TomoSeq data search

Data search

Results for MligTC455_42022

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_42022	411	8.57	Mlig455_048218	Neo: - Age: logFC(26M/2M)=-0.289 Region-enriched R8: 1.908/0.02845		Mlig455_048218 {REF} {Length: 1933} {RNA1509_19793} {RNA1310_30039, RNA1509_19793} {RNA1509_19793, RNA815_11343.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_42022

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.956	3.237	0.38322	1.00000
RegionR2	0.378	3.237	0.53731	0.90663
RegionR3	0.603	3.237	0.16610	0.68849
RegionR4	-1.937	3.237	0.00095	0.00999
RegionR5	-1.403	3.237	0.00202	0.01763
RegionR6	0.294	3.237	0.51614	1.00000
RegionR7	1.113	3.237	0.02847	0.31924
RegionR8	1.908	3.237	0.00051	0.02845

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.36	3.237	0.48041	1.00000
RegenerationR2	-0.894	3.237	0.16671	0.60460
RegenerationR3	-0.534	3.237	0.39686	0.80088
RegenerationR4	0.616	3.237	0.33840	0.77056
RegenerationR5	0.395	3.237	0.50046	0.85863
RegenerationR6	-0.091	3.237	0.90004	1.00000
RegenerationBL	-1.12	3.237	0.16355	0.48471
RegenerationTP	-0.421	3.237	0.55473	0.93619

Genes with expression patterns similar to MligTC455_42022

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42022	411	8.57	Mlig455_048218	Neo: - Age: logFC(26M/2M)=-0.289 Region-enriched R8: 1.908/0.02845		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_048218 {REF} {Length: 1933} {RNA1509_19793} {RNA1310_30039, RNA1509_19793} {RNA1509_19793, RNA815_11343.1}
2.	MligTC455_43439	189	3.93	Mlig455_055229, Mlig455_055327	Neo: - Age: -	RNF170	0.957	-	-	0.957	-	-	-	Mlig455_055229 {REF} {Length: 1491} {Pfam: Protein of unknown function (DUF1232) [PF06803.14, score=36.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=32.3]; Ring finger domain [PF13639.8, score=31.5]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=30.5]; zinc-RING finger domain [PF14634.8, score=27.4]; RING-type zinc-finger [PF13445.8, score=26.0]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=24.9]; zinc finger of C3HC4-type, RING [PF15227.8, score=22.2]; Baculovirus immediate-early protein (IE-0) [PF05290.13, score=18.8]} {Human: ENSG00000120925, RNF170, ring finger protein 170, [RH, Score=135, Expect=7e-39]} {Mouse: ENSMUSG00000013878, Rnf170, ring finger protein 170, [RH, Score=135, Expect=4e-39]} {Smed: dd_Smed_v6_7918_0_1, dd_Smed_v6_7918_0_1, [RH, Score=126, Expect=5e-36]} {RNA1509_22235} {RNA1310_9312.1} {RNA815_10897} Mlig455_055327 {REF} {Length: 1662} {Pfam: Protein of unknown function (DUF1232) [PF06803.14, score=36.0]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=32.1]; Ring finger domain [PF13639.8, score=30.6]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=30.4]; zinc-RING finger domain [PF14634.8, score=27.3]; RING-type zinc-finger [PF13445.8, score=25.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=24.8]; zinc finger of C3HC4-type, RING [PF15227.8, score=21.7]} {Human: ENSG00000120925, RNF170, ring finger protein 170, [RH, Score=137, Expect=5e-39]} {Mouse: ENSMUSG00000013878, Rnf170, ring finger protein 170, [RH, Score=137, Expect=4e-39]} {Smed: dd_Smed_v6_7918_0_1, dd_Smed_v6_7918_0_1, [RH, Score=127, Expect=5e-36]} {RNA1509_22235} {RNA1310_9312.1} {RNA815_10897}
3.	MligTC455_18049	3659	76.23	Mlig455_022507, Mlig455_055035	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_022507 {REF} {Length: 1498} {Pfam: PLAC8 family [PF04749.19, score=73.4]} {Smed: dd_Smed_v6_743_0_1, dd_Smed_v6_743_0_1, [Score=111, Expect=4e-33]} {RNA1509_17309, RNA1509_44969, RNA1509_59075} {RNA1310_55602, RNA1509_17309, RNA1509_44969, RNA1509_59075} {RNA1509_17309, RNA1509_44969, RNA1509_59075, RNA815_30798} Mlig455_055035 {REF} {Length: 943} {Pfam: PLAC8 family [PF04749.19, score=73.5]; Uncharacterized protein conserved in archaea (DUF2180) [PF09947.11, score=18.7]} {Smed: dd_Smed_v6_743_0_1, dd_Smed_v6_743_0_1, [Score=111, Expect=4e-33]} {RNA1509_44969} {RNA1310_55602} {RNA815_30798}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_42022

411

8.57

Mlig455_048218

Neo: -

Age: logFC(26M/2M)=-0.289

Region-enriched R8: 1.908/0.02845

1.000

Mlig455_048218 {REF} {Length: 1933} {RNA1509_19793} {RNA1310_30039, RNA1509_19793} {RNA1509_19793, RNA815_11343.1}

MligTC455_43439

189

3.93

Mlig455_055229, Mlig455_055327

Neo: -

Age: -

RNF170

0.957

Mlig455_055229 {REF} {Length: 1491} {Pfam: Protein of unknown function (DUF1232) [PF06803.14, score=36.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=32.3]; Ring finger domain [PF13639.8, score=31.5]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=30.5]; zinc-RING finger domain [PF14634.8, score=27.4]; RING-type zinc-finger [PF13445.8, score=26.0]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=24.9]; zinc finger of C3HC4-type, RING [PF15227.8, score=22.2]; Baculovirus immediate-early protein (IE-0) [PF05290.13, score=18.8]} {Human: ENSG00000120925, RNF170, ring finger protein 170, [RH, Score=135, Expect=7e-39]} {Mouse: ENSMUSG00000013878, Rnf170, ring finger protein 170, [RH, Score=135, Expect=4e-39]} {Smed: dd_Smed_v6_7918_0_1, dd_Smed_v6_7918_0_1, [RH, Score=126, Expect=5e-36]} {RNA1509_22235} {RNA1310_9312.1} {RNA815_10897}

Mlig455_055327 {REF} {Length: 1662} {Pfam: Protein of unknown function (DUF1232) [PF06803.14, score=36.0]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=32.1]; Ring finger domain [PF13639.8, score=30.6]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=30.4]; zinc-RING finger domain [PF14634.8, score=27.3]; RING-type zinc-finger [PF13445.8, score=25.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=24.8]; zinc finger of C3HC4-type, RING [PF15227.8, score=21.7]} {Human: ENSG00000120925, RNF170, ring finger protein 170, [RH, Score=137, Expect=5e-39]} {Mouse: ENSMUSG00000013878, Rnf170, ring finger protein 170, [RH, Score=137, Expect=4e-39]} {Smed: dd_Smed_v6_7918_0_1, dd_Smed_v6_7918_0_1, [RH, Score=127, Expect=5e-36]} {RNA1509_22235} {RNA1310_9312.1} {RNA815_10897}

MligTC455_18049

3659

76.23

Mlig455_022507, Mlig455_055035

Neo: -

Age: -

0.954

Mlig455_022507 {REF} {Length: 1498} {Pfam: PLAC8 family [PF04749.19, score=73.4]} {Smed: dd_Smed_v6_743_0_1, dd_Smed_v6_743_0_1, [Score=111, Expect=4e-33]} {RNA1509_17309, RNA1509_44969, RNA1509_59075} {RNA1310_55602, RNA1509_17309, RNA1509_44969, RNA1509_59075} {RNA1509_17309, RNA1509_44969, RNA1509_59075, RNA815_30798}

Mlig455_055035 {REF} {Length: 943} {Pfam: PLAC8 family [PF04749.19, score=73.5]; Uncharacterized protein conserved in archaea (DUF2180) [PF09947.11, score=18.7]} {Smed: dd_Smed_v6_743_0_1, dd_Smed_v6_743_0_1, [Score=111, Expect=4e-33]} {RNA1509_44969} {RNA1310_55602} {RNA815_30798}