TomoSeq data search

Data search

Results for MligTC455_41897

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_41897	203	4.23	Mlig455_023419, Mlig455_023446	Neo: - Age: Down-Up-Down	SERPINA5, SERPINB9	Mlig455_023419 {REF} {Length: 1807} {TRANSSPLICED} {Pfam: Serpin (serine protease inhibitor) [PF00079.22, score=263.7]} {Human: ENSG00000170542, SERPINB9, serpin family B member 9, [Score=140, Expect=2e-37]; ENSG00000196136, SERPINA3, serpin family A member 3, [Score=139, Expect=1e-36]} {Mouse: ENSMUSG00000079049, Serpinb1c, serine (or cysteine) peptidase inhibitor, clade B, member 1c, [Score=153, Expect=3e-42]; ENSMUSG00000052180, Serpinb6c, serine (or cysteine) peptidase inhibitor, clade B, member 6c, [Score=152, Expect=8e-42]; ENSMUSG00000071177, Serpina1d, serine (or cysteine) peptidase inhibitor, clade A, member 1D, [Score=150, Expect=8e-41]; ENSMUSG00000069248, Serpinb6e, serine (or cysteine) peptidase inhibitor, clade B, member 6e, [Score=149, Expect=2e-40]; ENSMUSG00000045827, Serpinb9, serine (or cysteine) peptidase inhibitor, clade B, member 9, [Score=148, Expect=1e-40]; ENSMUSG00000072849, Serpina1e, serine (or cysteine) peptidase inhibitor, clade A, member 1E, [Score=147, Expect=1e-39]; ENSMUSG00000047889, Serpinb6d, serine (or cysteine) peptidase inhibitor, clade B, member 6d, [Score=147, Expect=4e-40]; ENSMUSG00000066366, Serpina1a, serine (or cysteine) peptidase inhibitor, clade A, member 1A, [Score=147, Expect=9e-40]; ENSMUSG00000079014, Serpina3i, serine (or cysteine) peptidase inhibitor, clade A, member 3I, [Score=146, Expect=2e-39]} {Dmel: FBgn0024294, Spn43Aa, Serpin 43Aa, [Score=136, Expect=4e-36]} {Celegans: WBGene00005647, srp-6, SeRPin; Serine or cysteine protease inhibitor, [Score=120, Expect=3e-30]} {Smed: dd_Smed_v6_3824_0_1, dd_Smed_v6_3824_0_1, [Score=151, Expect=6e-42]} {RNA1509_51092} {RNA1310_18900.2} {RNA815_5079.1} Mlig455_023446 {REF} {Length: 2181} {TRANSSPLICED} {Pfam: Serpin (serine protease inhibitor) [PF00079.22, score=96.9]} {Human: ENSG00000188488, SERPINA5, serpin family A member 5, [Score=67.4, Expect=2e-12]} {Mouse: ENSMUSG00000079014, Serpina3i, serine (or cysteine) peptidase inhibitor, clade A, member 3I, [Score=73.2, Expect=1e-14]; ENSMUSG00000071177, Serpina1d, serine (or cysteine) peptidase inhibitor, clade A, member 1D, [Score=72.8, Expect=1e-14]; ENSMUSG00000069248, Serpinb6e, serine (or cysteine) peptidase inhibitor, clade B, member 6e, [Score=71.6, Expect=3e-14]} {Dmel: FBgn0028983, Spn55B, Serpin 55B, [Score=72.0, Expect=1e-14]} {Celegans: WBGene00005642, srp-1, SeRPin; Serine or cysteine protease inhibitor, [Score=76.6, Expect=3e-16]} {Smed: dd_Smed_v6_3824_0_1, dd_Smed_v6_3824_0_1, [Score=75.9, Expect=5e-16]} {RNA1509_51092} {RNA1310_18900.2} {RNA815_5079.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41897

203

4.23

Mlig455_023419, Mlig455_023446

Neo: -

Age: Down-Up-Down

SERPINA5, SERPINB9

Mlig455_023419 {REF} {Length: 1807} {TRANSSPLICED} {Pfam: Serpin (serine protease inhibitor) [PF00079.22, score=263.7]} {Human: ENSG00000170542, SERPINB9, serpin family B member 9, [Score=140, Expect=2e-37]; ENSG00000196136, SERPINA3, serpin family A member 3, [Score=139, Expect=1e-36]} {Mouse: ENSMUSG00000079049, Serpinb1c, serine (or cysteine) peptidase inhibitor, clade B, member 1c, [Score=153, Expect=3e-42]; ENSMUSG00000052180, Serpinb6c, serine (or cysteine) peptidase inhibitor, clade B, member 6c, [Score=152, Expect=8e-42]; ENSMUSG00000071177, Serpina1d, serine (or cysteine) peptidase inhibitor, clade A, member 1D, [Score=150, Expect=8e-41]; ENSMUSG00000069248, Serpinb6e, serine (or cysteine) peptidase inhibitor, clade B, member 6e, [Score=149, Expect=2e-40]; ENSMUSG00000045827, Serpinb9, serine (or cysteine) peptidase inhibitor, clade B, member 9, [Score=148, Expect=1e-40]; ENSMUSG00000072849, Serpina1e, serine (or cysteine) peptidase inhibitor, clade A, member 1E, [Score=147, Expect=1e-39]; ENSMUSG00000047889, Serpinb6d, serine (or cysteine) peptidase inhibitor, clade B, member 6d, [Score=147, Expect=4e-40]; ENSMUSG00000066366, Serpina1a, serine (or cysteine) peptidase inhibitor, clade A, member 1A, [Score=147, Expect=9e-40]; ENSMUSG00000079014, Serpina3i, serine (or cysteine) peptidase inhibitor, clade A, member 3I, [Score=146, Expect=2e-39]} {Dmel: FBgn0024294, Spn43Aa, Serpin 43Aa, [Score=136, Expect=4e-36]} {Celegans: WBGene00005647, srp-6, SeRPin; Serine or cysteine protease inhibitor, [Score=120, Expect=3e-30]} {Smed: dd_Smed_v6_3824_0_1, dd_Smed_v6_3824_0_1, [Score=151, Expect=6e-42]} {RNA1509_51092} {RNA1310_18900.2} {RNA815_5079.1}

Mlig455_023446 {REF} {Length: 2181} {TRANSSPLICED} {Pfam: Serpin (serine protease inhibitor) [PF00079.22, score=96.9]} {Human: ENSG00000188488, SERPINA5, serpin family A member 5, [Score=67.4, Expect=2e-12]} {Mouse: ENSMUSG00000079014, Serpina3i, serine (or cysteine) peptidase inhibitor, clade A, member 3I, [Score=73.2, Expect=1e-14]; ENSMUSG00000071177, Serpina1d, serine (or cysteine) peptidase inhibitor, clade A, member 1D, [Score=72.8, Expect=1e-14]; ENSMUSG00000069248, Serpinb6e, serine (or cysteine) peptidase inhibitor, clade B, member 6e, [Score=71.6, Expect=3e-14]} {Dmel: FBgn0028983, Spn55B, Serpin 55B, [Score=72.0, Expect=1e-14]} {Celegans: WBGene00005642, srp-1, SeRPin; Serine or cysteine protease inhibitor, [Score=76.6, Expect=3e-16]} {Smed: dd_Smed_v6_3824_0_1, dd_Smed_v6_3824_0_1, [Score=75.9, Expect=5e-16]} {RNA1509_51092} {RNA1310_18900.2} {RNA815_5079.1}

Cumulative graph for MligTC455_41897

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-7.288	2.861	1.00000	1.00000
RegionR2	3.64	2.861	0.00442	0.05930
RegionR3	1.651	2.861	0.14904	0.65505
RegionR4	-0.603	2.861	0.88005	1.00000
RegionR5	1.883	2.861	0.07482	0.24971
RegionR6	2.048	2.861	0.06203	0.46682
RegionR7	2.914	2.861	0.01157	0.18791
RegionR8	-4.246	2.861	0.99970	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	3.894	2.861	1.00000	1.00000
RegenerationR2	-0.552	2.861	0.53216	0.88545
RegenerationR3	1.591	2.861	0.09887	0.50247
RegenerationR4	2.178	2.861	0.03352	0.29510
RegenerationR5	0.671	2.861	0.41738	0.81013
RegenerationR6	1.714	2.861	0.06229	0.31329
RegenerationBL	1.973	2.861	0.25573	0.61303
RegenerationTP	4.479	2.861	0.00815	0.15217

Genes with expression patterns similar to MligTC455_41897

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41897	203	4.23	Mlig455_023419, Mlig455_023446	Neo: - Age: Down-Up-Down	SERPINA5, SERPINB9	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_023419 {REF} {Length: 1807} {TRANSSPLICED} {Pfam: Serpin (serine protease inhibitor) [PF00079.22, score=263.7]} {Human: ENSG00000170542, SERPINB9, serpin family B member 9, [Score=140, Expect=2e-37]; ENSG00000196136, SERPINA3, serpin family A member 3, [Score=139, Expect=1e-36]} {Mouse: ENSMUSG00000079049, Serpinb1c, serine (or cysteine) peptidase inhibitor, clade B, member 1c, [Score=153, Expect=3e-42]; ENSMUSG00000052180, Serpinb6c, serine (or cysteine) peptidase inhibitor, clade B, member 6c, [Score=152, Expect=8e-42]; ENSMUSG00000071177, Serpina1d, serine (or cysteine) peptidase inhibitor, clade A, member 1D, [Score=150, Expect=8e-41]; ENSMUSG00000069248, Serpinb6e, serine (or cysteine) peptidase inhibitor, clade B, member 6e, [Score=149, Expect=2e-40]; ENSMUSG00000045827, Serpinb9, serine (or cysteine) peptidase inhibitor, clade B, member 9, [Score=148, Expect=1e-40]; ENSMUSG00000072849, Serpina1e, serine (or cysteine) peptidase inhibitor, clade A, member 1E, [Score=147, Expect=1e-39]; ENSMUSG00000047889, Serpinb6d, serine (or cysteine) peptidase inhibitor, clade B, member 6d, [Score=147, Expect=4e-40]; ENSMUSG00000066366, Serpina1a, serine (or cysteine) peptidase inhibitor, clade A, member 1A, [Score=147, Expect=9e-40]; ENSMUSG00000079014, Serpina3i, serine (or cysteine) peptidase inhibitor, clade A, member 3I, [Score=146, Expect=2e-39]} {Dmel: FBgn0024294, Spn43Aa, Serpin 43Aa, [Score=136, Expect=4e-36]} {Celegans: WBGene00005647, srp-6, SeRPin; Serine or cysteine protease inhibitor, [Score=120, Expect=3e-30]} {Smed: dd_Smed_v6_3824_0_1, dd_Smed_v6_3824_0_1, [Score=151, Expect=6e-42]} {RNA1509_51092} {RNA1310_18900.2} {RNA815_5079.1} Mlig455_023446 {REF} {Length: 2181} {TRANSSPLICED} {Pfam: Serpin (serine protease inhibitor) [PF00079.22, score=96.9]} {Human: ENSG00000188488, SERPINA5, serpin family A member 5, [Score=67.4, Expect=2e-12]} {Mouse: ENSMUSG00000079014, Serpina3i, serine (or cysteine) peptidase inhibitor, clade A, member 3I, [Score=73.2, Expect=1e-14]; ENSMUSG00000071177, Serpina1d, serine (or cysteine) peptidase inhibitor, clade A, member 1D, [Score=72.8, Expect=1e-14]; ENSMUSG00000069248, Serpinb6e, serine (or cysteine) peptidase inhibitor, clade B, member 6e, [Score=71.6, Expect=3e-14]} {Dmel: FBgn0028983, Spn55B, Serpin 55B, [Score=72.0, Expect=1e-14]} {Celegans: WBGene00005642, srp-1, SeRPin; Serine or cysteine protease inhibitor, [Score=76.6, Expect=3e-16]} {Smed: dd_Smed_v6_3824_0_1, dd_Smed_v6_3824_0_1, [Score=75.9, Expect=5e-16]} {RNA1509_51092} {RNA1310_18900.2} {RNA815_5079.1}
2.	MligTC455_31938	131	2.74	Mlig455_041047	Neo: - Age: -		1.705	-	-	-	0.955	0.750	-	Mlig455_041047 {REF} {Length: 1376} {RNA1509_52877} {RNA1310_44065.2} {RNA815_31243}
3.	MligTC455_30491	31	0.65	Mlig455_008764	Neo: Int S/G2/M Age: Up-Down-Down Region-enriched R4: 5.721/0.00005	PPEF1	0.969	-	-	-	0.969	-	-	Mlig455_008764 {REF} {Length: 4579} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=97.3]; EF-hand domain pair [PF13499.8, score=70.7]; EF hand [PF00036.34, score=60.1]; EF-hand domain pair [PF13833.8, score=56.7]; EF-hand domain [PF13405.8, score=46.2]; EF hand [PF13202.8, score=40.6]; PPP5 TPR repeat region [PF08321.14, score=33.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=20.5]; IQ calmodulin-binding motif [PF00612.29, score=19.7]} {Human: ENSG00000086717, PPEF1, protein phosphatase with EF-hand domain 1, [RH, Score=563, Expect=0.0]} {Mouse: ENSMUSG00000062168, Ppef1, protein phosphatase with EF hand calcium-binding domain 1, [RH, Score=552, Expect=0.0]} {Dmel: FBgn0265959, rdgC, retinal degeneration C, [RH, Score=552, Expect=0.0]} {Celegans: WBGene00003969, pef-1, Serine/threonine-protein phosphatase with EF-hands pef-1, [RH, Score=624, Expect=0.0]} {Smed: dd_Smed_v6_11874_0_1, dd_Smed_v6_11874_0_1, [RH, Score=707, Expect=0.0]} {RNA1509_5920} {RNA1310_46136} {RNA815_2260.1}
4.	MligTC455_42457	63	1.31	Mlig455_020182	Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.680 Region-enriched R4: 3.390/0.03030		0.963	-	-	-	0.963	-	-	Mlig455_020182 {REF} {Length: 1595} {TRANSSPLICED} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=57.0, Expect=2e-10]} {RNA1509_59965} {RNA1310_27831} {RNA815_27307}
5.	MligTC455_07791	34	0.72	Mlig455_056058, Mlig455_061580, Mlig455_061592, Mlig455_061982	Neo: - Age: Up-Up-Down Region-enriched R3: 4.447/0.02029	ARHGAP11A	0.959	-	-	-	0.959	-	-	Mlig455_056058 {REF} {Length: 2481} {Pfam: RhoGAP domain [PF00620.29, score=67.6]} {Human: ENSG00000275568, ARHGAP11A, Rho GTPase activating protein 11A, [Score=71.6, Expect=5e-13]; ENSG00000198826, ARHGAP11A, Rho GTPase activating protein 11A, [Score=71.6, Expect=5e-13]; ENSG00000282168, ARHGAP11A, Rho GTPase activating protein 11A, [Score=70.9, Expect=6e-13]; ENSG00000285077, ARHGAP11B, Rho GTPase activating protein 11B, [Score=68.9, Expect=9e-13]; ENSG00000274734, ARHGAP11B, Rho GTPase activating protein 11B, [Score=68.9, Expect=9e-13]; ENSG00000284906, AC091057.6, Rho GTPase-activating protein 11B, [Score=68.9, Expect=9e-13]} {Mouse: ENSMUSG00000041219, Arhgap11a, Rho GTPase activating protein 11A, [Score=69.7, Expect=8e-13]} {Celegans: WBGene00015303, rga-6, Rho GTPase Activating protein, [Score=53.5, Expect=1e-07]} {RNA1310_51731} {RNA815_61027} Mlig455_061580 {REF} {Length: 1034} {Pfam: RhoGAP domain [PF00620.29, score=67.6]} {Human: ENSG00000275568, ARHGAP11A, Rho GTPase activating protein 11A, [Score=71.6, Expect=5e-13]; ENSG00000198826, ARHGAP11A, Rho GTPase activating protein 11A, [Score=71.6, Expect=5e-13]; ENSG00000282168, ARHGAP11A, Rho GTPase activating protein 11A, [Score=70.9, Expect=6e-13]; ENSG00000285077, ARHGAP11B, Rho GTPase activating protein 11B, [Score=68.9, Expect=9e-13]; ENSG00000274734, ARHGAP11B, Rho GTPase activating protein 11B, [Score=68.9, Expect=9e-13]; ENSG00000284906, AC091057.6, Rho GTPase-activating protein 11B, [Score=68.9, Expect=9e-13]} {Mouse: ENSMUSG00000041219, Arhgap11a, Rho GTPase activating protein 11A, [Score=69.7, Expect=8e-13]} {Celegans: WBGene00015303, rga-6, Rho GTPase Activating protein, [Score=53.5, Expect=1e-07]} {RNA1310_51731} Mlig455_061592 {REF} {Length: 1463} {Pfam: RhoGAP domain [PF00620.29, score=67.6]} {Human: ENSG00000275568, ARHGAP11A, Rho GTPase activating protein 11A, [Score=71.6, Expect=5e-13]; ENSG00000198826, ARHGAP11A, Rho GTPase activating protein 11A, [Score=71.6, Expect=5e-13]; ENSG00000282168, ARHGAP11A, Rho GTPase activating protein 11A, [Score=70.9, Expect=6e-13]; ENSG00000285077, ARHGAP11B, Rho GTPase activating protein 11B, [Score=68.9, Expect=9e-13]; ENSG00000274734, ARHGAP11B, Rho GTPase activating protein 11B, [Score=68.9, Expect=9e-13]; ENSG00000284906, AC091057.6, Rho GTPase-activating protein 11B, [Score=68.9, Expect=9e-13]} {Mouse: ENSMUSG00000041219, Arhgap11a, Rho GTPase activating protein 11A, [Score=69.7, Expect=8e-13]} {Celegans: WBGene00015303, rga-6, Rho GTPase Activating protein, [Score=53.5, Expect=1e-07]} {RNA1310_51731} {RNA815_11924} Mlig455_061982 {REF} {Length: 1037} {Pfam: RhoGAP domain [PF00620.29, score=68.0]} {Human: ENSG00000198826, ARHGAP11A, Rho GTPase activating protein 11A, [Score=77.4, Expect=7e-15]; ENSG00000275568, ARHGAP11A, Rho GTPase activating protein 11A, [Score=77.4, Expect=7e-15]; ENSG00000282168, ARHGAP11A, Rho GTPase activating protein 11A, [Score=76.3, Expect=1e-14]; ENSG00000285077, ARHGAP11B, Rho GTPase activating protein 11B, [Score=74.3, Expect=1e-14]; ENSG00000284906, AC091057.6, Rho GTPase-activating protein 11B, [Score=74.3, Expect=1e-14]; ENSG00000274734, ARHGAP11B, Rho GTPase activating protein 11B, [Score=74.3, Expect=1e-14]} {Mouse: ENSMUSG00000041219, Arhgap11a, Rho GTPase activating protein 11A, [Score=78.6, Expect=1e-15]} {Celegans: WBGene00015303, rga-6, Rho GTPase Activating protein, [Score=55.5, Expect=3e-08]} {RNA1310_51731}
6.	MligTC455_45088	126	2.62	Mlig455_068322	Neo: - Age: logFC(26M/2M)=-0.349	UCK1	0.953	-	-	-	-	-	0.953	Mlig455_068322 {REF} {Length: 2108} {TRANSSPLICED} {Pfam: Phosphoribulokinase / Uridine kinase family [PF00485.20, score=150.6]; AAA domain [PF13207.8, score=22.8]; AAA domain [PF13238.8, score=19.6]; Cytidylate kinase [PF02224.20, score=18.8]} {Human: ENSG00000130717, UCK1, uridine-cytidine kinase 1, [RH, Score=238, Expect=7e-78]; ENSG00000143179, UCK2, uridine-cytidine kinase 2, [RH, Score=234, Expect=1e-76]} {Mouse: ENSMUSG00000026558, Uck2, uridine-cytidine kinase 2, [RH, Score=235, Expect=2e-77]; ENSMUSG00000002550, Uck1, uridine-cytidine kinase 1, [RH, Score=233, Expect=5e-76]} {Dmel: FBgn0263398, CG6364, [RH, Score=239, Expect=1e-78]} {Celegans: WBGene00007089, B0001.4, Probable uridine-cytidine kinase, [RH, Score=190, Expect=4e-60]} {Smed: dd_Smed_v6_5820_0_1, dd_Smed_v6_5820_0_1, [RH, Score=194, Expect=2e-61]} {RNA1509_7359} {RNA1310_25359} {RNA815_9037}
7.	MligTC455_17447	82	1.71	Mlig455_021572	Neo: Germline Age: -		0.952	-	-	-	0.952	-	-	Mlig455_021572 {REF} {Length: 2764} {TRANSSPLICED} {RNA1509_16140} {RNA1310_33567} {RNA815_16351}
8.	MligTC455_35672	31	0.65	Mlig455_053915, Mlig455_060558	Neo: Germline Age: - Region-enriched R4: 3.950/0.00244		0.951	-	-	-	0.951	-	-	Mlig455_053915 {REF} {Length: 1453} {RNA1509_18097} {RNA1310_135722} {RNA815_35310} Mlig455_060558 {REF} {Length: 1361} {RNA1509_18097} {RNA1310_135722} {RNA815_35310}