TomoSeq data search

Data search

Results for MligTC455_41877

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41877

436

9.08

Mlig455_042451

Neo: -

Age: -

Mlig455_042451 {REF} {Length: 3530} {TRANSSPLICED} {Smed: dd_Smed_v6_11378_0_1, dd_Smed_v6_11378_0_1, [Score=88.6, Expect=8e-18]} {RNA1509_26750, RNA1509_27279, RNA1509_44398, RNA1509_56686} {RNA1310_8129, RNA1509_26750, RNA1509_27279, RNA1509_44398, RNA1509_56686} {RNA1509_26750, RNA1509_27279, RNA1509_44398, RNA1509_56686, RNA815_5535}

Cumulative graph for MligTC455_41877

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.497	3.438	0.15628	0.77495
RegionR2	-0.198	3.438	0.74007	1.00000
RegionR3	-0.141	3.438	0.74818	1.00000
RegionR4	-0.101	3.438	0.86434	1.00000
RegionR5	-0.052	3.438	0.89517	1.00000
RegionR6	-0.581	3.438	0.22449	0.80628
RegionR7	-0.076	3.438	0.89136	1.00000
RegionR8	-0.348	3.438	0.62013	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-6.448	3.438	0.13776	0.87412
RegenerationR2	0.926	3.438	0.07062	0.43130
RegenerationR3	0.351	3.438	0.53529	0.87457
RegenerationR4	0.28	3.438	0.63541	0.92539
RegenerationR5	0.884	3.438	0.07330	0.42436
RegenerationR6	0.846	3.438	0.16432	0.49403
RegenerationBL	1.522	3.438	0.01777	0.14273
RegenerationTP	-1.357	3.438	0.13211	0.54636

Genes with expression patterns similar to MligTC455_41877

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41877	436	9.08	Mlig455_042451	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_042451 {REF} {Length: 3530} {TRANSSPLICED} {Smed: dd_Smed_v6_11378_0_1, dd_Smed_v6_11378_0_1, [Score=88.6, Expect=8e-18]} {RNA1509_26750, RNA1509_27279, RNA1509_44398, RNA1509_56686} {RNA1310_8129, RNA1509_26750, RNA1509_27279, RNA1509_44398, RNA1509_56686} {RNA1509_26750, RNA1509_27279, RNA1509_44398, RNA1509_56686, RNA815_5535}
2.	MligTC455_51170	1331	27.74	Mlig455_029305, Mlig455_029328	Neo: Int S/G2/M Age: -	FAM98A	1.88	-	-	-	0.911	-	0.969	Mlig455_029305 {REF} {Length: 2999} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF2465) [PF10239.11, score=263.2]} {Human: ENSG00000119812, FAM98A, family with sequence similarity 98 member A, [RH, Score=174, Expect=3e-48]} {Mouse: ENSMUSG00000002017, Fam98a, family with sequence similarity 98, member A, [RH, Score=171, Expect=2e-47]} {Smed: dd_Smed_v6_5345_0_1, dd_Smed_v6_5345_0_1, [RH, Score=184, Expect=7e-53]} {RNA1509_14032, RNA1509_15449} {RNA1310_20527, RNA1509_15449} {RNA1509_15449, RNA815_42317} Mlig455_029328 {REF} {Length: 2925} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF2465) [PF10239.11, score=261.9]} {Human: ENSG00000119812, FAM98A, family with sequence similarity 98 member A, [Score=174, Expect=5e-48]} {Mouse: ENSMUSG00000002017, Fam98a, family with sequence similarity 98, member A, [RH, Score=173, Expect=5e-48]} {Smed: dd_Smed_v6_5345_0_1, dd_Smed_v6_5345_0_1, [RH, Score=184, Expect=5e-53]} {RNA1509_14032, RNA1509_35497} {RNA1310_20527, RNA1509_14032, RNA1509_35497} {RNA1509_14032, RNA1509_35497, RNA815_42317}
3.	MligTC455_47004	371	7.72	Mlig455_007268	Neo: - Age: Down-Up-Up	OGFOD1	1.867	0.915	-	-	-	-	0.952	Mlig455_007268 {REF} {Length: 1419} {Pfam: Oxoglutarate and iron-dependent oxygenase degradation C-term [PF10637.11, score=46.5]} {Human: ENSG00000087263, OGFOD1, 2-oxoglutarate and iron dependent oxygenase domain containing 1, [Score=86.3, Expect=5e-19]} {Mouse: ENSMUSG00000033009, Ogfod1, 2-oxoglutarate and iron-dependent oxygenase domain containing 1, [Score=85.5, Expect=6e-19]} {RNA1509_32662, RNA1509_50798} {RNA1310_19206, RNA1509_32662, RNA1509_50798} {RNA1509_32662, RNA1509_50798, RNA815_18604}
4.	MligTC455_47215	1067	22.24	Mlig455_020254	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.186	PSKH1	1.739	-	-	-	0.778	0.961	-	Mlig455_020254 {REF} {Length: 2236} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=124.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=54.5]} {Human: ENSG00000159792, PSKH1, protein serine kinase H1, [Score=139, Expect=2e-36]} {Mouse: ENSMUSG00000048310, Pskh1, protein serine kinase H1, [Score=139, Expect=1e-36]} {Dmel: FBgn0264607, CaMKII, Calcium/calmodulin-dependent protein kinase II, [Score=93.2, Expect=3e-20]} {Celegans: WBGene00019911, R06A10.4, [Score=120, Expect=3e-30]} {Smed: dd_Smed_v6_11695_0_1, dd_Smed_v6_11695_0_1, [Score=101, Expect=4e-24]} {RNA1509_14037, RNA1509_37045, RNA1509_45755, RNA1509_49443, RNA1509_56608} {RNA1310_15171.1, RNA1509_14037, RNA1509_37045, RNA1509_45755, RNA1509_49443, RNA1509_56608} {RNA1509_14037, RNA1509_37045, RNA1509_45755, RNA1509_49443, RNA1509_56608, RNA815_22152}
5.	MligTC455_17145	702	14.63	Mlig455_056467	Neo: Int S/G2/M Age: -	PGLS	1.66	-	-	0.703	-	-	0.957	Mlig455_056467 {REF} {Length: 3338} {TRANSSPLICED} {Pfam: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase [PF01182.22, score=199.7]} {Human: ENSG00000130313, PGLS, 6-phosphogluconolactonase, [RH, Score=166, Expect=4e-50]} {Mouse: ENSMUSG00000031807, Pgls, 6-phosphogluconolactonase, [RH, Score=165, Expect=5e-50]} {Dmel: FBgn0030239, CG17333, [RH, Score=153, Expect=1e-45]} {Celegans: WBGene00013301, Y57G11C.3, Putative 6-phosphogluconolactonase, [RH, Score=105, Expect=6e-27]} {Smed: dd_Smed_v6_7692_0_1, dd_Smed_v6_7692_0_1, [RH, Score=126, Expect=2e-35]} {RNA1509_16180, RNA1509_19348, RNA1509_34841} {RNA1310_27930.1, RNA1509_16180, RNA1509_19348, RNA1509_34841} {RNA1509_16180, RNA1509_19348, RNA1509_34841, RNA815_18029}
6.	MligTC455_19143	186	3.86	Mlig455_040116	Neo: - Age: -		0.966	-	-	-	-	-	0.966	Mlig455_040116 {REF} {Length: 6995} {Smed: dd_Smed_v6_11519_0_1, dd_Smed_v6_11519_0_1, [RH, Score=600, Expect=0.0]} {RNA1509_43828, RNA1509_5002} {RNA1310_824.1, RNA1509_43828} {RNA1509_43828, RNA815_15829}
7.	MligTC455_51741	302	6.3	Mlig455_056929	Neo: Int S/G2/M Age: - Region-enriched R5: 1.274/0.02075	MARS	0.965	-	-	-	-	-	0.965	Mlig455_056929 {REF} {Length: 3549} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=28.8} {Pfam: tRNA synthetases class I (M) [PF09334.13, score=495.0]; Anticodon binding domain of methionyl tRNA ligase [PF19303.1, score=52.7]; tRNA synthetases class I (I, L, M and V) [PF00133.24, score=40.2]} {Human: ENSG00000166986, MARS, methionyl-tRNA synthetase, [RH, Score=798, Expect=0.0]} {Mouse: ENSMUSG00000046994, Mars2, methionine-tRNA synthetase 2 (mitochondrial), [Score=113, Expect=1e-25]} {Dmel: FBgn0034401, MetRS, Methionyl-tRNA synthetase, [RH, Score=739, Expect=0.0]} {Celegans: WBGene00003415, mars-1, Methionine--tRNA ligase, cytoplasmic, [RH, Score=697, Expect=0.0]} {Smed: dd_Smed_v6_3471_0_1, dd_Smed_v6_3471_0_1, [RH, Score=665, Expect=0.0]} {RNA1509_13317, RNA1509_40640} {RNA1310_13250.1, RNA1509_13317, RNA1509_40640} {RNA1509_13317, RNA1509_40640, RNA815_453.1}
8.	MligTC455_23260	367	7.64	Mlig455_048753	Neo: Int S/G2/M Age: Up-Down-Up Region-enriched R5: 2.722/0.00477 Region-enriched R4: 2.692/0.02061	MCPH1	0.962	-	-	-	-	-	0.962	Mlig455_048753 {REF} {Length: 5462} {TRANSSPLICED} {Pfam: BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=49.9]; twin BRCT domain [PF12738.9, score=38.5]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=35.9]; BRCA1 C Terminus (BRCT) domain [PF18428.3, score=22.5]} {Human: ENSG00000285262, MCPH1, microcephalin 1, [RH, Score=59.7, Expect=2e-08]; ENSG00000147316, MCPH1, microcephalin 1, [RH, Score=59.7, Expect=2e-08]} {Mouse: ENSMUSG00000039842, Mcph1, microcephaly, primary autosomal recessive 1, [RH, Score=56.2, Expect=2e-07]} {Dmel: FBgn0260959, MCPH1, Microcephalin, [RH, Score=71.6, Expect=3e-12]} {Smed: dd_Smed_v6_14029_0_1, dd_Smed_v6_14029_0_1, [RH, Score=99.4, Expect=6e-21]} {RNA1509_8517} {RNA1310_2320.1, RNA1509_8517} {RNA1509_8517, RNA815_744}
9.	MligTC455_46980	242	5.04	Mlig455_068084	Neo: - Age: Up-Up-Down, logFC(26M/2M)=0.909 Region-enriched R5: 2.025/0.02232	SLC25A51	0.96	-	-	-	-	-	0.960	Mlig455_068084 {REF} {Length: 2595} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=115.8]} {Human: ENSG00000122696, SLC25A51, solute carrier family 25 member 51, [RH, Score=214, Expect=8e-68]} {Mouse: ENSMUSG00000045973, Slc25a51, solute carrier family 25, member 51, [RH, Score=208, Expect=8e-66]} {Dmel: FBgn0039741, CG7943, [RH, Score=177, Expect=2e-53]} {Celegans: WBGene00011858, T20D3.5, [RH, Score=141, Expect=8e-41]} {Smed: dd_Smed_v6_8610_0_1, dd_Smed_v6_8610_0_1, [RH, Score=183, Expect=1e-56]} {RNA1509_15551} {RNA1310_23947} {RNA815_5386}
10.	MligTC455_19137	807	16.82	Mlig455_067132	Neo: Irradiation Age: -	KDM4C	0.956	-	-	-	-	0.956	-	Mlig455_067132 {REF} {Length: 4923} {TRANSSPLICED} {Pfam: JmjC domain, hydroxylase [PF02373.24, score=145.4]; PHD-zinc-finger like domain [PF13832.8, score=57.1]; jmjN domain [PF02375.19, score=52.4]; PHD-finger [PF13831.8, score=36.5]; Jumonji domain-containing protein 2A Tudor domain [PF18104.3, score=34.5]; PHD-finger [PF00628.31, score=29.8]; PHD-like zinc-binding domain [PF13771.8, score=26.1]; Domain of unknown function (DUF4537) [PF15057.8, score=22.1]; DNA repair protein Crb2 Tudor domain [PF18115.3, score=18.9]} {Human: ENSG00000107077, KDM4C, lysine demethylase 4C, [RH, Score=479, Expect=5e-151]; ENSG00000066135, KDM4A, lysine demethylase 4A, [RH, Score=475, Expect=7e-147]; ENSG00000127663, KDM4B, lysine demethylase 4B, [RH, Score=462, Expect=4e-141]} {Mouse: ENSMUSG00000033326, Kdm4a, lysine (K)-specific demethylase 4A, [RH, Score=476, Expect=4e-147]; ENSMUSG00000028397, Kdm4c, lysine (K)-specific demethylase 4C, [RH, Score=473, Expect=4e-146]; ENSMUSG00000024201, Kdm4b, lysine (K)-specific demethylase 4B, [RH, Score=467, Expect=3e-144]} {Dmel: FBgn0053182, Kdm4B, Lysine (K)-specific demethylase 4B, [RH, Score=474, Expect=6e-151]} {Celegans: WBGene00012982, jmjd-2, Lysine-specific demethylase 4, [RH, Score=328, Expect=3e-95]} {Smed: dd_Smed_v6_10398_0_1, dd_Smed_v6_10398_0_1, [RH, Score=523, Expect=5e-167]} {RNA1509_11069, RNA1509_19042, RNA1509_37896, RNA1509_42721} {RNA1310_1204, RNA1509_11069, RNA1509_19042, RNA1509_37896, RNA1509_42721} {RNA1509_11069, RNA1509_19042, RNA1509_37896, RNA1509_42721, RNA815_6410}
11.	MligTC455_43171	1167	24.31	Mlig455_061729, Mlig455_061758	Neo: - Age: -	SEC23IP	0.954	-	-	-	-	-	0.954	Mlig455_061729 {REF} {Length: 4216} {TRANSSPLICED} {Pfam: DDHD domain [PF02862.19, score=147.9]; SAM domain (Sterile alpha motif) [PF00536.32, score=32.4]} {Human: ENSG00000107651, SEC23IP, SEC23 interacting protein, [Score=400, Expect=3e-122]} {Mouse: ENSMUSG00000055319, Sec23ip, Sec23 interacting protein, [Score=404, Expect=1e-123]} {Dmel: FBgn0031990, PAPLA1, Phosphatidic Acid Phospholipase A1, [Score=318, Expect=1e-89]} {Celegans: WBGene00019747, ipla-1, Intracelllar PhosphoLipase A family; Intracellular phospholipase A1, [Score=99.8, Expect=5e-21]} {Smed: dd_Smed_v6_4014_0_1, dd_Smed_v6_4014_0_1, [Score=222, Expect=3e-59]} {RNA1509_13804, RNA1509_15441} {RNA1310_13226, RNA1509_13804, RNA1509_15441} {RNA1509_13804, RNA1509_15441, RNA815_26293} Mlig455_061758 {REF} {Length: 5318} {TRANSSPLICED} {Pfam: DDHD domain [PF02862.19, score=147.6]; SAM domain (Sterile alpha motif) [PF00536.32, score=32.4]} {Human: ENSG00000107651, SEC23IP, SEC23 interacting protein, [Score=400, Expect=7e-122]} {Mouse: ENSMUSG00000055319, Sec23ip, Sec23 interacting protein, [Score=402, Expect=5e-123]} {Dmel: FBgn0031990, PAPLA1, Phosphatidic Acid Phospholipase A1, [Score=319, Expect=4e-90]} {Celegans: WBGene00019747, ipla-1, Intracelllar PhosphoLipase A family; Intracellular phospholipase A1, [Score=96.3, Expect=5e-20]} {Smed: dd_Smed_v6_4014_0_1, dd_Smed_v6_4014_0_1, [Score=224, Expect=6e-60]} {RNA1509_13804} {RNA1310_13226} {RNA815_26293}
12.	MligTC455_45481	213	4.44	Mlig455_041828	Neo: - Age: - Region-enriched R5: 2.099/0.00443	WDR4	0.953	-	-	-	-	-	0.953	Mlig455_041828 {REF} {Length: 2436} {TRANSSPLICED} {Human: ENSG00000160193, WDR4, WD repeat domain 4, [Score=73.2, Expect=2e-13]} {Mouse: ENSMUSG00000024037, Wdr4, WD repeat domain 4, [RH, Score=73.6, Expect=1e-13]} {Smed: dd_Smed_v6_11186_0_1, dd_Smed_v6_11186_0_1, [Score=80.9, Expect=1e-16]} {RNA1310_24007} {RNA815_9753}
13.	MligTC455_53536	6320	131.67	Mlig455_046722, Mlig455_046837, Mlig455_046844	Neo: - Age: logFC(26M/2M)=0.195 Regeneration-upregulated BL: 2.033 Regeneration-enriched BL: 2.033	HNRNPH1, HNRNPH2	0.952	-	-	-	-	-	0.952	Mlig455_046722 {REF} {Length: 2332} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=111.4]} {Human: ENSG00000169045, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=8e-68]; ENSG00000126945, HNRNPH2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=226, Expect=4e-68]; ENSG00000284254, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=8e-68]; ENSG00000169813, HNRNPF, heterogeneous nuclear ribonucleoprotein F, [RH, Score=223, Expect=4e-67]} {Mouse: ENSMUSG00000045427, Hnrnph2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=230, Expect=1e-69]; ENSMUSG00000007850, Hnrnph1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=5e-68]; ENSMUSG00000042079, Hnrnpf, heterogeneous nuclear ribonucleoprotein F, [RH, Score=223, Expect=3e-67]} {Dmel: FBgn0259139, glo, glorund, [RH, Score=132, Expect=7e-33]} {Celegans: WBGene00006367, sym-2, RNA-binding protein sym-2, [Score=112, Expect=3e-27]} {Smed: dd_Smed_v6_1957_0_1, dd_Smed_v6_1957_0_1, [RH, Score=167, Expect=3e-47]} {RNA1509_3891} {RNA1310_9870.1} {RNA815_3405} Mlig455_046837 {REF} {Length: 2331} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=110.3]} {Human: ENSG00000126945, HNRNPH2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=226, Expect=4e-68]; ENSG00000284254, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=6e-68]; ENSG00000169045, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=6e-68]; ENSG00000169813, HNRNPF, heterogeneous nuclear ribonucleoprotein F, [RH, Score=223, Expect=4e-67]} {Mouse: ENSMUSG00000045427, Hnrnph2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=230, Expect=1e-69]; ENSMUSG00000007850, Hnrnph1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=4e-68]; ENSMUSG00000042079, Hnrnpf, heterogeneous nuclear ribonucleoprotein F, [RH, Score=223, Expect=3e-67]} {Dmel: FBgn0259139, glo, glorund, [RH, Score=133, Expect=4e-33]} {Celegans: WBGene00022253, hrpf-2, HnRNP F homolog, [RH, Score=129, Expect=6e-32]} {Smed: dd_Smed_v6_1957_0_1, dd_Smed_v6_1957_0_1, [RH, Score=167, Expect=3e-47]} {RNA1509_3891} {RNA1310_9870.1, RNA1509_3891} {RNA1509_3891, RNA815_3405} Mlig455_046844 {REF} {Length: 2331} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=110.2]} {Human: ENSG00000284254, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=224, Expect=1e-67]; ENSG00000126945, HNRNPH2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=224, Expect=3e-67]; ENSG00000169045, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=224, Expect=1e-67]; ENSG00000169813, HNRNPF, heterogeneous nuclear ribonucleoprotein F, [RH, Score=219, Expect=7e-66]} {Mouse: ENSMUSG00000045427, Hnrnph2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=228, Expect=7e-69]; ENSMUSG00000007850, Hnrnph1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=224, Expect=2e-67]; ENSMUSG00000042079, Hnrnpf, heterogeneous nuclear ribonucleoprotein F, [RH, Score=220, Expect=4e-66]} {Dmel: FBgn0259139, glo, glorund, [RH, Score=133, Expect=4e-33]} {Celegans: WBGene00022253, hrpf-2, HnRNP F homolog, [RH, Score=129, Expect=6e-32]} {Smed: dd_Smed_v6_1957_0_1, dd_Smed_v6_1957_0_1, [RH, Score=167, Expect=2e-47]} {RNA1509_3891} {RNA1310_9870.1} {RNA815_3405}
14.	MligTC455_19687	194	4.04	Mlig455_037623	Neo: - Age: -	CCNQ	0.951	-	-	-	-	-	0.951	Mlig455_037623 {REF} {Length: 2275} {TRANSSPLICED} {Human: ENSG00000262919, CCNQ, cyclin Q, [Score=87.4, Expect=9e-21]} {Mouse: ENSMUSG00000049489, Ccnq, cyclin Q, [Score=84.3, Expect=1e-19]} {RNA1509_34677} {RNA1310_40105.1} {RNA815_11835}
15.	MligTC455_20999	218	4.54	Mlig455_024240	Neo: - Age: -	SEC31A	0.95	-	-	-	-	-	0.950	Mlig455_024240 {REF} {Length: 6015} {TRANSSPLICED} {Human: ENSG00000138674, SEC31A, SEC31 homolog A, COPII coat complex component, [Score=216, Expect=2e-56]} {Mouse: ENSMUSG00000035325, Sec31a, Sec31 homolog A (S. cerevisiae), [Score=220, Expect=8e-58]} {Dmel: FBgn0033339, Sec31, Secretory 31, [Score=196, Expect=2e-50]} {Smed: dd_Smed_v6_4230_0_1, dd_Smed_v6_4230_0_1, [Score=170, Expect=1e-42]} {RNA1509_30287} {RNA1310_2250.1} {RNA815_3184}

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