed_v6_15532_0_1, dd_Smed_v6_15532_0_1, [RH, Score=947, Expect=0.0]} {RNA1509_38919} {RNA1310_7218} {RNA815_1852.1}

Mlig455_048570 {REF} {Length: 872} {Pfam: DDE superfamily endonuclease [PF13358.8, score=39.6]; Homeodomain-like domain [PF13384.8, score=21.9]; Transposase [PF01498.20, score=21.2]; Helix-turn-helix [PF01381.24, score=20.9]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.4, Expect=5e-20]} {RNA1509_20978} {RNA1310_12978} {RNA815_3193.1}

Mlig455_049044 {REF} {Length: 965} {Pfam: DDE superfamily endonuclease [PF13358.8, score=37.0]; Homeodomain-like domain [PF13384.8, score=21.1]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.8, Expect=6e-20]} {RNA1509_20978} {RNA1310_12978} {RNA815_3193.1}
7. MligTC455_44693 1615 33.65 Mlig455_051787

Neo: Neoblast, stringent

Age: -

 SUPT16H 0.957 - - - - 0.957 - Mlig455_051787 {REF} {Length: 4790} {Pfam: FACT complex subunit (SPT16/CDC68) [PF08644.13, score=153.7]; FACT complex subunit SPT16 N-terminal lobe domain [PF14826.8, score=137.2]; Metallopeptidase family M24 [PF00557.26, score=90.9]; Histone chaperone Rttp106-like [PF08512.14, score=62.0]} {Human: ENSG00000092201, SUPT16H, SPT16 homolog, facilitates chromatin remodeling subunit, [RH, Score=931, Expect=0.0]} {Mouse: ENSMUSG00000035726, Supt16, suppressor of Ty 16, [RH, Score=929, Expect=0.0]} {Dmel: FBgn0002183, dre4, [RH, Score=930, Expect=0.0]} {Celegans: WBGene00018849, spt-16, FACT complex subunit spt-16, [RH, Score=830, Expect=0.0]} {Smed: dd_Smed_v6_2595_0_1, dd_Smed_v6_2595_0_1, [RH, Score=741, Expect=0.0]} {RNA1509_1574} {RNA1310_2977.1} {RNA815_862}
8. MligTC455_47053 432 9 Mlig455_011168

Neo: -

Age: -

 MPDZ 0.954 - - - 0.954 - - Mlig455_011168 {REF} {Length: 5788} {Pfam: PDZ domain [PF00595.26, score=359.7]; PDZ domain [PF17820.3, score=163.4]; PDZ domain [PF13180.8, score=120.8]; Tricorn protease PDZ domain [PF14685.8, score=25.2]} {Human: ENSG00000107186, MPDZ, multiple PDZ domain crumbs cell polarity complex component, [Score=390, Expect=5e-111]} {Mouse: ENSMUSG00000061859, Patj, PATJ, crumbs cell polarity complex component, [Score=233, Expect=1e-61]} {Dmel: FBgn0067864, Patj, [Score=248, Expect=3e-68]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [Score=203, Expect=3e-52]} {Smed: dd_Smed_v6_5376_0_4, dd_Smed_v6_5376_0_4, [Score=357, Expect=2e-101]} {RNA1509_20643, RNA1509_23096, RNA1509_2906} {RNA1310_5491.2, RNA1509_20643, RNA1509_23096, RNA1509_2906} {RNA1509_20643, RNA1509_23096, RNA1509_2906, RNA815_1024}
9. MligTC455_29209 507 10.56 Mlig455_014725

Neo: -

Age: -

 APBA1 0.952 - - - - 0.952 - Mlig455_014725 {REF} {Length: 7049} {TRANSSPLICED} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=140.1]; PDZ domain [PF00595.26, score=89.2]; PDZ domain [PF17820.3, score=55.3]} {Human: ENSG00000107282, APBA1, amyloid beta precursor protein binding family A member 1, [RH, Score=496, Expect=4e-162]; ENSG00000276495, APBA2, amyloid beta precursor protein binding family A member 2, [RH, Score=494, Expect=1e-162]; ENSG00000034053, APBA2, amyloid beta precursor protein binding family A member 2, [RH, Score=494, Expect=1e-162]; ENSG00000276497, APBA1, amyloid beta precursor protein binding family A member 1, [RH, Score=491, Expect=2e-165]} {Mouse: ENSMUSG00000024897, Apba1, amyloid beta (A4) precursor protein binding, family A, member 1, [RH, Score=496, Expect=6e-162]; ENSMUSG00000030519, Apba2, amyloid beta (A4) precursor protein-binding, family A, member 2, [RH, Score=492, Expect=7e-162]} {Dmel: FBgn0052677, X11Lbeta, [RH, Score=572, Expect=9e-180]} {Celegans: WBGene00002999, lin-10, [RH, Score=552, Expect=0.0]} {Smed: dd_Smed_v6_2836_0_2, dd_Smed_v6_2836_0_2, [RH, Score=631, Expect=0.0]} {RNA1509_48945} {RNA1310_6524} {RNA815_2382}
10. MligTC455_25032 928 19.34 Mlig455_061298, Mlig455_061299, Mlig455_062656

Neo: Irradiation

Age: -

Region-enriched R5: 1.890/0.00071

 RFC3 0.951 - - - 0.951 - -

Mlig455_061298 {REF} {Length: 1322} {TRANSSPLICED} {Pfam: DNA polymerase III, delta subunit [PF13177.8, score=42.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=36.2]; Rad17 P-loop domain [PF03215.17, score=27.0]; DNA polymerase III, delta subunit [PF06144.15, score=25.4]; AAA ATPase domain [PF13191.8, score=25.0]; AAA domain (dynein-related subfamily) [PF07728.16, score=19.6]} {Human: ENSG00000133119, RFC3, replication factor C subunit 3, [RH, Score=493, Expect=1e-175]} {Mouse: ENSMUSG00000033970, Rfc3, replication factor C (activator 1) 3, [RH, Score=497, Expect=1e-177]} {Dmel: FBgn0028700, RfC38, Replication factor C 38kD subunit, [RH, Score=480, Expect=6e-171]} {Celegans: WBGene00004339, rfc-3, RFC (DNA replication factor) family, [RH, Score=368, Expect=7e-127]} {Smed: dd_Smed_v6_9695_0_1, dd_Smed_v6_9695_0_1, [RH, Score=444, Expect=3e-157]} {RNA1509_12650} {RNA1310_19461.1} {RNA815_9346}

Mlig455_061299 {REF} {Length: 923} {RNA1509_12650} {RNA1310_19461.1} {RNA815_61018}

Mlig455_062656 {REF} {Length: 2879} {TRANSSPLICED} {Pfam: DNA polymerase III, delta subunit [PF13177.8, score=42.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=36.2]; Rad17 P-loop domain [PF03215.17, score=27.0]; AAA ATPase domain [PF13191.8, score=26.1]; DNA polymerase III, delta subunit [PF06144.15, score=25.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=19.6]} {Human: ENSG00000133119, RFC3, replication factor C subunit 3, [RH, Score=493, Expect=7e-176]} {Mouse: ENSMUSG00000033970, Rfc3, replication factor C (activator 1) 3, [RH, Score=499, Expect=4e-178]} {Dmel: FBgn0028700, RfC38, Replication factor C 38kD subunit, [RH, Score=481, Expect=3e-171]} {Celegans: WBGene00004339, rfc-3, RFC (DNA replication factor) family, [RH, Score=368, Expect=5e-127]} {Smed: dd_Smed_v6_9695_0_1, dd_Smed_v6_9695_0_1, [RH, Score=447, Expect=4e-158]} {RNA1509_12650} {RNA1310_19461.1, RNA1509_12650} {RNA1509_12650, RNA815_9346}

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