M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_42091

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_42091 33 0.69 Mlig455_033270

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.443

Region-enriched R2: 6.919/0.00376

 POLD2 Mlig455_033270 {REF} {Length: 1678} {TRANSSPLICED} {Pfam: DNA polymerase alpha/epsilon subunit B [PF04042.18, score=147.6]; DNA polymerase delta subunit OB-fold domain [PF18018.3, score=132.3]} {Human: ENSG00000106628, POLD2, DNA polymerase delta 2, accessory subunit, [RH, Score=345, Expect=4e-114]} {Mouse: ENSMUSG00000020471, Pold2, polymerase (DNA directed), delta 2, regulatory subunit, [RH, Score=350, Expect=3e-116]} {Dmel: FBgn0027903, CG12018, [RH, Score=282, Expect=1e-90]} {Celegans: WBGene00008722, F12F6.7, Probable DNA polymerase delta small subunit, [RH, Score=161, Expect=2e-44]} {Smed: dd_Smed_v6_8399_0_1, dd_Smed_v6_8399_0_1, [RH, Score=242, Expect=3e-75]} {RNA1509_24914, RNA1509_57612} {RNA1310_19622.1, RNA1509_57612} {RNA1509_57612, RNA815_16200}

Cumulative graph for MligTC455_42091

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -8.784 1.235 0.99972 1.00000
RegionR2 6.919 1.235 0.00009 0.00376
RegionR3 2.751 1.235 0.10500 0.56701
RegionR4 -2.456 1.235 0.98635 1.00000
RegionR5 2.169 1.235 0.24044 0.55202
RegionR6 2.578 1.235 0.14478 0.68047
RegionR7 -1.658 1.235 1.00000 1.00000
RegionR8 -1.519 1.235 0.99966 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 6.035 1.235 0.99963 1.00000
RegenerationR2 -3.064 1.235 0.00583 0.12188
RegenerationR3 0.69 1.235 0.77670 0.97395
RegenerationR4 -1.126 1.235 0.29162 0.73510
RegenerationR5 -1.981 1.235 0.07464 0.42739
RegenerationR6 -1.702 1.235 0.20600 0.54842
RegenerationBL 2.48 1.235 0.49675 0.86198
RegenerationTP 0.524 1.235 0.99985 1.00000


Genes with expression patterns similar to MligTC455_42091

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_42091 33 0.69 Mlig455_033270

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.443

Region-enriched R2: 6.919/0.00376

 POLD2 4 1.000 1.000 1.000 - 1.000 - Mlig455_033270 {REF} {Length: 1678} {TRANSSPLICED} {Pfam: DNA polymerase alpha/epsilon subunit B [PF04042.18, score=147.6]; DNA polymerase delta subunit OB-fold domain [PF18018.3, score=132.3]} {Human: ENSG00000106628, POLD2, DNA polymerase delta 2, accessory subunit, [RH, Score=345, Expect=4e-114]} {Mouse: ENSMUSG00000020471, Pold2, polymerase (DNA directed), delta 2, regulatory subunit, [RH, Score=350, Expect=3e-116]} {Dmel: FBgn0027903, CG12018, [RH, Score=282, Expect=1e-90]} {Celegans: WBGene00008722, F12F6.7, Probable DNA polymerase delta small subunit, [RH, Score=161, Expect=2e-44]} {Smed: dd_Smed_v6_8399_0_1, dd_Smed_v6_8399_0_1, [RH, Score=242, Expect=3e-75]} {RNA1509_24914, RNA1509_57612} {RNA1310_19622.1, RNA1509_57612} {RNA1509_57612, RNA815_16200}
2. MligTC455_46343 76 1.57 Mlig455_008895, Mlig455_016535

Neo: -

Age: -

 1.789 0.789 - 1.000 - - -

Mlig455_008895 {REF} {Length: 5485} {RNA1509_28528} {RNA1310_45684, RNA1509_28528} {RNA1509_28528, RNA815_21057}

Mlig455_016535 {REF} {Length: 2868} {RNA1509_28528} {RNA1310_45684} {RNA815_21057}
3. MligTC455_14636 22 0.45 Mlig455_062796

Neo: -

Age: -

 0.988 - - - - 0.988 - Mlig455_062796 {REF} {Length: 2154} {NoTransDecoderORF} {RNA1509_54899} {RNA1310_24545} {RNA815_23467}
4. MligTC455_26865 106 2.21 Mlig455_010142

Neo: -

Age: -

 SEL1L3 0.986 - - 0.986 - - - Mlig455_010142 {REF} {Length: 3200} {Pfam: Sel1 repeat [PF08238.14, score=37.9]; Tetratricopeptide repeat [PF13176.8, score=18.5]} {Human: ENSG00000091490, SEL1L3, SEL1L family member 3, [Score=225, Expect=7e-62]} {Mouse: ENSMUSG00000029189, Sel1l3, sel-1 suppressor of lin-12-like 3 (C. elegans), [Score=230, Expect=2e-63]} {Dmel: FBgn0028475, Hrd3, HMG-coA reductase degradation 3, [Score=82.0, Expect=1e-15]} {Celegans: WBGene00004759, sel-1, SEL-1; Suppressor/Enhancer of Lin-12, [Score=84.7, Expect=1e-16]} {Smed: dd_Smed_v6_7527_0_2, dd_Smed_v6_7527_0_2, [Score=336, Expect=9e-102]} {RNA1509_21264} {RNA1310_3921} {RNA815_11098}
5. MligTC455_34915 24 0.5 Mlig455_031088

Neo: -

Age: Up-Down-Down

 ANKRD63 0.979 - - 0.979 - - - Mlig455_031088 {REF} {Length: 2698} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=93.1]; Ankyrin repeats (many copies) [PF13637.8, score=72.2]; Ankyrin repeat [PF00023.32, score=64.7]; Ankyrin repeats (many copies) [PF13857.8, score=60.9]; Ankyrin repeat [PF13606.8, score=56.3]} {Human: ENSG00000230778, ANKRD63, ankyrin repeat domain 63, [Score=122, Expect=2e-31]} {Mouse: ENSMUSG00000078137, Ankrd63, ankyrin repeat domain 63, [Score=123, Expect=1e-31]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=68.6, Expect=2e-12]} {Celegans: WBGene00012124, T28D6.4, [Score=66.2, Expect=9e-12]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=62.8, Expect=1e-10]} {RNA1310_37625.1} {RNA815_39668}
6. MligTC455_38211 76 1.58 Mlig455_036979

Neo: Irradiation

Age: Down-Up-Down

Region-enriched R2: 3.573/0.01981

 0.979 - - 0.979 - - - Mlig455_036979 {REF} {Length: 1583} {Mouse: ENSMUSG00000116315, Jmjd1c, jumonji domain containing 1C, [Score=45.1, Expect=3e-06]; ENSMUSG00000037876, Jmjd1c, jumonji domain containing 1C, [Score=45.1, Expect=3e-06]} {RNA1509_35799} {RNA1310_54546} {RNA815_10592}
7. MligTC455_06002 108 2.24 Mlig455_067469

Neo: -

Age: -

 CHRNA10 0.978 - - 0.978 - - - Mlig455_067469 {REF} {Length: 3906} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=181.7]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=66.5]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=198, Expect=2e-57]; ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=193, Expect=9e-56]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=192, Expect=7e-55]} {Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=199, Expect=6e-58]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=196, Expect=1e-56]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=192, Expect=1e-54]} {Celegans: WBGene00000043, acr-3, Acetylcholine receptor subunit beta-type acr-3, [Score=195, Expect=2e-56]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=226, Expect=3e-67]} {RNA1509_21945} {RNA1310_29351} {RNA815_3782.1}
8. MligTC455_09442 12 0.24 Mlig455_065765

Neo: -

Age: -

 GABBR2 0.978 - - 0.978 - - - Mlig455_065765 {REF} {Length: 2959} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=146.7]; Receptor family ligand binding region [PF01094.30, score=114.9]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=285, Expect=7e-82]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=280, Expect=4e-80]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=239, Expect=2e-65]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [Score=222, Expect=1e-60]} {Smed: dd_Smed_v6_20665_0_1, dd_Smed_v6_20665_0_1, [Score=140, Expect=6e-34]} {RNA1509_58025} {RNA1310_57812} {RNA815_11540}
9. MligTC455_17345 53 1.1 Mlig455_019214

Neo: -

Age: -

 CCDC149 0.978 - - 0.978 - - - Mlig455_019214 {REF} {Length: 3452} {Pfam: Uncharacterized coiled-coil protein (DUF2353) [PF09789.11, score=260.8]} {Human: ENSG00000181982, CCDC149, coiled-coil domain containing 149, [RH, Score=177, Expect=3e-48]} {Mouse: ENSMUSG00000045790, Ccdc149, coiled-coil domain containing 149, [RH, Score=174, Expect=2e-47]} {Dmel: FBgn0038330, CG14868, [RH, Score=149, Expect=1e-38]} {Celegans: WBGene00009258, ccdc-149, Coiled-coil domain-containing protein 149, [RH, Score=88.6, Expect=8e-19]} {Smed: dd_Smed_v6_6893_0_2, dd_Smed_v6_6893_0_2, [RH, Score=216, Expect=4e-64]} {RNA1509_45601} {RNA1310_11651} {RNA815_33141}
10. MligTC455_26408 70 1.46 Mlig455_015776

Neo: Int S/G2/M

Age: Down-Up-Down

 0.978 - - 0.978 - - - Mlig455_015776 {REF} {Length: 1711} {Pfam: Myb/SANT-like DNA-binding domain [PF13837.8, score=35.3]} {RNA1509_43016} {RNA1310_31232, RNA1509_43016} {RNA1509_43016, RNA815_54696}
11. MligTC455_12657 27 0.56 Mlig455_025684

Neo: -

Age: -

 0.974 - - 0.974 - - - Mlig455_025684 {REF} {Length: 187} {NoTransDecoderORF} {RNA1310_148233}
12. MligTC455_03849 38 0.8 Mlig455_057351

Neo: -

Age: -

 0.973 - - 0.973 - - - Mlig455_057351 {REF} {Length: 413} {NoTransDecoderORF}
13. MligTC455_10596 17 0.35 Mlig455_027546

Neo: -

Age: -

 0.973 - - 0.973 - - - Mlig455_027546 {REF} {Length: 555} {NoTransDecoderORF}
14. MligTC455_13235 16 0.33 Mlig455_050287

Neo: -

Age: -

 0.973 - - 0.973 - - - Mlig455_050287 {REF} {Length: 1473} {RNA1310_130834}
15. MligTC455_24950 10 0.21 Mlig455_054045

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.585

 AHNAK 0.973 - - 0.973 - - - Mlig455_054045 {REF} {Length: 4123} {Pfam: Herpes virus major outer envelope glycoprotein (BLLF1) [PF05109.15, score=23.5]; AAA domain [PF13166.8, score=18.0]} {Human: ENSG00000124942, AHNAK, AHNAK nucleoprotein, [Score=90.9, Expect=2e-17]} {Mouse: ENSMUSG00000069833, Ahnak, AHNAK nucleoprotein (desmoyokin), [Score=94.0, Expect=1e-18]} {Dmel: FBgn0259108, futsch, [Score=54.3, Expect=1e-06]} {RNA1310_26440.1} {RNA815_25850.1}
16. MligTC455_27696 121 2.52 Mlig455_019768

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.214/0.01235

 TTC14 0.973 - - 0.973 - - - Mlig455_019768 {REF} {Length: 5967} {Pfam: Tetratricopeptide repeat [PF00515.30, score=48.0]; Tetratricopeptide repeat [PF07719.19, score=38.9]; Tetratricopeptide repeat [PF13181.8, score=34.3]; TPR repeat [PF13414.8, score=33.7]; Tetratricopeptide repeat [PF13428.8, score=30.3]; Tetratricopeptide repeat [PF13371.8, score=29.1]; Tetratricopeptide repeat [PF13431.8, score=24.2]; Tetratricopeptide repeat [PF13432.8, score=23.8]; HCNGP-like protein [PF07818.15, score=22.7]} {Human: ENSG00000163728, TTC14, tetratricopeptide repeat domain 14, [RH, Score=177, Expect=8e-45]} {Mouse: ENSMUSG00000027677, Ttc14, tetratricopeptide repeat domain 14, [RH, Score=171, Expect=3e-43]} {Dmel: FBgn0037855, CG6621, [RH, Score=116, Expect=6e-26]} {Smed: dd_Smed_v6_5265_0_1, dd_Smed_v6_5265_0_1, [RH, Score=113, Expect=2e-26]} {RNA1509_37583} {RNA1310_1352.1} {RNA815_1247.1}
17. MligTC455_33939 15 0.31 Mlig455_018477

Neo: Int S/G2/M

Age: Up-Down-Down, logFC(26M/2M)=-0.565

 GUCY1B1 0.973 - - 0.973 - - - Mlig455_018477 {REF} {Length: 4178} {Pfam: Heme NO binding associated [PF07701.16, score=239.0]; Adenylate and Guanylate cyclase catalytic domain [PF00211.22, score=198.0]; Haem-NO-binding [PF07700.17, score=172.7]} {Human: ENSG00000061918, GUCY1B1, guanylate cyclase 1 soluble subunit beta 1, [Score=343, Expect=9e-106]} {Mouse: ENSMUSG00000021933, Gucy1b2, guanylate cyclase 1, soluble, beta 2, [Score=350, Expect=4e-106]; ENSMUSG00000028005, Gucy1b1, guanylate cyclase 1, soluble, beta 1, [Score=348, Expect=7e-108]} {Dmel: FBgn0038295, Gyc88E, Guanylyl cyclase at 88E, [RH, Score=622, Expect=0.0]} {Celegans: WBGene00001551, gcy-31, Soluble guanylate cyclase gcy-31, [RH, Score=530, Expect=2e-176]} {Smed: dd_Smed_v6_18111_0_1, dd_Smed_v6_18111_0_1, [RH, Score=818, Expect=0.0]} {RNA1509_41885} {RNA1310_21359} {RNA815_6599.2}
18. MligTC455_10209 16 0.33 Mlig455_030396

Neo: -

Age: -

 0.97 - - 0.970 - - - Mlig455_030396 {REF} {Length: 384} {NoTransDecoderORF} {RNA1310_100530} {RNA815_35995.2}
19. MligTC455_14225 11 0.24 Mlig455_039259

Neo: -

Age: -

 0.97 - - 0.970 - - - Mlig455_039259 {REF} {Length: 586} {NoTransDecoderORF} {RNA1310_15486.3} {RNA815_50838}
20. MligTC455_16584 14 0.29 Mlig455_053386

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.479

 0.97 - - 0.970 - - - Mlig455_053386 {REF} {Length: 78} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_35699} {RNA1310_3782.2} {RNA815_22050}
21. MligTC455_23460 40 0.83 Mlig455_008456, Mlig455_008497, Mlig455_008498, Mlig455_015305

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.544

 HLF 0.97 - - 0.970 - - -

Mlig455_008456 {REF} {Length: 2202} {Pfam: Basic region leucine zipper [PF07716.17, score=48.4]; bZIP transcription factor [PF00170.23, score=23.8]} {Human: ENSG00000108924, HLF, HLF, PAR bZIP transcription factor, [RH, Score=85.5, Expect=2e-18]} {Mouse: ENSMUSG00000003949, Hlf, hepatic leukemia factor, [RH, Score=85.5, Expect=1e-18]} {Dmel: FBgn0034096, CG7786, [Score=95.9, Expect=2e-23]} {Celegans: WBGene00000469, ces-2, Cell death specification protein 2, [RH, Score=77.8, Expect=9e-17]} {Smed: dd_Smed_v6_14028_0_1, dd_Smed_v6_14028_0_1, [RH, Score=70.9, Expect=9e-15]} {RNA1509_55988} {RNA1310_15764.1} {RNA815_6404.1}

Mlig455_008497 {REF} {Length: 274} {NoTransDecoderORF}

Mlig455_008498 {REF} {Length: 2707} {Pfam: Basic region leucine zipper [PF07716.17, score=48.4]; bZIP transcription factor [PF00170.23, score=23.8]} {Human: ENSG00000108924, HLF, HLF, PAR bZIP transcription factor, [RH, Score=85.5, Expect=2e-18]} {Mouse: ENSMUSG00000003949, Hlf, hepatic leukemia factor, [RH, Score=85.5, Expect=1e-18]} {Dmel: FBgn0034096, CG7786, [Score=95.9, Expect=2e-23]} {Celegans: WBGene00000469, ces-2, Cell death specification protein 2, [RH, Score=77.8, Expect=9e-17]} {Smed: dd_Smed_v6_14028_0_1, dd_Smed_v6_14028_0_1, [RH, Score=70.9, Expect=9e-15]} {RNA1509_55988} {RNA1310_15764.1} {RNA815_6404.1}

Mlig455_015305 {REF} {Length: 3704} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=62.3]} {Smed: dd_Smed_v6_1574_6_40, dd_Smed_v6_1574_6_40, [Score=175, Expect=8e-46]} {RNA1310_27350} {RNA815_49943}
22. MligTC455_25345 16 0.33 Mlig455_067595

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.519

 0.97 - - 0.970 - - - Mlig455_067595 {REF} {Length: 3236} {TRANSSPLICED} {Celegans: WBGene00013762, Y113G7B.12, [Score=53.9, Expect=5e-07]} {RNA1509_54202} {RNA1310_5109} {RNA815_16616}
23. MligTC455_09443 3 0.07 Mlig455_065752

Neo: -

Age: -

 GABBR2 0.969 - - 0.969 - - - Mlig455_065752 {REF} {Length: 2372} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=148.9]; Receptor family ligand binding region [PF01094.30, score=89.5]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=274, Expect=3e-80]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=270, Expect=1e-78]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=218, Expect=7e-60]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [Score=208, Expect=2e-57]} {Smed: dd_Smed_v6_20665_0_1, dd_Smed_v6_20665_0_1, [Score=128, Expect=8e-31]} {RNA1509_31030} {RNA1310_86261}
24. MligTC455_11440 19 0.4 Mlig455_036653

Neo: -

Age: -

 0.968 - - 0.968 - - - Mlig455_036653 {REF} {Length: 1521} {TRANSSPLICED} {RNA1310_38630} {RNA815_25111}
25. MligTC455_14491 87 1.81 Mlig455_004000, Mlig455_030332

Neo: -

Age: -

 0.968 - - 0.968 - - -

Mlig455_004000 {REF} {Length: 3212} {RNA1509_45036} {RNA1310_28760.1, RNA1509_45036} {RNA1509_45036, RNA815_29529}

Mlig455_030332 {REF} {Length: 442} {NoTransDecoderORF} {RNA1509_45036} {RNA1310_10925.1}
26. MligTC455_16487 12 0.24 Mlig455_004173

Neo: -

Age: -

 0.968 - - 0.968 - - - Mlig455_004173 {REF} {Length: 716} {NoTransDecoderORF} {RNA1310_87874}
27. MligTC455_10196 48 1 Mlig455_035825

Neo: -

Age: logFC(26M/2M)=-0.579

 SOX7 0.965 0.965 - - - - - Mlig455_035825 {REF} {Length: 1154} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=74.3]; HMG-box domain [PF09011.12, score=30.4]; Pleckstrin homology domain [PF15404.8, score=20.3]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=19.5]} {Human: ENSG00000285438, SOX7, SRY-box 7, [Score=116, Expect=8e-30]; ENSG00000171056, SOX7, SRY-box 7, [Score=116, Expect=8e-30]; ENSG00000203883, SOX18, SRY-box 18, [Score=115, Expect=3e-29]; ENSG00000125398, SOX9, SRY-box 9, [Score=113, Expect=5e-28]; ENSG00000164736, SOX17, SRY-box 17, [Score=113, Expect=2e-28]} {Mouse: ENSMUSG00000025902, Sox17, SRY (sex determining region Y)-box 17, [RH, Score=123, Expect=2e-34]} {Dmel: FBgn0005613, Sox15, Sox box protein 15, [Score=116, Expect=4e-29]} {Celegans: WBGene00004950, sox-3, SOX (Mammalian SRY box) family, [Score=107, Expect=5e-28]} {Smed: dd_Smed_v6_36521_0_1, dd_Smed_v6_36521_0_1, [Score=105, Expect=1e-26]} {RNA1310_54737.1} {RNA815_42176}
28. MligTC455_21415 38 0.78 Mlig455_030394, Mlig455_069019

Neo: -

Age: Up-Down-Down

 SCN5A 0.965 - - 0.965 - - -

Mlig455_030394 {REF} {Length: 6394} {Pfam: Ion transport protein [PF00520.33, score=542.0]; Polycystin cation channel [PF08016.14, score=81.1]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=26.0]} {Human: ENSG00000183873, SCN5A, sodium voltage-gated channel alpha subunit 5, [RH, Score=944, Expect=0.0]; ENSG00000185313, SCN10A, sodium voltage-gated channel alpha subunit 10, [RH, Score=910, Expect=0.0]} {Mouse: ENSMUSG00000032511, Scn5a, sodium channel, voltage-gated, type V, alpha, [RH, Score=942, Expect=0.0]; ENSMUSG00000001027, Scn4a, sodium channel, voltage-gated, type IV, alpha, [RH, Score=932, Expect=0.0]; ENSMUSG00000023033, Scn8a, sodium channel, voltage-gated, type VIII, alpha, [RH, Score=924, Expect=0.0]} {Dmel: FBgn0085434, NaCP60E, Na channel protein 60E, [RH, Score=896, Expect=0.0]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=322, Expect=2e-90]} {Smed: dd_Smed_v6_12243_0_1, dd_Smed_v6_12243_0_1, [Score=1238, Expect=0.0]} {RNA1509_26911} {RNA1310_25124} {RNA815_23541}

Mlig455_069019 {REF} {Length: 6623} {Pfam: Ion transport protein [PF00520.33, score=774.7]; Polycystin cation channel [PF08016.14, score=76.9]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=25.2]} {Human: ENSG00000183873, SCN5A, sodium voltage-gated channel alpha subunit 5, [RH, Score=1268, Expect=0.0]; ENSG00000185313, SCN10A, sodium voltage-gated channel alpha subunit 10, [RH, Score=1214, Expect=0.0]} {Mouse: ENSMUSG00000032511, Scn5a, sodium channel, voltage-gated, type V, alpha, [RH, Score=1276, Expect=0.0]} {Dmel: FBgn0085434, NaCP60E, Na channel protein 60E, [RH, Score=899, Expect=0.0]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=322, Expect=9e-89]} {Smed: dd_Smed_v6_12243_0_1, dd_Smed_v6_12243_0_1, [Score=1233, Expect=0.0]} {RNA1509_26911} {RNA1310_25124} {RNA815_23541}
29. MligTC455_28766 46 0.95 Mlig455_041904

Neo: -

Age: -

Region-enriched R6: 3.641/0.01524

 PTRHD1 0.965 - - 0.965 - - - Mlig455_041904 {REF} {Length: 2121} {TRANSSPLICED} {Pfam: Peptidyl-tRNA hydrolase PTH2 [PF01981.18, score=84.9]} {Human: ENSG00000184924, PTRHD1, peptidyl-tRNA hydrolase domain containing 1, [RH, Score=103, Expect=3e-29]} {Mouse: ENSMUSG00000096199, Ptrhd1, peptidyl-tRNA hydrolase domain containing 1, [RH, Score=107, Expect=6e-31]} {Dmel: FBgn0038446, CG14903, [RH, Score=140, Expect=2e-44]} {Celegans: WBGene00050885, Y94H6A.12, [RH, Score=122, Expect=5e-37]} {Smed: dd_Smed_v6_6409_0_1, dd_Smed_v6_6409_0_1, [RH, Score=127, Expect=4e-39]} {RNA1509_51707} {RNA1310_42234} {RNA815_30800}
30. MligTC455_25786 72 1.5 Mlig455_040831

Neo: -

Age: -

Region-enriched R4: 4.547/0.02758

 PHKG1 0.964 - - 0.964 - - - Mlig455_040831 {REF} {Length: 3417} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=243.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=114.0]; Kinase-like [PF14531.8, score=25.6]; Haspin like kinase domain [PF12330.10, score=24.4]; Phosphotransferase enzyme family [PF01636.25, score=19.7]; Fungal protein kinase [PF17667.3, score=19.4]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=18.2]} {Human: ENSG00000164776, PHKG1, phosphorylase kinase catalytic subunit gamma 1, [RH, Score=372, Expect=5e-127]; ENSG00000156873, PHKG2, phosphorylase kinase catalytic subunit gamma 2, [RH, Score=361, Expect=2e-122]} {Mouse: ENSMUSG00000025537, Phkg1, phosphorylase kinase gamma 1, [RH, Score=365, Expect=2e-124]; ENSMUSG00000030815, Phkg2, phosphorylase kinase, gamma 2 (testis), [RH, Score=363, Expect=1e-123]} {Dmel: FBgn0011754, PhKgamma, Phosphorylase kinase gamma, [RH, Score=385, Expect=2e-132]} {Celegans: WBGene00021753, Y50D7A.3, [RH, Score=314, Expect=2e-103]} {Smed: dd_Smed_v6_7480_0_2, dd_Smed_v6_7480_0_2, [Score=218, Expect=5e-66]} {RNA1509_58909} {RNA1310_10334.1, RNA1509_58909} {RNA1509_58909, RNA815_18526}
31. MligTC455_39939 498 10.37 Mlig455_023795, Mlig455_066344

Neo: Int S/G2/M

Age: -

Region-enriched R2: 2.254/0.04221

 IMPAD1 0.964 - - 0.964 - - -

Mlig455_023795 {REF} {Length: 5670} {TRANSSPLICED} {Pfam: Inositol monophosphatase family [PF00459.27, score=125.0]; GWT1 [PF06423.14, score=63.5]; GlcNAc-PI de-N-acetylase [PF02585.19, score=59.3]} {Human: ENSG00000104331, IMPAD1, inositol monophosphatase domain containing 1, [RH, Score=154, Expect=3e-40]} {Mouse: ENSMUSG00000066324, Impad1, inositol monophosphatase domain containing 1, [RH, Score=151, Expect=2e-39]} {Dmel: FBgn0030465, CG15743, [RH, Score=168, Expect=2e-45]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [RH, Score=143, Expect=6e-36]} {Smed: dd_Smed_v6_9579_0_1, dd_Smed_v6_9579_0_1, [RH, Score=135, Expect=8e-34]} {RNA1509_37543, RNA1509_48069} {RNA1310_8844, RNA1509_48069} {RNA1509_48069, RNA815_11962}

Mlig455_066344 {REF} {Length: 4479} {TRANSSPLICED} {Pfam: Inositol monophosphatase family [PF00459.27, score=125.4]; GWT1 [PF06423.14, score=63.6]; GlcNAc-PI de-N-acetylase [PF02585.19, score=59.1]} {Human: ENSG00000104331, IMPAD1, inositol monophosphatase domain containing 1, [RH, Score=152, Expect=2e-39]} {Mouse: ENSMUSG00000066324, Impad1, inositol monophosphatase domain containing 1, [RH, Score=148, Expect=1e-38]} {Dmel: FBgn0030465, CG15743, [RH, Score=165, Expect=2e-44]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [RH, Score=143, Expect=8e-36]} {Smed: dd_Smed_v6_9579_0_1, dd_Smed_v6_9579_0_1, [RH, Score=136, Expect=4e-34]} {RNA1509_37543} {RNA1310_8844} {RNA815_11962}
32. MligTC455_11309 35 0.73 Mlig455_031805

Neo: -

Age: -

 0.962 - - 0.962 - - - Mlig455_031805 {REF} {Length: 2416} {RNA1509_35450} {RNA1310_38823} {RNA815_30372}
33. MligTC455_03359 17 0.35 Mlig455_037386

Neo: -

Age: -

 0.961 - - 0.961 - - - Mlig455_037386 {REF} {Length: 1323} {Pfam: Lectin C-type domain [PF00059.23, score=22.2]} {RNA1310_22051} {RNA815_28288}
34. MligTC455_33739 13 0.28 Mlig455_054829

Neo: -

Age: -

 0.961 - - 0.961 - - - Mlig455_054829 {REF} {Length: 2343} {Pfam: Integrase core domain [PF00665.28, score=34.8]} {Smed: dd_Smed_v6_11155_0_5, dd_Smed_v6_11155_0_5, [Score=59.3, Expect=2e-11]} {RNA1509_14058} {RNA1310_29476} {RNA815_43724}
35. MligTC455_38880 31 0.65 Mlig455_057464

Neo: -

Age: -

 GRIA2 0.961 - - 0.961 - - - Mlig455_057464 {REF} {Length: 3626} {Pfam: Ligand-gated ion channel [PF00060.28, score=91.1]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=53.4]; Receptor family ligand binding region [PF01094.30, score=40.3]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=38.7]} {Human: ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=157, Expect=4e-39]; ENSG00000182771, GRID1, glutamate ionotropic receptor delta type subunit 1, [Score=151, Expect=5e-37]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=150, Expect=9e-37]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=157, Expect=3e-39]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=150, Expect=8e-37]} {Dmel: FBgn0038837, CG3822, [Score=149, Expect=7e-37]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=132, Expect=3e-31]} {Smed: dd_Smed_v6_21015_0_1, dd_Smed_v6_21015_0_1, [Score=270, Expect=1e-82]} {RNA1310_21369} {RNA815_25524}
36. MligTC455_25785 47 0.97 Mlig455_046276

Neo: -

Age: -

 0.96 - - 0.960 - - - Mlig455_046276 {REF} {Length: 1627} {RNA1509_22707} {RNA1310_33596.2} {RNA815_24119.2}
37. MligTC455_49609 51 1.06 Mlig455_033484

Neo: Germline

Age: -

 0.96 0.960 - - - - - Mlig455_033484 {REF} {Length: 2578} {TRANSSPLICED} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=41.8]} {Smed: dd_Smed_v6_56204_0_1, dd_Smed_v6_56204_0_1, [Score=55.8, Expect=3e-08]} {RNA1509_28576} {RNA1310_4752.1} {RNA815_1657.1}
38. MligTC455_24324 75 1.57 Mlig455_058376

Neo: -

Age: -

Region-enriched R5: 4.287/0.00044

 ANKMY2 0.958 0.958 - - - - - Mlig455_058376 {REF} {Length: 2431} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=45.7]; Ankyrin repeats (many copies) [PF13637.8, score=39.4]; Ankyrin repeat [PF13606.8, score=34.8]; Ankyrin repeat [PF00023.32, score=32.9]; Ankyrin repeats (many copies) [PF13857.8, score=29.1]} {Human: ENSG00000106524, ANKMY2, ankyrin repeat and MYND domain containing 2, [Score=147, Expect=2e-40]} {Mouse: ENSMUSG00000036188, Ankmy2, ankyrin repeat and MYND domain containing 2, [Score=143, Expect=3e-39]} {Dmel: FBgn0036096, CG8003, [Score=120, Expect=3e-31]} {Celegans: WBGene00000917, daf-25, Dauer abnormal formation protein 25, [Score=73.2, Expect=2e-14]} {Smed: dd_Smed_v6_5921_0_2, dd_Smed_v6_5921_0_2, [Score=138, Expect=5e-38]} {RNA1509_45613} {RNA1310_44064} {RNA815_18603}
39. MligTC455_22516 7 0.14 Mlig455_008886

Neo: -

Age: -

 0.955 0.955 - - - - - Mlig455_008886 {REF} {Length: 1547} {RNA1310_9659.1} {RNA815_23635}
40. MligTC455_34042 123 2.57 Mlig455_019146, Mlig455_038671

Neo: -

Age: -

 0.953 - - 0.953 - - -

Mlig455_019146 {REF} {Length: 1572} {RNA1509_50859} {RNA1310_15215.1, RNA1509_50859} {RNA1509_50859, RNA815_6979.1}

Mlig455_038671 {REF} {Length: 1155} {RNA1509_50859} {RNA1310_15215.1} {RNA815_6979.1}
41. MligTC455_38062 26 0.55 Mlig455_015619

Neo: -

Age: -

 0.952 - - 0.952 - - - Mlig455_015619 {REF} {Length: 1624} {NoTransDecoderORF} {RNA1509_29114} {RNA1310_21909.2} {RNA815_54554}
42. MligTC455_57008 10 0.22 Mlig455_044186

Neo: -

Age: -

 0.952 - - 0.952 - - - Mlig455_044186 {REF} {Length: 852} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=46.6]} {RNA1509_47056} {RNA1310_46488.2} {RNA815_14744.1}
43. MligTC455_39580 52 1.08 Mlig455_064010

Neo: -

Age: -

 0.951 - - 0.951 - - - Mlig455_064010 {REF} {Length: 1386} {Pfam: Eco47II restriction endonuclease [PF09553.12, score=19.7]} {RNA1509_49715} {RNA1310_24655} {RNA815_31399}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA