Data search
Results for MligTC455_41978
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41978 | 2203 | 45.89 | Mlig455_058463 | Neo: Irradiation Age: Down-Up-Up |
SRSF7 | Mlig455_058463 {REF} {Length: 1119} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=59.9]; RNA recognition motif [PF16367.7, score=24.7]; Zinc knuckle [PF00098.25, score=22.4]} {Human: ENSG00000115875, SRSF7, serine and arginine rich splicing factor 7, [RH, Score=135, Expect=4e-41]} {Mouse: ENSMUSG00000024097, Srsf7, serine/arginine-rich splicing factor 7, [RH, Score=135, Expect=3e-41]} {Dmel: FBgn0028554, x16, x16 splicing factor, [RH, Score=111, Expect=2e-30]} {Celegans: WBGene00004703, rsp-6, Probable splicing factor, arginine/serine-rich 6, [RH, Score=105, Expect=5e-29]} {Smed: dd_Smed_v6_2424_0_1, dd_Smed_v6_2424_0_1, [Score=122, Expect=3e-36]} {RNA1509_49399} {RNA1310_28816} {RNA815_14727} |
Cumulative graph for MligTC455_41978
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.651 | 5.609 | 0.36615 | 1.00000 | |
| RegionR2 | -0.055 | 5.609 | 0.87897 | 1.00000 | |
| RegionR3 | -0.081 | 5.609 | 0.78737 | 1.00000 | |
| RegionR4 | 0.535 | 5.609 | 0.10347 | 0.31442 | |
| RegionR5 | 0.763 | 5.609 | 0.00376 | 0.02801 | |
| RegionR6 | 0.241 | 5.609 | 0.41149 | 0.98069 | |
| RegionR7 | -0.232 | 5.609 | 0.52071 | 1.00000 | |
| RegionR8 | -0.521 | 5.609 | 0.25342 | 0.87242 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.66 | 5.609 | 0.47593 | 1.00000 | |
| RegenerationR2 | -0.491 | 5.609 | 0.14875 | 0.58180 | |
| RegenerationR3 | 0.047 | 5.609 | 0.89556 | 1.00000 | |
| RegenerationR4 | -0.067 | 5.609 | 0.84786 | 1.00000 | |
| RegenerationR5 | 0.268 | 5.609 | 0.40599 | 0.80317 | |
| RegenerationR6 | 0.759 | 5.609 | 0.02789 | 0.20878 | |
| RegenerationBL | 0.992 | 5.609 | 0.00442 | 0.06065 | |
| RegenerationTP | 0.533 | 5.609 | 0.19333 | 0.63192 |
Genes with expression patterns similar to MligTC455_41978
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41978 | 2203 | 45.89 | Mlig455_058463 | Neo: Irradiation Age: Down-Up-Up |
SRSF7 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_058463 {REF} {Length: 1119} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=59.9]; RNA recognition motif [PF16367.7, score=24.7]; Zinc knuckle [PF00098.25, score=22.4]} {Human: ENSG00000115875, SRSF7, serine and arginine rich splicing factor 7, [RH, Score=135, Expect=4e-41]} {Mouse: ENSMUSG00000024097, Srsf7, serine/arginine-rich splicing factor 7, [RH, Score=135, Expect=3e-41]} {Dmel: FBgn0028554, x16, x16 splicing factor, [RH, Score=111, Expect=2e-30]} {Celegans: WBGene00004703, rsp-6, Probable splicing factor, arginine/serine-rich 6, [RH, Score=105, Expect=5e-29]} {Smed: dd_Smed_v6_2424_0_1, dd_Smed_v6_2424_0_1, [Score=122, Expect=3e-36]} {RNA1509_49399} {RNA1310_28816} {RNA815_14727} |
| 2. | MligTC455_41977 | 2190 | 45.62 | Mlig455_000206 | Neo: Irradiation Age: Down-Up-Up |
SRSF7 | 5.997 | 1.000 | 0.999 | 0.999 | 1.000 | 0.999 | 1.000 | Mlig455_000206 {REF} {Length: 1112} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=59.9]; RNA recognition motif [PF16367.7, score=24.7]; Zinc knuckle [PF00098.25, score=22.4]} {Human: ENSG00000115875, SRSF7, serine and arginine rich splicing factor 7, [RH, Score=135, Expect=6e-41]} {Mouse: ENSMUSG00000024097, Srsf7, serine/arginine-rich splicing factor 7, [Score=136, Expect=4e-40]} {Dmel: FBgn0028554, x16, x16 splicing factor, [RH, Score=111, Expect=2e-30]} {Celegans: WBGene00004703, rsp-6, Probable splicing factor, arginine/serine-rich 6, [RH, Score=105, Expect=6e-29]} {Smed: dd_Smed_v6_2424_0_2, dd_Smed_v6_2424_0_2, [Score=122, Expect=4e-36]} {RNA1509_15751, RNA1509_49399} {RNA1310_28816, RNA1509_15751, RNA1509_49399} {RNA1509_15751, RNA1509_49399, RNA815_14727} |
| 3. | MligTC455_23918 | 278 | 5.79 | Mlig455_030499 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_030499 {REF} {Length: 1733} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF13649.8, score=49.1]; Methyltransferase domain [PF08241.14, score=46.1]; Methyltransferase domain [PF08242.14, score=29.7]; Methyltransferase domain [PF13847.8, score=28.6]; Methyltransferase domain [PF13489.8, score=24.1]} {RNA1509_46318} {RNA1310_38338} {RNA815_45705} |
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