TomoSeq data search

Data search

Results for MligTC455_41949

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41949

410

8.55

Mlig455_024801, Mlig455_024879

Neo: -

Age: Down-Up-Up

Region-enriched R3: 3.695/0.00130

MPEG1

Mlig455_024801 {REF} {Length: 2408} {Pfam: MAC/Perforin domain [PF01823.21, score=69.0]} {Human: ENSG00000197629, MPEG1, macrophage expressed 1, [Score=273, Expect=2e-81]} {Mouse: ENSMUSG00000046805, Mpeg1, macrophage expressed gene 1, [Score=270, Expect=3e-80]} {Smed: dd_Smed_v6_983_0_1, dd_Smed_v6_983_0_1, [Score=265, Expect=3e-79]} {RNA1509_34460} {RNA1310_1889.1} {RNA815_7377}

Mlig455_024879 {REF} {Length: 2649} {Pfam: MAC/Perforin domain [PF01823.21, score=76.9]} {Human: ENSG00000197629, MPEG1, macrophage expressed 1, [RH, Score=371, Expect=6e-117]} {Mouse: ENSMUSG00000046805, Mpeg1, macrophage expressed gene 1, [RH, Score=373, Expect=8e-118]} {Smed: dd_Smed_v6_983_0_1, dd_Smed_v6_983_0_1, [RH, Score=355, Expect=4e-112]} {RNA1509_34460} {RNA1310_1889.1, RNA1509_34460} {RNA1509_34460, RNA815_7377}

Cumulative graph for MligTC455_41949

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.217	3.711	0.99963	1.00000
RegionR2	-0.328	3.711	0.83409	1.00000
RegionR3	3.695	3.711	0.00002	0.00130
RegionR4	2.722	3.711	0.02591	0.12245
RegionR5	1.389	3.711	0.21307	0.51072
RegionR6	0.923	3.711	0.41289	0.98134
RegionR7	1.022	3.711	0.39762	1.00000
RegionR8	-5.206	3.711	0.99971	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.897	3.711	0.99994	1.00000
RegenerationR2	-0.6	3.711	0.45504	0.84994
RegenerationR3	-1.334	3.711	0.07464	0.45577
RegenerationR4	-0.317	3.711	0.69368	0.95094
RegenerationR5	-0.303	3.711	0.69167	0.94844
RegenerationR6	-0.57	3.711	0.49911	0.80532
RegenerationBL	-5.339	3.711	0.99979	1.00000
RegenerationTP	0.633	3.711	0.67628	1.00000

Genes with expression patterns similar to MligTC455_41949

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41949	410	8.55	Mlig455_024801, Mlig455_024879	Neo: - Age: Down-Up-Up Region-enriched R3: 3.695/0.00130	MPEG1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_024801 {REF} {Length: 2408} {Pfam: MAC/Perforin domain [PF01823.21, score=69.0]} {Human: ENSG00000197629, MPEG1, macrophage expressed 1, [Score=273, Expect=2e-81]} {Mouse: ENSMUSG00000046805, Mpeg1, macrophage expressed gene 1, [Score=270, Expect=3e-80]} {Smed: dd_Smed_v6_983_0_1, dd_Smed_v6_983_0_1, [Score=265, Expect=3e-79]} {RNA1509_34460} {RNA1310_1889.1} {RNA815_7377} Mlig455_024879 {REF} {Length: 2649} {Pfam: MAC/Perforin domain [PF01823.21, score=76.9]} {Human: ENSG00000197629, MPEG1, macrophage expressed 1, [RH, Score=371, Expect=6e-117]} {Mouse: ENSMUSG00000046805, Mpeg1, macrophage expressed gene 1, [RH, Score=373, Expect=8e-118]} {Smed: dd_Smed_v6_983_0_1, dd_Smed_v6_983_0_1, [RH, Score=355, Expect=4e-112]} {RNA1509_34460} {RNA1310_1889.1, RNA1509_34460} {RNA1509_34460, RNA815_7377}
2.	MligTC455_41071	595	12.4	Mlig455_050924	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.124 Region-specific R3: 6.335 Region-enriched R3: 6.230/0.00000 Region-enriched R4: 3.678/0.00128		5.045	0.884	0.713	0.961	0.846	0.790	0.851	Mlig455_050924 {REF} {Length: 782} {RNA1509_24397, RNA1509_40835} {RNA1310_44283.1, RNA1509_24397, RNA1509_40835} {RNA1509_24397, RNA1509_40835, RNA815_21735}
3.	MligTC455_41950	115	2.4	Mlig455_068444	Neo: - Age: Down-Down-Up	MPEG1	3.461	-	0.852	0.968	0.716	0.925	-	Mlig455_068444 {REF} {Length: 2615} {Pfam: MAC/Perforin domain [PF01823.21, score=76.5]} {Human: ENSG00000197629, MPEG1, macrophage expressed 1, [Score=337, Expect=6e-105]} {Mouse: ENSMUSG00000046805, Mpeg1, macrophage expressed gene 1, [Score=336, Expect=1e-104]} {Smed: dd_Smed_v6_983_0_1, dd_Smed_v6_983_0_1, [Score=331, Expect=2e-103]} {RNA1509_34460} {RNA1310_1889.2} {RNA815_7377}
4.	MligTC455_33508	98	2.04	Mlig455_018640, Mlig455_018828	Neo: - Age: logFC(26M/2M)=0.731 Region-enriched R3: 3.840/0.00727 Region-enriched R4: 3.777/0.00641	ANK2	1.825	-	-	0.960	-	0.865	-	Mlig455_018640 {REF} {Length: 3774} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=242.3]; Ankyrin repeats (many copies) [PF13637.8, score=160.9]; Ankyrin repeat [PF13606.8, score=145.4]; Ankyrin repeat [PF00023.32, score=141.1]; Ankyrin repeats (many copies) [PF13857.8, score=119.3]; Mab-21 protein [PF03281.16, score=33.7]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=196, Expect=4e-50]; ENSG00000151150, ANK3, ankyrin 3, [Score=193, Expect=5e-49]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=191, Expect=1e-48]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=190, Expect=3e-48]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=186, Expect=6e-47]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=177, Expect=1e-44]} {Smed: dd_Smed_v6_3523_0_1, dd_Smed_v6_3523_0_1, [Score=181, Expect=4e-46]} {RNA1509_25033} {RNA1310_1935.1} {RNA815_12268} Mlig455_018828 {REF} {Length: 3908} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=242.4]; Ankyrin repeats (many copies) [PF13637.8, score=160.9]; Ankyrin repeat [PF13606.8, score=146.0]; Ankyrin repeat [PF00023.32, score=141.3]; Ankyrin repeats (many copies) [PF13857.8, score=119.2]; Mab-21 protein [PF03281.16, score=33.7]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=195, Expect=7e-50]; ENSG00000151150, ANK3, ankyrin 3, [Score=193, Expect=3e-49]; ENSG00000029534, ANK1, ankyrin 1, [Score=187, Expect=4e-47]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=190, Expect=3e-48]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=190, Expect=3e-48]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=184, Expect=1e-46]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=177, Expect=2e-44]} {Smed: dd_Smed_v6_3523_0_1, dd_Smed_v6_3523_0_1, [Score=183, Expect=1e-46]} {RNA1509_25033, RNA1509_4836} {RNA1310_1935.1, RNA1509_25033, RNA1509_4836} {RNA1509_25033, RNA1509_4836, RNA815_12268}
5.	MligTC455_27441	61	1.28	Mlig455_054526, Mlig455_055380, Mlig455_055445	Neo: - Age: -	LRFN4	0.954	-	-	0.954	-	-	-	Mlig455_054526 {REF} {Length: 2836} {Pfam: Leucine rich repeat [PF13855.8, score=58.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=42.2]; Transposase (partial DDE domain) [PF01359.20, score=30.0]; Leucine-rich repeat [PF14580.8, score=25.7]; Immunoglobulin domain [PF13927.8, score=22.0]} {Human: ENSG00000173621, LRFN4, leucine rich repeat and fibronectin type III domain containing 4, [Score=76.6, Expect=3e-14]} {Mouse: ENSMUSG00000023176, Cpn2, carboxypeptidase N, polypeptide 2, [Score=72.8, Expect=7e-13]; ENSMUSG00000045045, Lrfn4, leucine rich repeat and fibronectin type III domain containing 4, [Score=70.1, Expect=4e-12]} {Dmel: FBgn0243486, rdo, reduced ocelli, [Score=51.6, Expect=2e-06]} {Smed: dd_Smed_v6_10393_0_1, dd_Smed_v6_10393_0_1, [RH, Score=101, Expect=2e-22]} {RNA1310_13170.1} {RNA815_38727} Mlig455_055380 {REF} {Length: 8142} {Pfam: Leucine rich repeat [PF13855.8, score=57.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=42.0]; Transposase (partial DDE domain) [PF01359.20, score=40.1]; Leucine-rich repeat [PF14580.8, score=25.5]; Immunoglobulin domain [PF13927.8, score=22.5]} {Human: ENSG00000173621, LRFN4, leucine rich repeat and fibronectin type III domain containing 4, [Score=72.4, Expect=9e-13]} {Mouse: ENSMUSG00000023176, Cpn2, carboxypeptidase N, polypeptide 2, [Score=66.6, Expect=5e-11]; ENSMUSG00000045045, Lrfn4, leucine rich repeat and fibronectin type III domain containing 4, [Score=65.9, Expect=1e-10]} {Dmel: FBgn0036494, Toll-6, [Score=53.5, Expect=7e-07]} {Smed: dd_Smed_v6_10393_0_1, dd_Smed_v6_10393_0_1, [RH, Score=101, Expect=3e-22]} {RNA1509_31244, RNA1509_32043} {RNA1310_13170.1, RNA1509_32043} {RNA1509_32043, RNA815_38727} Mlig455_055445 {REF} {Length: 1796} {RNA1310_102243}
6.	MligTC455_29430	55	1.14	Mlig455_069216	Neo: Int S/G2/M Age: -		0.951	-	-	0.951	-	-	-	Mlig455_069216 {REF} {Length: 2946} {RNA1310_49307} {RNA815_29887}

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