Data search
Results for MligTC455_41849
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41849 | 253 | 5.27 | Mlig455_062824 | Neo: Int S/G2/M Age: - |
KDM1A | Mlig455_062824 {REF} {Length: 3726} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=356.0]; SWIRM domain [PF04433.19, score=52.4]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=40.2]; FAD dependent oxidoreductase [PF01266.26, score=25.7]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=24.7]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=23.9]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=23.1]; FAD binding domain [PF00890.26, score=21.7]; HI0933-like protein [PF03486.16, score=20.1]; FAD binding domain [PF01494.21, score=18.1]} {Human: ENSG00000004487, KDM1A, lysine demethylase 1A, [RH, Score=681, Expect=0.0]} {Mouse: ENSMUSG00000036940, Kdm1a, lysine (K)-specific demethylase 1A, [RH, Score=683, Expect=0.0]} {Dmel: FBgn0260397, Su(var)3-3, Suppressor of variegation 3-3, [RH, Score=582, Expect=0.0]} {Celegans: WBGene00005010, spr-5, Probable lysine-specific histone demethylase 1, [RH, Score=191, Expect=4e-51]} {Smed: dd_Smed_v6_7431_0_4, dd_Smed_v6_7431_0_4, [RH, Score=314, Expect=2e-94]} {RNA1509_16203} {RNA1310_5633, RNA1509_16203} {RNA1509_16203, RNA815_14558} |
Cumulative graph for MligTC455_41849
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.151 | 2.802 | 0.04429 | 0.50707 | |
| RegionR2 | 1.488 | 2.802 | 0.12264 | 0.43383 | |
| RegionR3 | 1.059 | 2.802 | 0.20178 | 0.74176 | |
| RegionR4 | 0.29 | 2.802 | 0.72517 | 1.00000 | |
| RegionR5 | 0.735 | 2.802 | 0.38541 | 0.74051 | |
| RegionR6 | 0.684 | 2.802 | 0.47444 | 1.00000 | |
| RegionR7 | 1.119 | 2.802 | 0.29673 | 0.93185 | |
| RegionR8 | 1.776 | 2.802 | 0.10641 | 0.60853 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 7.89 | 2.802 | 0.06724 | 0.74504 | |
| RegenerationR2 | 0.827 | 2.802 | 0.14220 | 0.57273 | |
| RegenerationR3 | 1.804 | 2.802 | 0.00148 | 0.06316 | |
| RegenerationR4 | 1.506 | 2.802 | 0.00775 | 0.13005 | |
| RegenerationR5 | 1.592 | 2.802 | 0.00120 | 0.05779 | |
| RegenerationR6 | 1.918 | 2.802 | 0.00226 | 0.05393 | |
| RegenerationBL | 2.061 | 2.802 | 0.00168 | 0.03215 | |
| RegenerationTP | 1.327 | 2.802 | 0.07451 | 0.43676 |
Genes with expression patterns similar to MligTC455_41849
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41849 | 253 | 5.27 | Mlig455_062824 | Neo: Int S/G2/M Age: - |
KDM1A | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_062824 {REF} {Length: 3726} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=356.0]; SWIRM domain [PF04433.19, score=52.4]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=40.2]; FAD dependent oxidoreductase [PF01266.26, score=25.7]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=24.7]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=23.9]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=23.1]; FAD binding domain [PF00890.26, score=21.7]; HI0933-like protein [PF03486.16, score=20.1]; FAD binding domain [PF01494.21, score=18.1]} {Human: ENSG00000004487, KDM1A, lysine demethylase 1A, [RH, Score=681, Expect=0.0]} {Mouse: ENSMUSG00000036940, Kdm1a, lysine (K)-specific demethylase 1A, [RH, Score=683, Expect=0.0]} {Dmel: FBgn0260397, Su(var)3-3, Suppressor of variegation 3-3, [RH, Score=582, Expect=0.0]} {Celegans: WBGene00005010, spr-5, Probable lysine-specific histone demethylase 1, [RH, Score=191, Expect=4e-51]} {Smed: dd_Smed_v6_7431_0_4, dd_Smed_v6_7431_0_4, [RH, Score=314, Expect=2e-94]} {RNA1509_16203} {RNA1310_5633, RNA1509_16203} {RNA1509_16203, RNA815_14558} |
| 2. | MligTC455_28092 | 232 | 4.84 | Mlig455_016454 | Neo: - Age: - |
ZNF91 | 1.721 | 0.960 | - | - | - | - | 0.761 | Mlig455_016454 {REF} {Length: 5410} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=411.4]; Zinc finger, C2H2 type [PF00096.28, score=296.8]; C2H2-type zinc finger [PF13894.8, score=216.3]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=133.3]; Zinc-finger of C2H2 type [PF12874.9, score=111.7]; C2H2-type zinc finger [PF13912.8, score=45.4]; Family of unknown function (DUF5810) [PF19126.2, score=23.3]; C2H2-type zinc-finger domain [PF13909.8, score=21.3]; zinc-finger C2H2-type [PF16622.7, score=18.8]} {Human: ENSG00000167232, ZNF91, zinc finger protein 91, [Score=488, Expect=1e-154]; ENSG00000160321, ZNF208, zinc finger protein 208, [Score=482, Expect=1e-151]} {Mouse: ENSMUSG00000021510, Zfp729a, zinc finger protein 729a, [Score=426, Expect=1e-133]; ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=426, Expect=3e-135]; ENSMUSG00000058093, Zfp729b, zinc finger protein 729b, [Score=422, Expect=2e-131]; ENSMUSG00000068959, Zfp619, zinc finger protein 619, [Score=405, Expect=3e-124]} {Dmel: FBgn0020309, crol, crooked legs, [Score=245, Expect=3e-68]} {Celegans: WBGene00021931, Y55F3AM.14, [Score=154, Expect=1e-38]} {Smed: dd_Smed_v6_8871_0_1, dd_Smed_v6_8871_0_1, [Score=142, Expect=3e-34]} {RNA1509_58288} {RNA1310_6381} {RNA815_979} |
| 3. | MligTC455_33229 | 34920 | 727.49 | Mlig455_061272 | Neo: - Age: logFC(26M/2M)=-0.783 Region-enriched R8: 1.666/0.00844 |
1.7 | - | - | - | - | 0.951 | 0.749 | Mlig455_061272 {REF} {Length: 1026} {RNA1509_246} {RNA1310_75727, RNA1509_246} {RNA1509_246, RNA815_1838.2} | |
| 4. | MligTC455_18290 | 670 | 13.95 | Mlig455_060059 | Neo: - Age: - |
ERH | 0.968 | - | - | - | - | - | 0.968 | Mlig455_060059 {REF} {Length: 1218} {TRANSSPLICED} {Pfam: Enhancer of rudimentary [PF01133.19, score=133.2]} {Human: ENSG00000100632, ERH, ERH, mRNA splicing and mitosis factor, [Score=140, Expect=3e-44]} {Mouse: ENSMUSG00000021131, Erh, ERH mRNA splicing and mitosis factor, [Score=140, Expect=2e-44]; ENSMUSG00000063412, Gm10131, predicted pseudogene 10131, [Score=140, Expect=2e-44]} {Dmel: FBgn0011586, e(r), enhancer of rudimentary, [Score=135, Expect=1e-42]} {Celegans: WBGene00011892, T21C9.4, Enhancer of rudimentary homolog, [Score=112, Expect=2e-33]} {Smed: dd_Smed_v6_1146_0_1, dd_Smed_v6_1146_0_1, [Score=152, Expect=3e-49]} {RNA1509_13130} {RNA1310_58598} {RNA815_31976.1} |
| 5. | MligTC455_26142 | 172 | 3.58 | Mlig455_067839 | Neo: - Age: - |
0.967 | - | - | 0.967 | - | - | - | Mlig455_067839 {REF} {Length: 1999} {TRANSSPLICED} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=55.7]; Capsular polysaccharide synthesis protein [PF05704.14, score=19.8]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=142, Expect=6e-40]} {RNA1509_32086} {RNA1310_25663.1} {RNA815_8432} | |
| 6. | MligTC455_18289 | 1396 | 29.08 | Mlig455_049492, Mlig455_060049 | Neo: - Age: - |
ERH | 0.96 | - | - | - | - | - | 0.960 | Mlig455_049492 {REF} {Length: 1055} {TRANSSPLICED} {Pfam: Enhancer of rudimentary [PF01133.19, score=131.3]} {Human: ENSG00000100632, ERH, ERH, mRNA splicing and mitosis factor, [Score=138, Expect=2e-43]} {Mouse: ENSMUSG00000021131, Erh, ERH mRNA splicing and mitosis factor, [Score=138, Expect=1e-43]; ENSMUSG00000063412, Gm10131, predicted pseudogene 10131, [Score=138, Expect=1e-43]} {Dmel: FBgn0011586, e(r), enhancer of rudimentary, [Score=135, Expect=2e-42]} {Celegans: WBGene00011892, T21C9.4, Enhancer of rudimentary homolog, [Score=110, Expect=6e-33]} {Smed: dd_Smed_v6_1146_0_1, dd_Smed_v6_1146_0_1, [Score=150, Expect=1e-48]} {RNA1509_13130, RNA1509_6759} {RNA1310_61883, RNA1509_6759} {RNA1509_6759, RNA815_31976.2} Mlig455_060049 {REF} {Length: 2081} {TRANSSPLICED} {Pfam: Enhancer of rudimentary [PF01133.19, score=133.2]} {Human: ENSG00000100632, ERH, ERH, mRNA splicing and mitosis factor, [Score=140, Expect=3e-44]} {Mouse: ENSMUSG00000021131, Erh, ERH mRNA splicing and mitosis factor, [Score=140, Expect=2e-44]; ENSMUSG00000063412, Gm10131, predicted pseudogene 10131, [Score=140, Expect=2e-44]} {Dmel: FBgn0011586, e(r), enhancer of rudimentary, [Score=135, Expect=1e-42]} {Celegans: WBGene00011892, T21C9.4, Enhancer of rudimentary homolog, [Score=112, Expect=2e-33]} {Smed: dd_Smed_v6_1146_0_1, dd_Smed_v6_1146_0_1, [Score=152, Expect=3e-49]} {RNA1509_13130} {RNA1310_58598} {RNA815_31976.1} |
| 7. | MligTC455_42542 | 255 | 5.31 | Mlig455_024691 | Neo: Irradiation Age: - |
0.959 | 0.959 | - | - | - | - | - | Mlig455_024691 {REF} {Length: 1544} {TRANSSPLICED} {RNA1509_28702} {RNA1310_20632} {RNA815_8272} | |
| 8. | MligTC455_19039 | 44 | 0.92 | Mlig455_022002 | Neo: - Age: - |
0.957 | - | - | 0.957 | - | - | - | Mlig455_022002 {REF} {Length: 675} {NoTransDecoderORF} {RNA1310_112918} | |
| 9. | MligTC455_36493 | 43 | 0.89 | Mlig455_070548 | Neo: - Age: - |
0.951 | - | - | 0.951 | - | - | - | Mlig455_070548 {REF} {Length: 483} {NoTransDecoderORF} {RNA1509_34671} {RNA1310_65929} {RNA815_64882} |
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