TomoSeq data search

Data search

Results for MligTC455_41841

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_41841	29	0.60	Mlig455_013806, Mlig455_070876	Neo: - Age: Up-Down-Down	KCNT1	Mlig455_013806 {REF} {Length: 6128} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=92.6]; Ion channel [PF07885.18, score=43.5]; TrkA-N domain [PF02254.20, score=24.8]} {Human: ENSG00000107147, KCNT1, potassium sodium-activated channel subfamily T member 1, [Score=1117, Expect=0.0]} {Mouse: ENSMUSG00000058740, Kcnt1, potassium channel, subfamily T, member 1, [Score=1100, Expect=0.0]} {Dmel: FBgn0261698, SLO2, slowpoke 2, [RH, Score=811, Expect=0.0]} {Celegans: WBGene00004831, slo-2, SLO-2 potassium channel; SLOwpoke potassium channel family, [Score=867, Expect=0.0]} {Smed: dd_Smed_v6_9739_0_1, dd_Smed_v6_9739_0_1, [RH, Score=1373, Expect=0.0]} {RNA1509_17871} {RNA1310_3397} {RNA815_1330} Mlig455_070876 {REF} {Length: 1195} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=94.6]; Ion channel [PF07885.18, score=45.8]; Ion transport protein [PF00520.33, score=18.7]} {Human: ENSG00000107147, KCNT1, potassium sodium-activated channel subfamily T member 1, [Score=513, Expect=4e-172]; ENSG00000162687, KCNT2, potassium sodium-activated channel subfamily T member 2, [Score=511, Expect=3e-172]} {Mouse: ENSMUSG00000052726, Kcnt2, potassium channel, subfamily T, member 2, [Score=509, Expect=9e-172]; ENSMUSG00000058740, Kcnt1, potassium channel, subfamily T, member 1, [Score=502, Expect=9e-168]} {Dmel: FBgn0261698, SLO2, slowpoke 2, [Score=597, Expect=0.0]} {Celegans: WBGene00004831, slo-2, SLO-2 potassium channel; SLOwpoke potassium channel family, [Score=427, Expect=2e-140]} {Smed: dd_Smed_v6_9739_0_1, dd_Smed_v6_9739_0_1, [Score=645, Expect=0.0]} {RNA1509_17871} {RNA1310_3397} {RNA815_1330}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41841

0.60

Mlig455_013806, Mlig455_070876

Neo: -

Age: Up-Down-Down

KCNT1

Mlig455_013806 {REF} {Length: 6128} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=92.6]; Ion channel [PF07885.18, score=43.5]; TrkA-N domain [PF02254.20, score=24.8]} {Human: ENSG00000107147, KCNT1, potassium sodium-activated channel subfamily T member 1, [Score=1117, Expect=0.0]} {Mouse: ENSMUSG00000058740, Kcnt1, potassium channel, subfamily T, member 1, [Score=1100, Expect=0.0]} {Dmel: FBgn0261698, SLO2, slowpoke 2, [RH, Score=811, Expect=0.0]} {Celegans: WBGene00004831, slo-2, SLO-2 potassium channel; SLOwpoke potassium channel family, [Score=867, Expect=0.0]} {Smed: dd_Smed_v6_9739_0_1, dd_Smed_v6_9739_0_1, [RH, Score=1373, Expect=0.0]} {RNA1509_17871} {RNA1310_3397} {RNA815_1330}

Mlig455_070876 {REF} {Length: 1195} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=94.6]; Ion channel [PF07885.18, score=45.8]; Ion transport protein [PF00520.33, score=18.7]} {Human: ENSG00000107147, KCNT1, potassium sodium-activated channel subfamily T member 1, [Score=513, Expect=4e-172]; ENSG00000162687, KCNT2, potassium sodium-activated channel subfamily T member 2, [Score=511, Expect=3e-172]} {Mouse: ENSMUSG00000052726, Kcnt2, potassium channel, subfamily T, member 2, [Score=509, Expect=9e-172]; ENSMUSG00000058740, Kcnt1, potassium channel, subfamily T, member 1, [Score=502, Expect=9e-168]} {Dmel: FBgn0261698, SLO2, slowpoke 2, [Score=597, Expect=0.0]} {Celegans: WBGene00004831, slo-2, SLO-2 potassium channel; SLOwpoke potassium channel family, [Score=427, Expect=2e-140]} {Smed: dd_Smed_v6_9739_0_1, dd_Smed_v6_9739_0_1, [Score=645, Expect=0.0]} {RNA1509_17871} {RNA1310_3397} {RNA815_1330}

Cumulative graph for MligTC455_41841

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.942	0.712	1.00000	1.00000
RegionR2	1.443	0.712	1.00000	1.00000
RegionR3	0.056	0.712	1.00000	1.00000
RegionR4	-1.365	0.712	1.00000	1.00000
RegionR5	-0.522	0.712	0.99965	1.00000
RegionR6	0.111	0.712	1.00000	1.00000
RegionR7	0.551	0.712	1.00000	1.00000
RegionR8	0.668	0.712	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.783	0.712	1.00000	1.00000
RegenerationR2	2.301	0.712	0.13549	0.56272
RegenerationR3	4.31	0.712	0.06563	0.43108
RegenerationR4	2.872	0.712	0.10738	0.50494
RegenerationR5	3.258	0.712	0.07488	0.42811
RegenerationR6	4.307	0.712	0.07121	0.33360
RegenerationBL	5.055	0.712	0.02761	0.18410
RegenerationTP	0.531	0.712	1.00000	1.00000

Genes with expression patterns similar to MligTC455_41841

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41841	29	0.6	Mlig455_013806, Mlig455_070876	Neo: - Age: Up-Down-Down	KCNT1	1	-	-	-	-	1.000	-	Mlig455_013806 {REF} {Length: 6128} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=92.6]; Ion channel [PF07885.18, score=43.5]; TrkA-N domain [PF02254.20, score=24.8]} {Human: ENSG00000107147, KCNT1, potassium sodium-activated channel subfamily T member 1, [Score=1117, Expect=0.0]} {Mouse: ENSMUSG00000058740, Kcnt1, potassium channel, subfamily T, member 1, [Score=1100, Expect=0.0]} {Dmel: FBgn0261698, SLO2, slowpoke 2, [RH, Score=811, Expect=0.0]} {Celegans: WBGene00004831, slo-2, SLO-2 potassium channel; SLOwpoke potassium channel family, [Score=867, Expect=0.0]} {Smed: dd_Smed_v6_9739_0_1, dd_Smed_v6_9739_0_1, [RH, Score=1373, Expect=0.0]} {RNA1509_17871} {RNA1310_3397} {RNA815_1330} Mlig455_070876 {REF} {Length: 1195} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=94.6]; Ion channel [PF07885.18, score=45.8]; Ion transport protein [PF00520.33, score=18.7]} {Human: ENSG00000107147, KCNT1, potassium sodium-activated channel subfamily T member 1, [Score=513, Expect=4e-172]; ENSG00000162687, KCNT2, potassium sodium-activated channel subfamily T member 2, [Score=511, Expect=3e-172]} {Mouse: ENSMUSG00000052726, Kcnt2, potassium channel, subfamily T, member 2, [Score=509, Expect=9e-172]; ENSMUSG00000058740, Kcnt1, potassium channel, subfamily T, member 1, [Score=502, Expect=9e-168]} {Dmel: FBgn0261698, SLO2, slowpoke 2, [Score=597, Expect=0.0]} {Celegans: WBGene00004831, slo-2, SLO-2 potassium channel; SLOwpoke potassium channel family, [Score=427, Expect=2e-140]} {Smed: dd_Smed_v6_9739_0_1, dd_Smed_v6_9739_0_1, [Score=645, Expect=0.0]} {RNA1509_17871} {RNA1310_3397} {RNA815_1330}
2.	MligTC455_11170	47	0.98	Mlig455_043365	Neo: - Age: -		0.983	-	-	-	-	0.983	-	Mlig455_043365 {REF} {Length: 447} {NoTransDecoderORF} {RNA1310_99082}
3.	MligTC455_06421	132	2.76	Mlig455_004586, Mlig455_064760	Neo: - Age: Up-Up-Up, logFC(26M/2M)=0.750	SLC25A38	0.964	-	-	-	-	0.964	-	Mlig455_004586 {REF} {Length: 1889} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=143.1]} {Human: ENSG00000144659, SLC25A38, solute carrier family 25 member 38, [RH, Score=130, Expect=3e-35]} {Mouse: ENSMUSG00000032519, Slc25a38, solute carrier family 25, member 38, [RH, Score=127, Expect=6e-34]} {Dmel: FBgn0028646, aralar1, [Score=100, Expect=2e-23]} {Celegans: WBGene00020422, T10F2.2, [Score=62.8, Expect=4e-11]} {Smed: dd_Smed_v6_12659_0_1, dd_Smed_v6_12659_0_1, [RH, Score=149, Expect=4e-43]} {RNA1310_18015.1} {RNA815_19336} Mlig455_064760 {REF} {Length: 2003} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=142.8]} {Human: ENSG00000144659, SLC25A38, solute carrier family 25 member 38, [RH, Score=127, Expect=3e-34]} {Mouse: ENSMUSG00000032519, Slc25a38, solute carrier family 25, member 38, [RH, Score=124, Expect=6e-33]} {Dmel: FBgn0028646, aralar1, [Score=100, Expect=2e-23]} {Celegans: WBGene00020422, T10F2.2, [Score=62.8, Expect=4e-11]} {Smed: dd_Smed_v6_12659_0_1, dd_Smed_v6_12659_0_1, [RH, Score=147, Expect=1e-42]} {RNA1310_18015.1} {RNA815_19336}
4.	MligTC455_56446	14	0.3	Mlig455_034628	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_034628 {REF} {Length: 351} {NoTransDecoderORF} {RNA1509_33718} {RNA815_59691}
5.	MligTC455_25895	43	0.89	Mlig455_028806	Neo: - Age: -	SERINC3	0.956	-	-	-	-	0.956	-	Mlig455_028806 {REF} {Length: 2373} {TRANSSPLICED} {tRNA: Glu(CTC),pseudo, score=25.1} {Pfam: Serine incorporator (Serinc) [PF03348.17, score=512.0]} {Human: ENSG00000132824, SERINC3, serine incorporator 3, [RH, Score=412, Expect=2e-140]} {Mouse: ENSMUSG00000019877, Serinc1, serine incorporator 1, [RH, Score=411, Expect=2e-140]} {Dmel: FBgn0028399, TMS1, [RH, Score=350, Expect=2e-116]} {Celegans: WBGene00021956, Y57E12AL.1, [RH, Score=376, Expect=6e-127]} {Smed: dd_Smed_v6_1130_0_1, dd_Smed_v6_1130_0_1, [RH, Score=514, Expect=0.0]} {RNA1509_2559, RNA1509_58048} {RNA1310_16171, RNA1509_2559, RNA1509_58048} {RNA1509_2559, RNA1509_58048, RNA815_6171}