TomoSeq data search

Data search

Results for MligTC455_42221

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42221

449

9.36

Mlig455_047339, Mlig455_069327

Neo: -

Age: Up-Down-Up

Region-enriched R3: 2.132/0.02218

ANK1

Mlig455_047339 {REF} {Length: 4400} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=75.9]; Ankyrin repeats (many copies) [PF13857.8, score=70.9]; Ankyrin repeats (many copies) [PF13637.8, score=64.6]; Ankyrin repeat [PF00023.32, score=62.6]; Ankyrin repeat [PF13606.8, score=58.5]; Ion transport protein [PF00520.33, score=57.2]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=87.8, Expect=6e-17]; ENSG00000173273, TNKS, tankyrase, [Score=86.7, Expect=1e-16]; ENSG00000285372, AC270292.3, tankyrase, [Score=85.5, Expect=3e-16]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=85.9, Expect=2e-16]; ENSMUSG00000031529, Tnks, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase, [Score=85.9, Expect=2e-16]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=80.5, Expect=5e-15]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=72.4, Expect=1e-12]} {Smed: dd_Smed_v6_8547_0_1, dd_Smed_v6_8547_0_1, [Score=80.1, Expect=4e-15]} {RNA1509_10218} {RNA1310_5033.1} {RNA815_7398}

Mlig455_069327 {REF} {Length: 4207} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=76.0]; Ankyrin repeats (many copies) [PF13857.8, score=71.0]; Ankyrin repeats (many copies) [PF13637.8, score=64.6]; Ankyrin repeat [PF00023.32, score=62.7]; Ankyrin repeat [PF13606.8, score=58.7]; Ion transport protein [PF00520.33, score=57.0]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=88.2, Expect=6e-17]; ENSG00000173273, TNKS, tankyrase, [Score=86.7, Expect=1e-16]; ENSG00000285372, AC270292.3, tankyrase, [Score=85.5, Expect=3e-16]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=85.9, Expect=2e-16]; ENSMUSG00000031529, Tnks, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase, [Score=85.9, Expect=2e-16]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=81.3, Expect=3e-15]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=72.8, Expect=8e-13]} {Smed: dd_Smed_v6_8547_0_1, dd_Smed_v6_8547_0_1, [Score=80.1, Expect=4e-15]} {RNA1509_10218} {RNA1310_5033.1} {RNA815_7398}

Cumulative graph for MligTC455_42221

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.428	3.569	0.09603	0.65931
RegionR2	1.443	3.569	0.11245	0.41452
RegionR3	2.132	3.569	0.00068	0.02218
RegionR4	1.176	3.569	0.18506	0.45750
RegionR5	0.951	3.569	0.23203	0.53920
RegionR6	-0.157	3.569	0.89699	1.00000
RegionR7	0.06	3.569	0.83368	1.00000
RegionR8	0.824	3.569	0.46855	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	6.782	3.569	0.10195	0.81947
RegenerationR2	0.078	3.569	0.86763	1.00000
RegenerationR3	-0.602	3.569	0.24265	0.67753
RegenerationR4	-0.274	3.569	0.62631	0.92209
RegenerationR5	-0.455	3.569	0.37946	0.78645
RegenerationR6	-0.392	3.569	0.55073	0.83922
RegenerationBL	0.145	3.569	0.83545	1.00000
RegenerationTP	-3.348	3.569	0.00608	0.13092

Genes with expression patterns similar to MligTC455_42221

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42221	449	9.36	Mlig455_047339, Mlig455_069327	Neo: - Age: Up-Down-Up Region-enriched R3: 2.132/0.02218	ANK1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_047339 {REF} {Length: 4400} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=75.9]; Ankyrin repeats (many copies) [PF13857.8, score=70.9]; Ankyrin repeats (many copies) [PF13637.8, score=64.6]; Ankyrin repeat [PF00023.32, score=62.6]; Ankyrin repeat [PF13606.8, score=58.5]; Ion transport protein [PF00520.33, score=57.2]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=87.8, Expect=6e-17]; ENSG00000173273, TNKS, tankyrase, [Score=86.7, Expect=1e-16]; ENSG00000285372, AC270292.3, tankyrase, [Score=85.5, Expect=3e-16]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=85.9, Expect=2e-16]; ENSMUSG00000031529, Tnks, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase, [Score=85.9, Expect=2e-16]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=80.5, Expect=5e-15]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=72.4, Expect=1e-12]} {Smed: dd_Smed_v6_8547_0_1, dd_Smed_v6_8547_0_1, [Score=80.1, Expect=4e-15]} {RNA1509_10218} {RNA1310_5033.1} {RNA815_7398} Mlig455_069327 {REF} {Length: 4207} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=76.0]; Ankyrin repeats (many copies) [PF13857.8, score=71.0]; Ankyrin repeats (many copies) [PF13637.8, score=64.6]; Ankyrin repeat [PF00023.32, score=62.7]; Ankyrin repeat [PF13606.8, score=58.7]; Ion transport protein [PF00520.33, score=57.0]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=88.2, Expect=6e-17]; ENSG00000173273, TNKS, tankyrase, [Score=86.7, Expect=1e-16]; ENSG00000285372, AC270292.3, tankyrase, [Score=85.5, Expect=3e-16]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=85.9, Expect=2e-16]; ENSMUSG00000031529, Tnks, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase, [Score=85.9, Expect=2e-16]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=81.3, Expect=3e-15]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=72.8, Expect=8e-13]} {Smed: dd_Smed_v6_8547_0_1, dd_Smed_v6_8547_0_1, [Score=80.1, Expect=4e-15]} {RNA1509_10218} {RNA1310_5033.1} {RNA815_7398}
2.	MligTC455_19335	1133	23.6	Mlig455_024645, Mlig455_050702	Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.645 Region-enriched R2: 2.051/0.04089	ANKRD60	1.766	-	-	-	0.802	-	0.964	Mlig455_024645 {REF} {Length: 1847} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=51.8]; Ankyrin repeats (3 copies) [PF12796.9, score=46.9]; Ankyrin repeat [PF00023.32, score=42.0]; Ankyrin repeat [PF13606.8, score=41.3]; Ankyrin repeats (many copies) [PF13857.8, score=40.2]} {Human: ENSG00000124227, ANKRD60, ankyrin repeat domain 60, [Score=130, Expect=5e-34]} {Mouse: ENSMUSG00000027517, Ankrd60, ankyrin repeat domain 60, [Score=127, Expect=4e-33]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=70.5, Expect=1e-12]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=58.9, Expect=5e-09]} {Smed: dd_Smed_v6_8330_0_1, dd_Smed_v6_8330_0_1, [Score=313, Expect=3e-103]} {RNA1509_24459} {RNA1310_10231.1} {RNA815_3110} Mlig455_050702 {REF} {Length: 1829} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=51.8]; Ankyrin repeats (3 copies) [PF12796.9, score=46.9]; Ankyrin repeat [PF00023.32, score=42.0]; Ankyrin repeat [PF13606.8, score=41.3]; Ankyrin repeats (many copies) [PF13857.8, score=40.2]} {Human: ENSG00000124227, ANKRD60, ankyrin repeat domain 60, [Score=130, Expect=5e-34]} {Mouse: ENSMUSG00000027517, Ankrd60, ankyrin repeat domain 60, [Score=127, Expect=4e-33]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=70.5, Expect=1e-12]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=58.9, Expect=5e-09]} {Smed: dd_Smed_v6_8330_0_1, dd_Smed_v6_8330_0_1, [Score=313, Expect=3e-103]} {RNA1509_24459} {RNA1310_10231.1} {RNA815_3110}
3.	MligTC455_52833	100	2.08	Mlig455_043991	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.880		0.964	-	-	-	0.964	-	-	Mlig455_043991 {REF} {Length: 3193} {Pfam: Profilin [PF00235.21, score=35.5]} {RNA1509_27250} {RNA1310_34825, RNA1509_27250} {RNA1509_27250, RNA815_20875}
4.	MligTC455_09828	80	1.67	Mlig455_052764	Neo: - Age: -		0.956	-	-	-	0.956	-	-	Mlig455_052764 {REF} {Length: 1206} {NoTransDecoderORF} {RNA1310_17510.1} {RNA815_9674}
5.	MligTC455_28476	731	15.23	Mlig455_060387	Neo: - Age: logFC(26M/2M)=-0.326 Region-enriched R2: 1.963/0.00119		0.956	-	-	-	0.956	-	-	Mlig455_060387 {REF} {Length: 5044} {Smed: dd_Smed_v6_5297_0_1, dd_Smed_v6_5297_0_1, [RH, Score=241, Expect=2e-65]} {RNA1509_3272} {RNA1310_3570} {RNA815_1056}
6.	MligTC455_33333	108	2.25	Mlig455_009412, Mlig455_016106	Neo: - Age: logFC(26M/2M)=1.616 Region-enriched R2: 3.029/0.03615		0.956	-	-	-	0.956	-	-	Mlig455_009412 {REF} {Length: 2018} {TRANSSPLICED} {Pfam: Innexin [PF00876.20, score=265.5]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=83.2, Expect=3e-17]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=184, Expect=8e-55]} {Smed: dd_Smed_v6_10766_0_1, dd_Smed_v6_10766_0_1, [Score=244, Expect=3e-76]} {RNA1509_36671} {RNA1310_14554} {RNA815_16793} Mlig455_016106 {REF} {Length: 2018} {TRANSSPLICED} {Pfam: Innexin [PF00876.20, score=265.5]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=83.2, Expect=3e-17]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=184, Expect=8e-55]} {Smed: dd_Smed_v6_10766_0_1, dd_Smed_v6_10766_0_1, [Score=244, Expect=3e-76]} {RNA1509_36671} {RNA1310_14554} {RNA815_16793}
7.	MligTC455_17738	600	12.49	Mlig455_005267	Neo: - Age: Up-Down-Up	PKNOX2	0.955	-	-	-	-	-	0.955	Mlig455_005267 {REF} {Length: 4191} {Pfam: Homeobox KN domain [PF05920.13, score=68.1]; N-terminal of Homeobox Meis and PKNOX1 [PF16493.7, score=55.5]; Homeodomain [PF00046.31, score=30.5]} {Human: ENSG00000165495, PKNOX2, PBX/knotted 1 homeobox 2, [RH, Score=209, Expect=1e-59]} {Mouse: ENSMUSG00000035934, Pknox2, Pbx/knotted 1 homeobox 2, [RH, Score=209, Expect=2e-59]} {Dmel: FBgn0001235, hth, homothorax, [Score=117, Expect=1e-27]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [Score=107, Expect=3e-24]} {Smed: dd_Smed_v6_8606_0_1, dd_Smed_v6_8606_0_1, [Score=258, Expect=2e-75]} {RNA1509_58890} {RNA1310_1426.1} {RNA815_7214}
8.	MligTC455_20495	221	4.6	Mlig455_031274	Neo: - Age: -	KIF17	0.954	-	-	-	-	-	0.954	Mlig455_031274 {REF} {Length: 4136} {TRANSSPLICED} {Pfam: Kinesin motor domain [PF00225.25, score=391.2]; Microtubule binding [PF16796.7, score=73.9]} {Human: ENSG00000117245, KIF17, kinesin family member 17, [RH, Score=643, Expect=0.0]} {Mouse: ENSMUSG00000028758, Kif17, kinesin family member 17, [RH, Score=659, Expect=0.0]} {Dmel: FBgn0039925, Kif3C, Kinesin family member 3C, [RH, Score=428, Expect=6e-139]} {Celegans: WBGene00003884, osm-3, Osmotic avoidance abnormal protein 3, [Score=531, Expect=2e-178]} {Smed: dd_Smed_v6_13424_0_2, dd_Smed_v6_13424_0_2, [RH, Score=699, Expect=0.0]} {RNA1509_18698} {RNA1310_4177.1, RNA1509_18698} {RNA1509_18698, RNA815_1205}
9.	MligTC455_20496	224	4.66	Mlig455_031319	Neo: - Age: -	ANGPT4	0.954	-	-	-	-	-	0.954	Mlig455_031319 {REF} {Length: 3388} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=85.2]} {Human: ENSG00000101280, ANGPT4, angiopoietin 4, [Score=77.0, Expect=3e-14]; ENSG00000091879, ANGPT2, angiopoietin 2, [Score=76.6, Expect=3e-14]; ENSG00000171560, FGA, fibrinogen alpha chain, [Score=75.9, Expect=1e-13]; ENSG00000171557, FGG, fibrinogen gamma chain, [Score=75.9, Expect=5e-14]; ENSG00000167772, ANGPTL4, angiopoietin like 4, [Score=73.6, Expect=2e-13]} {Mouse: ENSMUSG00000028001, Fga, fibrinogen alpha chain, [Score=76.6, Expect=4e-14]; ENSMUSG00000031465, Angpt2, angiopoietin 2, [Score=75.1, Expect=8e-14]; ENSMUSG00000027460, Angpt4, angiopoietin 4, [Score=74.3, Expect=1e-13]} {Dmel: FBgn0051832, CG31832, [Score=66.2, Expect=5e-12]} {Celegans: WBGene00017013, ensh-1, [Score=50.8, Expect=2e-06]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=78.2, Expect=5e-15]} {RNA1509_35662, RNA1509_9904} {RNA1310_4769, RNA1509_35662} {RNA1509_35662, RNA815_1205}
10.	MligTC455_41771	284	5.93	Mlig455_012555, Mlig455_012559, Mlig455_070232	Neo: - Age: Up-Down-Down Region-enriched R3: 3.067/0.00556	TRPV4, TRPV6	0.953	-	-	-	0.953	-	-	Mlig455_012555 {REF} {Length: 2489} {Pfam: Ion transport protein [PF00520.33, score=34.4]; Polycystin cation channel [PF08016.14, score=21.2]} {Human: ENSG00000111199, TRPV4, transient receptor potential cation channel subfamily V member 4, [Score=63.5, Expect=3e-10]} {Mouse: ENSMUSG00000014158, Trpv4, transient receptor potential cation channel, subfamily V, member 4, [Score=60.8, Expect=2e-09]} {Dmel: FBgn0086693, iav, inactive, [Score=219, Expect=5e-63]} {Celegans: WBGene00003889, osm-9, Olfactory channel, [Score=179, Expect=2e-49]} {Smed: dd_Smed_v6_28914_0_1, dd_Smed_v6_28914_0_1, [Score=197, Expect=7e-56]} {RNA1509_51786} {RNA1310_30522.1} {RNA815_8977} Mlig455_012559 {REF} {Length: 1134} {Pfam: Ion transport protein [PF00520.33, score=26.2]} {Dmel: FBgn0086693, iav, inactive, [Score=85.5, Expect=1e-18]} {Celegans: WBGene00003889, osm-9, Olfactory channel, [Score=74.7, Expect=3e-15]} {Smed: dd_Smed_v6_23397_0_1, dd_Smed_v6_23397_0_1, [Score=101, Expect=2e-25]} {RNA1509_51786} {RNA1310_30522.1} {RNA815_32138} Mlig455_070232 {REF} {Length: 4035} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=54.6]; Ankyrin repeat [PF13606.8, score=41.3]; Ankyrin repeat [PF00023.32, score=38.5]; Ankyrin repeats (many copies) [PF13857.8, score=35.3]; Ion transport protein [PF00520.33, score=33.1]; Ankyrin repeats (many copies) [PF13637.8, score=29.3]; Polycystin cation channel [PF08016.14, score=19.5]} {Human: ENSG00000276971, TRPV6, transient receptor potential cation channel subfamily V member 6, [RH, Score=202, Expect=4e-54]; ENSG00000165125, TRPV6, transient receptor potential cation channel subfamily V member 6, [RH, Score=202, Expect=8e-54]; ENSG00000127412, TRPV5, transient receptor potential cation channel subfamily V member 5, [RH, Score=196, Expect=5e-52]; ENSG00000274348, TRPV5, transient receptor potential cation channel subfamily V member 5, [RH, Score=196, Expect=5e-52]} {Mouse: ENSMUSG00000036899, Trpv5, transient receptor potential cation channel, subfamily V, member 5, [RH, Score=195, Expect=8e-52]} {Dmel: FBgn0086693, iav, inactive, [RH, Score=538, Expect=5e-175]} {Celegans: WBGene00003889, osm-9, Olfactory channel, [RH, Score=504, Expect=2e-164]} {Smed: dd_Smed_v6_28914_0_1, dd_Smed_v6_28914_0_1, [RH, Score=531, Expect=5e-176]} {RNA1509_51786} {RNA1310_16729, RNA1509_51786} {RNA1509_51786, RNA815_8977}
11.	MligTC455_17778	198	4.12	Mlig455_021327	Neo: - Age: -		0.95	-	-	-	0.950	-	-	Mlig455_021327 {REF} {Length: 416} {TRANSSPLICED} {RNA1509_23323} {RNA1310_114939}

Berezikov Lab - 2020-2021 © ERIBA