TomoSeq data search

Data search

Results for MligTC455_41867

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_41867	3273	68.19	Mlig455_028744	Neo: - Age: Down-Up-Down Region-enriched R4: 1.029/0.00003	SSNA1	Mlig455_028744 {REF} {Length: 692} {TRANSSPLICED} {Human: ENSG00000176101, SSNA1, SS nuclear autoantigen 1, [RH, Score=137, Expect=1e-42]} {Mouse: ENSMUSG00000026966, Ssna1, SS nuclear autoantigen 1, [RH, Score=138, Expect=2e-43]} {Smed: dd_Smed_v6_3576_0_1, dd_Smed_v6_3576_0_1, [RH, Score=150, Expect=3e-48]} {RNA1509_29955} {RNA1310_38889} {RNA815_18293}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_41867

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.037	6.231	0.93496	1.00000
RegionR2	-0.109	6.231	0.63926	0.97750
RegionR3	0.606	6.231	0.00112	0.03242
RegionR4	1.029	6.231	0.00000	0.00003
RegionR5	0.492	6.231	0.00553	0.03747
RegionR6	0.098	6.231	0.62173	1.00000
RegionR7	-0.932	6.231	0.00060	0.02364
RegionR8	-1.146	6.231	0.00069	0.03580

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.343	6.231	0.04888	0.69549
RegenerationR2	0.111	6.231	0.59210	0.91172
RegenerationR3	-0.203	6.231	0.34340	0.76710
RegenerationR4	-0.219	6.231	0.31598	0.75525
RegenerationR5	-0.199	6.231	0.34090	0.75837
RegenerationR6	-0.223	6.231	0.33440	0.68049
RegenerationBL	0.016	6.231	0.95403	1.00000
RegenerationTP	0.337	6.231	0.28256	0.73016

Genes with expression patterns similar to MligTC455_41867

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41867	3273	68.19	Mlig455_028744	Neo: - Age: Down-Up-Down Region-enriched R4: 1.029/0.00003	SSNA1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_028744 {REF} {Length: 692} {TRANSSPLICED} {Human: ENSG00000176101, SSNA1, SS nuclear autoantigen 1, [RH, Score=137, Expect=1e-42]} {Mouse: ENSMUSG00000026966, Ssna1, SS nuclear autoantigen 1, [RH, Score=138, Expect=2e-43]} {Smed: dd_Smed_v6_3576_0_1, dd_Smed_v6_3576_0_1, [RH, Score=150, Expect=3e-48]} {RNA1509_29955} {RNA1310_38889} {RNA815_18293}
2.	MligTC455_21091	1066	22.21	Mlig455_045138	Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.653	TRPM1	0.955	-	-	-	-	-	0.955	Mlig455_045138 {REF} {Length: 4149} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=64.1]; Ankyrin repeats (many copies) [PF13637.8, score=58.6]; Ankyrin repeats (many copies) [PF13857.8, score=52.1]; Ion transport protein [PF00520.33, score=47.2]; Ankyrin repeat [PF13606.8, score=38.6]; Ankyrin repeat [PF00023.32, score=35.0]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=161, Expect=2e-39]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=161, Expect=2e-39]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=154, Expect=5e-37]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=157, Expect=3e-38]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=153, Expect=5e-37]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=117, Expect=3e-26]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=82.4, Expect=1e-15]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=179, Expect=9e-46]} {RNA1509_3562} {RNA1310_2118.1} {RNA815_362.1}
3.	MligTC455_08564	389	8.09	Mlig455_068459	Neo: - Age: -	HPGD	0.953	-	-	-	-	0.953	-	Mlig455_068459 {REF} {Length: 2141} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=152.1]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=109.7]; KR domain [PF08659.12, score=33.4]; NAD dependent epimerase/dehydratase family [PF01370.23, score=28.2]; Polysaccharide biosynthesis protein [PF02719.17, score=23.4]; GDP-mannose 4,6 dehydratase [PF16363.7, score=21.5]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=20.2]} {Human: ENSG00000164120, HPGD, 15-hydroxyprostaglandin dehydrogenase, [RH, Score=163, Expect=7e-49]} {Mouse: ENSMUSG00000031613, Hpgd, hydroxyprostaglandin dehydrogenase 15 (NAD), [RH, Score=165, Expect=1e-49]} {Dmel: FBgn0011693, Pdh, Photoreceptor dehydrogenase, [RH, Score=115, Expect=2e-30]} {Celegans: WBGene00000968, dhs-4, DeHydrogenases, Short chain, [Score=94.4, Expect=1e-22]} {Smed: dd_Smed_v6_2263_0_1, dd_Smed_v6_2263_0_1, [Score=65.5, Expect=1e-12]} {RNA1509_35301} {RNA1310_40392} {RNA815_8749.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_41867

3273

68.19

Mlig455_028744

Neo: -

Age: Down-Up-Down

Region-enriched R4: 1.029/0.00003

SSNA1

1.000

MligTC455_21091

1066

22.21

Mlig455_045138

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.653

TRPM1

0.955

Mlig455_045138 {REF} {Length: 4149} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=64.1]; Ankyrin repeats (many copies) [PF13637.8, score=58.6]; Ankyrin repeats (many copies) [PF13857.8, score=52.1]; Ion transport protein [PF00520.33, score=47.2]; Ankyrin repeat [PF13606.8, score=38.6]; Ankyrin repeat [PF00023.32, score=35.0]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=161, Expect=2e-39]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=161, Expect=2e-39]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=154, Expect=5e-37]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=157, Expect=3e-38]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=153, Expect=5e-37]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=117, Expect=3e-26]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=82.4, Expect=1e-15]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=179, Expect=9e-46]} {RNA1509_3562} {RNA1310_2118.1} {RNA815_362.1}

MligTC455_08564

389

8.09

Mlig455_068459

Neo: -

Age: -

HPGD

0.953

Mlig455_068459 {REF} {Length: 2141} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=152.1]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=109.7]; KR domain [PF08659.12, score=33.4]; NAD dependent epimerase/dehydratase family [PF01370.23, score=28.2]; Polysaccharide biosynthesis protein [PF02719.17, score=23.4]; GDP-mannose 4,6 dehydratase [PF16363.7, score=21.5]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=20.2]} {Human: ENSG00000164120, HPGD, 15-hydroxyprostaglandin dehydrogenase, [RH, Score=163, Expect=7e-49]} {Mouse: ENSMUSG00000031613, Hpgd, hydroxyprostaglandin dehydrogenase 15 (NAD), [RH, Score=165, Expect=1e-49]} {Dmel: FBgn0011693, Pdh, Photoreceptor dehydrogenase, [RH, Score=115, Expect=2e-30]} {Celegans: WBGene00000968, dhs-4, DeHydrogenases, Short chain, [Score=94.4, Expect=1e-22]} {Smed: dd_Smed_v6_2263_0_1, dd_Smed_v6_2263_0_1, [Score=65.5, Expect=1e-12]} {RNA1509_35301} {RNA1310_40392} {RNA815_8749.1}