TomoSeq data search

Data search

Results for MligTC455_42055

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42055

288

6.00

Mlig455_001786

Neo: -

Age: Down-Down-Up

SUMF1

Mlig455_001786 {REF} {Length: 2514} {TRANSSPLICED} {Pfam: Sulfatase-modifying factor enzyme 1 [PF03781.18, score=249.6]} {Human: ENSG00000144455, SUMF1, sulfatase modifying factor 1, [RH, Score=315, Expect=1e-105]} {Mouse: ENSMUSG00000030101, Sumf1, sulfatase modifying factor 1, [RH, Score=313, Expect=4e-105]} {Dmel: FBgn0035102, CG7049, [RH, Score=285, Expect=2e-94]} {Smed: dd_Smed_v6_8393_0_1, dd_Smed_v6_8393_0_1, [Score=167, Expect=1e-48]} {RNA1509_50776} {RNA1310_22812} {RNA815_42971}

Cumulative graph for MligTC455_42055

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.907	3.185	0.18716	0.81936
RegionR2	-0.223	3.185	0.79277	1.00000
RegionR3	0.113	3.185	0.85505	1.00000
RegionR4	0.115	3.185	0.88393	1.00000
RegionR5	0.623	3.185	0.20759	0.50220
RegionR6	-0.712	3.185	0.22806	0.81053
RegionR7	-0.759	3.185	0.41045	1.00000
RegionR8	-1.064	3.185	0.35261	0.98600

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.872	3.185	0.38990	1.00000
RegenerationR2	0.076	3.185	0.95047	1.00000
RegenerationR3	0.777	3.185	0.29815	0.72957
RegenerationR4	0.007	3.185	0.98278	1.00000
RegenerationR5	0.667	3.185	0.29334	0.72123
RegenerationR6	1.053	3.185	0.19438	0.53371
RegenerationBL	2.958	3.185	0.00325	0.04937
RegenerationTP	-0.017	3.185	0.97950	1.00000

Genes with expression patterns similar to MligTC455_42055

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42055	288	6	Mlig455_001786	Neo: - Age: Down-Down-Up	SUMF1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_001786 {REF} {Length: 2514} {TRANSSPLICED} {Pfam: Sulfatase-modifying factor enzyme 1 [PF03781.18, score=249.6]} {Human: ENSG00000144455, SUMF1, sulfatase modifying factor 1, [RH, Score=315, Expect=1e-105]} {Mouse: ENSMUSG00000030101, Sumf1, sulfatase modifying factor 1, [RH, Score=313, Expect=4e-105]} {Dmel: FBgn0035102, CG7049, [RH, Score=285, Expect=2e-94]} {Smed: dd_Smed_v6_8393_0_1, dd_Smed_v6_8393_0_1, [Score=167, Expect=1e-48]} {RNA1509_50776} {RNA1310_22812} {RNA815_42971}
2.	MligTC455_54320	61	1.28	Mlig455_034926	Neo: Int S/G2/M Age: Down-Up-Down		1.71	-	0.723	0.987	-	-	-	Mlig455_034926 {REF} {Length: 1107} {Pfam: Myb/SANT-like DNA-binding domain [PF13873.8, score=20.5]} {RNA1509_59935} {RNA1310_46586.1, RNA1509_59935} {RNA1509_59935, RNA815_45638}
3.	MligTC455_29382	141	2.94	Mlig455_032367, Mlig455_068516	Neo: - Age: Up-Down-Down		0.969	-	-	-	0.969	-	-	Mlig455_032367 {REF} {Length: 11082} {RNA1509_34218, RNA1509_44206} {RNA1310_18727, RNA1509_34218} {RNA1509_34218, RNA815_16176.1} Mlig455_068516 {REF} {Length: 2460} {RNA1509_38155} {RNA1310_16376} {RNA815_12881}
4.	MligTC455_24349	98	2.03	Mlig455_047679	Neo: - Age: - Region-enriched R4: 4.677/0.01732	GATA4	0.956	-	-	0.956	-	-	-	Mlig455_047679 {REF} {Length: 1965} {Pfam: GATA zinc finger [PF00320.29, score=48.5]} {Human: ENSG00000136574, GATA4, GATA binding protein 4, [Score=94.7, Expect=1e-20]; ENSG00000285109, GATA4, GATA binding protein 4, [Score=94.7, Expect=1e-20]; ENSG00000141448, GATA6, GATA binding protein 6, [Score=92.8, Expect=1e-19]} {Mouse: ENSMUSG00000015627, Gata5, GATA binding protein 5, [Score=100, Expect=5e-23]} {Dmel: FBgn0003507, srp, serpent, [Score=91.3, Expect=2e-19]} {Celegans: WBGene00001250, elt-2, Transcription factor elt-2, [Score=86.3, Expect=3e-18]} {Smed: dd_Smed_v6_8208_0_1, dd_Smed_v6_8208_0_1, [Score=87.8, Expect=5e-19]} {RNA1310_22834.1} {RNA815_35309}
5.	MligTC455_23918	278	5.79	Mlig455_030499	Neo: - Age: -		0.954	0.954	-	-	-	-	-	Mlig455_030499 {REF} {Length: 1733} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF13649.8, score=49.1]; Methyltransferase domain [PF08241.14, score=46.1]; Methyltransferase domain [PF08242.14, score=29.7]; Methyltransferase domain [PF13847.8, score=28.6]; Methyltransferase domain [PF13489.8, score=24.1]} {RNA1509_46318} {RNA1310_38338} {RNA815_45705}
6.	MligTC455_34076	55	1.14	Mlig455_017781	Neo: - Age: - Region-enriched R4: 4.660/0.00297		0.951	-	-	-	0.951	-	-	Mlig455_017781 {REF} {Length: 611} {NoTransDecoderORF} {RNA1509_27316} {RNA1310_65992} {RNA815_31484}
7.	MligTC455_18754	83	1.72	Mlig455_023303	Neo: - Age: Up-Up-Down Region-enriched R4: 3.931/0.01223 Region-enriched R5: 3.414/0.00071		0.95	-	-	0.950	-	-	-	Mlig455_023303 {REF} {Length: 744} {NoTransDecoderORF} {RNA1509_39089} {RNA1310_65556} {RNA815_33743}
8.	MligTC455_29312	242	5.04	Mlig455_024665	Neo: - Age: - Region-enriched R3: 2.630/0.00156 Region-enriched R5: 1.791/0.03664	SLC22A6	0.95	-	-	-	0.950	-	-	Mlig455_024665 {REF} {Length: 4159} {Pfam: Sugar (and other) transporter [PF00083.26, score=112.3]; Major Facilitator Superfamily [PF07690.18, score=83.6]} {Human: ENSG00000197901, SLC22A6, solute carrier family 22 member 6, [Score=184, Expect=1e-50]} {Mouse: ENSMUSG00000024650, Slc22a6, solute carrier family 22 (organic anion transporter), member 6, [Score=174, Expect=4e-47]; ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=172, Expect=3e-46]; ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=170, Expect=2e-45]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=176, Expect=8e-48]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=139, Expect=6e-35]} {Smed: dd_Smed_v6_1159_0_1, dd_Smed_v6_1159_0_1, [Score=132, Expect=7e-33]} {RNA1509_13135, RNA1509_47373, RNA1509_50772} {RNA1310_6359.1, RNA1509_13135, RNA1509_47373, RNA1509_50772} {RNA1509_13135, RNA1509_47373, RNA1509_50772, RNA815_24636}

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