TomoSeq data search

Data search

Results for MligTC455_41999

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41999

2030

42.28

Mlig455_020122, Mlig455_022316

Neo: -

Age: Down-Up-Down

ZMIZ1

Mlig455_020122 {REF} {Length: 2728} {TRANSSPLICED} {Pfam: MIZ/SP-RING zinc finger [PF02891.22, score=75.9]} {Human: ENSG00000108175, ZMIZ1, zinc finger MIZ-type containing 1, [Score=242, Expect=2e-69]; ENSG00000122515, ZMIZ2, zinc finger MIZ-type containing 2, [Score=240, Expect=3e-69]} {Mouse: ENSMUSG00000007817, Zmiz1, zinc finger, MIZ-type containing 1, [Score=241, Expect=2e-69]; ENSMUSG00000041164, Zmiz2, zinc finger, MIZ-type containing 2, [Score=238, Expect=5e-69]} {Dmel: FBgn0026160, tna, tonalli, [Score=220, Expect=5e-62]} {Celegans: WBGene00001574, gei-17, E3 SUMO-protein ligase gei-17, [Score=65.9, Expect=4e-11]} {Smed: dd_Smed_v6_10016_0_1, dd_Smed_v6_10016_0_1, [Score=114, Expect=9e-27]} {RNA1509_21653, RNA1509_6742} {RNA1310_7051, RNA1509_21653, RNA1509_6742} {RNA1509_21653, RNA1509_6742, RNA815_2879.1}

Mlig455_022316 {REF} {Length: 3564} {Pfam: MIZ/SP-RING zinc finger [PF02891.22, score=75.9]} {Human: ENSG00000108175, ZMIZ1, zinc finger MIZ-type containing 1, [Score=241, Expect=3e-69]; ENSG00000122515, ZMIZ2, zinc finger MIZ-type containing 2, [Score=239, Expect=4e-69]} {Mouse: ENSMUSG00000007817, Zmiz1, zinc finger, MIZ-type containing 1, [Score=241, Expect=3e-69]; ENSMUSG00000041164, Zmiz2, zinc finger, MIZ-type containing 2, [Score=239, Expect=2e-69]} {Dmel: FBgn0026160, tna, tonalli, [Score=219, Expect=8e-62]} {Celegans: WBGene00001574, gei-17, E3 SUMO-protein ligase gei-17, [Score=65.9, Expect=3e-11]} {Smed: dd_Smed_v6_10016_0_1, dd_Smed_v6_10016_0_1, [Score=112, Expect=4e-26]} {RNA1509_6742} {RNA1310_7051} {RNA815_2879.1}

Cumulative graph for MligTC455_41999

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.229	5.556	0.75457	1.00000
RegionR2	-0.256	5.556	0.55019	0.91565
RegionR3	-0.459	5.556	0.21399	0.75526
RegionR4	-0.029	5.556	0.94689	1.00000
RegionR5	0.297	5.556	0.38245	0.73730
RegionR6	0.651	5.556	0.05786	0.45073
RegionR7	0.063	5.556	0.87783	1.00000
RegionR8	-0.037	5.556	0.94149	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-8.972	5.556	0.00272	0.26849
RegenerationR2	0.342	5.556	0.41213	0.82175
RegenerationR3	0.06	5.556	0.89333	1.00000
RegenerationR4	-0.183	5.556	0.69025	0.94949
RegenerationR5	0.264	5.556	0.53037	0.87515
RegenerationR6	-0.101	5.556	0.81465	0.98468
RegenerationBL	0.28	5.556	0.49763	0.86273
RegenerationTP	0.546	5.556	0.23005	0.67518

Genes with expression patterns similar to MligTC455_41999

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41999	2030	42.28	Mlig455_020122, Mlig455_022316	Neo: - Age: Down-Up-Down	ZMIZ1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_020122 {REF} {Length: 2728} {TRANSSPLICED} {Pfam: MIZ/SP-RING zinc finger [PF02891.22, score=75.9]} {Human: ENSG00000108175, ZMIZ1, zinc finger MIZ-type containing 1, [Score=242, Expect=2e-69]; ENSG00000122515, ZMIZ2, zinc finger MIZ-type containing 2, [Score=240, Expect=3e-69]} {Mouse: ENSMUSG00000007817, Zmiz1, zinc finger, MIZ-type containing 1, [Score=241, Expect=2e-69]; ENSMUSG00000041164, Zmiz2, zinc finger, MIZ-type containing 2, [Score=238, Expect=5e-69]} {Dmel: FBgn0026160, tna, tonalli, [Score=220, Expect=5e-62]} {Celegans: WBGene00001574, gei-17, E3 SUMO-protein ligase gei-17, [Score=65.9, Expect=4e-11]} {Smed: dd_Smed_v6_10016_0_1, dd_Smed_v6_10016_0_1, [Score=114, Expect=9e-27]} {RNA1509_21653, RNA1509_6742} {RNA1310_7051, RNA1509_21653, RNA1509_6742} {RNA1509_21653, RNA1509_6742, RNA815_2879.1} Mlig455_022316 {REF} {Length: 3564} {Pfam: MIZ/SP-RING zinc finger [PF02891.22, score=75.9]} {Human: ENSG00000108175, ZMIZ1, zinc finger MIZ-type containing 1, [Score=241, Expect=3e-69]; ENSG00000122515, ZMIZ2, zinc finger MIZ-type containing 2, [Score=239, Expect=4e-69]} {Mouse: ENSMUSG00000007817, Zmiz1, zinc finger, MIZ-type containing 1, [Score=241, Expect=3e-69]; ENSMUSG00000041164, Zmiz2, zinc finger, MIZ-type containing 2, [Score=239, Expect=2e-69]} {Dmel: FBgn0026160, tna, tonalli, [Score=219, Expect=8e-62]} {Celegans: WBGene00001574, gei-17, E3 SUMO-protein ligase gei-17, [Score=65.9, Expect=3e-11]} {Smed: dd_Smed_v6_10016_0_1, dd_Smed_v6_10016_0_1, [Score=112, Expect=4e-26]} {RNA1509_6742} {RNA1310_7051} {RNA815_2879.1}
2.	MligTC455_21671	433	9.02	Mlig455_034206	Neo: Irradiation Age: - Region-enriched R5: 1.128/0.02068	PRR9	2.626	-	-	0.912	-	0.950	0.764	Mlig455_034206 {REF} {Length: 2697} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=50.1, Expect=3e-07]} {Celegans: WBGene00018026, F35A5.4, [Score=63.5, Expect=6e-11]} {RNA1509_59164} {RNA1310_45940} {RNA815_9330.1}
3.	MligTC455_23622	626	13.03	Mlig455_069362	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.469 Region-enriched R4: 1.674/0.00636	RPS6KB1	1.78	-	-	-	-	0.825	0.955	Mlig455_069362 {REF} {Length: 5681} {Pfam: Protein kinase domain [PF00069.27, score=223.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=116.0]; Protein kinase C terminal domain [PF00433.26, score=40.0]; Kinase-like [PF14531.8, score=20.6]; Fungal protein kinase [PF17667.3, score=19.6]; ABC1 atypical kinase-like domain [PF03109.18, score=18.3]} {Human: ENSG00000108443, RPS6KB1, ribosomal protein S6 kinase B1, [RH, Score=474, Expect=2e-164]; ENSG00000175634, RPS6KB2, ribosomal protein S6 kinase B2, [RH, Score=471, Expect=1e-162]} {Mouse: ENSMUSG00000020516, Rps6kb1, ribosomal protein S6 kinase, polypeptide 1, [RH, Score=474, Expect=2e-163]; ENSMUSG00000097721, Rps6kb2, ribosomal protein S6 kinase, polypeptide 2, [RH, Score=461, Expect=5e-159]; ENSMUSG00000024830, Rps6kb2, ribosomal protein S6 kinase, polypeptide 2, [RH, Score=461, Expect=5e-159]} {Dmel: FBgn0283472, S6k, Ribosomal protein S6 kinase, [RH, Score=454, Expect=6e-156]} {Celegans: WBGene00012929, rsks-1, Ribosomal protein S6 kinase beta, [Score=446, Expect=3e-152]} {Smed: dd_Smed_v6_11674_0_1, dd_Smed_v6_11674_0_1, [RH, Score=424, Expect=5e-144]} {RNA1509_13825} {RNA1310_8029, RNA1509_13825} {RNA1509_13825, RNA815_1183}
4.	MligTC455_23623	1278	26.62	Mlig455_041396, Mlig455_069381	Neo: - Age: - Region-enriched R4: 1.684/0.00247	RPS6KB1	1.774	-	-	-	-	0.820	0.954	Mlig455_041396 {REF} {Length: 5405} {Pfam: Protein kinase domain [PF00069.27, score=223.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=116.0]; Protein kinase C terminal domain [PF00433.26, score=40.9]; Kinase-like [PF14531.8, score=20.6]; Fungal protein kinase [PF17667.3, score=19.6]; ABC1 atypical kinase-like domain [PF03109.18, score=18.3]} {Human: ENSG00000108443, RPS6KB1, ribosomal protein S6 kinase B1, [RH, Score=478, Expect=3e-165]; ENSG00000175634, RPS6KB2, ribosomal protein S6 kinase B2, [RH, Score=474, Expect=7e-164]} {Mouse: ENSMUSG00000020516, Rps6kb1, ribosomal protein S6 kinase, polypeptide 1, [RH, Score=478, Expect=1e-164]; ENSMUSG00000024830, Rps6kb2, ribosomal protein S6 kinase, polypeptide 2, [RH, Score=464, Expect=3e-160]; ENSMUSG00000097721, Rps6kb2, ribosomal protein S6 kinase, polypeptide 2, [RH, Score=464, Expect=3e-160]} {Dmel: FBgn0283472, S6k, Ribosomal protein S6 kinase, [RH, Score=456, Expect=5e-157]} {Celegans: WBGene00012929, rsks-1, Ribosomal protein S6 kinase beta, [RH, Score=448, Expect=5e-153]} {Smed: dd_Smed_v6_11674_0_1, dd_Smed_v6_11674_0_1, [RH, Score=421, Expect=1e-142]} {RNA1509_22872, RNA1509_40421} {RNA1310_8029, RNA1509_22872, RNA1509_40421} {RNA1509_22872, RNA1509_40421, RNA815_1183} Mlig455_069381 {REF} {Length: 4873} {Pfam: Protein kinase domain [PF00069.27, score=223.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=116.0]; Protein kinase C terminal domain [PF00433.26, score=39.8]; Kinase-like [PF14531.8, score=20.6]; Fungal protein kinase [PF17667.3, score=19.6]; ABC1 atypical kinase-like domain [PF03109.18, score=18.3]} {Human: ENSG00000108443, RPS6KB1, ribosomal protein S6 kinase B1, [RH, Score=475, Expect=3e-164]; ENSG00000175634, RPS6KB2, ribosomal protein S6 kinase B2, [RH, Score=471, Expect=1e-162]} {Mouse: ENSMUSG00000020516, Rps6kb1, ribosomal protein S6 kinase, polypeptide 1, [RH, Score=474, Expect=2e-163]; ENSMUSG00000024830, Rps6kb2, ribosomal protein S6 kinase, polypeptide 2, [RH, Score=461, Expect=7e-159]; ENSMUSG00000097721, Rps6kb2, ribosomal protein S6 kinase, polypeptide 2, [RH, Score=461, Expect=7e-159]} {Dmel: FBgn0283472, S6k, Ribosomal protein S6 kinase, [RH, Score=452, Expect=1e-155]} {Celegans: WBGene00012929, rsks-1, Ribosomal protein S6 kinase beta, [Score=445, Expect=5e-152]} {Smed: dd_Smed_v6_11674_0_1, dd_Smed_v6_11674_0_1, [RH, Score=423, Expect=1e-143]} {RNA1509_20605, RNA1509_40421} {RNA1310_8029, RNA1509_20605} {RNA1509_20605, RNA815_1183}
5.	MligTC455_42223	1053	21.94	Mlig455_000147, Mlig455_067730	Neo: - Age: -	LDB2	0.96	-	-	-	-	-	0.960	Mlig455_000147 {REF} {Length: 5213} {Pfam: LIM-domain binding protein [PF01803.18, score=86.8]; LIM interaction domain (LID) [PF17916.3, score=44.9]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [Score=196, Expect=4e-57]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [Score=193, Expect=4e-56]; ENSMUSG00000025223, Ldb1, LIM domain binding 1, [Score=189, Expect=4e-54]} {Dmel: FBgn0013764, Chi, Chip, [Score=177, Expect=2e-48]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [Score=87.0, Expect=8e-18]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=195, Expect=4e-55]} {RNA1509_23423} {RNA1310_8456, RNA1509_23423} {RNA1509_23423, RNA815_4815} Mlig455_067730 {REF} {Length: 5302} {TRANSSPLICED} {Pfam: LIM-domain binding protein [PF01803.18, score=86.6]; LIM interaction domain (LID) [PF17916.3, score=44.9]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [Score=197, Expect=1e-57]; ENSG00000198728, LDB1, LIM domain binding 1, [Score=191, Expect=9e-55]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [Score=195, Expect=7e-57]; ENSMUSG00000025223, Ldb1, LIM domain binding 1, [Score=191, Expect=8e-55]} {Dmel: FBgn0013764, Chi, Chip, [Score=176, Expect=8e-48]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [Score=90.5, Expect=5e-19]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=197, Expect=9e-56]} {RNA1509_23423} {RNA1310_8456} {RNA815_4815}
6.	MligTC455_48843	660	13.74	Mlig455_044615	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_044615 {REF} {Length: 2002} {TRANSSPLICED} {RNA1509_29862} {RNA1310_13775, RNA1509_29862} {RNA1509_29862, RNA815_10034}
7.	MligTC455_08176	295	6.14	Mlig455_003066	Neo: - Age: Down-Up-Down	ANK3	0.957	-	-	-	-	0.957	-	Mlig455_003066 {REF} {Length: 1910} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=77.5]; Ankyrin repeat [PF00023.32, score=60.5]; Ankyrin repeats (many copies) [PF13637.8, score=47.3]; Ankyrin repeats (many copies) [PF13857.8, score=44.4]; Ankyrin repeat [PF13606.8, score=43.5]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=57.4, Expect=5e-08]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=53.1, Expect=7e-07]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=53.1, Expect=6e-07]; ENSMUSG00000047117, Ankdd1b, ankyrin repeat and death domain containing 1B, [Score=51.6, Expect=1e-06]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=50.8, Expect=3e-06]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=58.9, Expect=6e-09]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=53.5, Expect=3e-07]} {Smed: dd_Smed_v6_10835_0_2, dd_Smed_v6_10835_0_2, [Score=51.2, Expect=1e-06]} {RNA1509_10786} {RNA1310_15894, RNA1509_10786} {RNA1509_10786, RNA815_6009}
8.	MligTC455_52713	785	16.35	Mlig455_029953, Mlig455_067210	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_029953 {REF} {Length: 4943} {TRANSSPLICED} {RNA1509_20853} {RNA1310_4356.2} {RNA815_2677} Mlig455_067210 {REF} {Length: 4204} {TRANSSPLICED} {RNA1509_20853} {RNA1310_4356.1} {RNA815_2677}
9.	MligTC455_48893	851	17.72	Mlig455_008345	Neo: - Age: Down-Up-Down Regeneration-downregulated BL: -3.366 Regeneration-depleted BL: -3.366		0.95	-	-	0.950	-	-	-	Mlig455_008345 {REF} {Length: 572} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_15367} {RNA1310_27333.1, RNA1509_15367} {RNA1509_15367, RNA815_31156}

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