TomoSeq data search

Data search

Results for MligTC455_42251

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_42251	245	5.11	Mlig455_038029	Neo: - Age: logFC(26M/2M)=-0.299	USP48	Mlig455_038029 {REF} {Length: 3322} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=103.5]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=44.8]} {Human: ENSG00000090686, USP48, ubiquitin specific peptidase 48, [Score=85.1, Expect=1e-16]; ENSG00000136014, USP44, ubiquitin specific peptidase 44, [Score=84.0, Expect=7e-16]; ENSG00000106346, USP42, ubiquitin specific peptidase 42, [Score=82.8, Expect=2e-15]} {Mouse: ENSMUSG00000043411, Usp48, ubiquitin specific peptidase 48, [Score=91.7, Expect=1e-18]} {Dmel: FBgn0039214, puf, puffyeye, [Score=83.6, Expect=7e-16]} {Celegans: WBGene00010702, usp-33, Ubiquitin carboxyl-terminal hydrolase, [Score=81.3, Expect=2e-15]} {Smed: dd_Smed_v6_7150_0_3, dd_Smed_v6_7150_0_3, [Score=77.0, Expect=2e-14]} {RNA1509_17169, RNA1509_58812} {RNA1310_7010, RNA1509_58812} {RNA1509_58812, RNA815_4869}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42251

245

5.11

Mlig455_038029

Neo: -

Age: logFC(26M/2M)=-0.299

USP48

Mlig455_038029 {REF} {Length: 3322} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=103.5]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=44.8]} {Human: ENSG00000090686, USP48, ubiquitin specific peptidase 48, [Score=85.1, Expect=1e-16]; ENSG00000136014, USP44, ubiquitin specific peptidase 44, [Score=84.0, Expect=7e-16]; ENSG00000106346, USP42, ubiquitin specific peptidase 42, [Score=82.8, Expect=2e-15]} {Mouse: ENSMUSG00000043411, Usp48, ubiquitin specific peptidase 48, [Score=91.7, Expect=1e-18]} {Dmel: FBgn0039214, puf, puffyeye, [Score=83.6, Expect=7e-16]} {Celegans: WBGene00010702, usp-33, Ubiquitin carboxyl-terminal hydrolase, [Score=81.3, Expect=2e-15]} {Smed: dd_Smed_v6_7150_0_3, dd_Smed_v6_7150_0_3, [Score=77.0, Expect=2e-14]} {RNA1509_17169, RNA1509_58812} {RNA1310_7010, RNA1509_58812} {RNA1509_58812, RNA815_4869}

Cumulative graph for MligTC455_42251

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.208	2.88	0.50610	1.00000
RegionR2	-0.661	2.88	0.38658	0.78101
RegionR3	-0.734	2.88	0.20796	0.74836
RegionR4	0.823	2.88	0.25766	0.55914
RegionR5	-0.447	2.88	0.38111	0.73539
RegionR6	-0.541	2.88	0.35291	0.93740
RegionR7	-0.152	2.88	0.84758	1.00000
RegionR8	0.504	2.88	0.56500	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.114	2.88	0.95651	1.00000
RegenerationR2	0.452	2.88	0.43967	0.84006
RegenerationR3	0.343	2.88	0.62272	0.91753
RegenerationR4	-1.179	2.88	0.09493	0.47955
RegenerationR5	0.325	2.88	0.59591	0.90853
RegenerationR6	1.179	2.88	0.06780	0.32652
RegenerationBL	0.129	2.88	0.88041	1.00000
RegenerationTP	-0.286	2.88	0.73603	1.00000

Genes with expression patterns similar to MligTC455_42251

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42251	245	5.11	Mlig455_038029	Neo: - Age: logFC(26M/2M)=-0.299	USP48	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_038029 {REF} {Length: 3322} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=103.5]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=44.8]} {Human: ENSG00000090686, USP48, ubiquitin specific peptidase 48, [Score=85.1, Expect=1e-16]; ENSG00000136014, USP44, ubiquitin specific peptidase 44, [Score=84.0, Expect=7e-16]; ENSG00000106346, USP42, ubiquitin specific peptidase 42, [Score=82.8, Expect=2e-15]} {Mouse: ENSMUSG00000043411, Usp48, ubiquitin specific peptidase 48, [Score=91.7, Expect=1e-18]} {Dmel: FBgn0039214, puf, puffyeye, [Score=83.6, Expect=7e-16]} {Celegans: WBGene00010702, usp-33, Ubiquitin carboxyl-terminal hydrolase, [Score=81.3, Expect=2e-15]} {Smed: dd_Smed_v6_7150_0_3, dd_Smed_v6_7150_0_3, [Score=77.0, Expect=2e-14]} {RNA1509_17169, RNA1509_58812} {RNA1310_7010, RNA1509_58812} {RNA1509_58812, RNA815_4869}
2.	MligTC455_43108	812	16.91	Mlig455_017815	Neo: - Age: -	SEL1L	1.761	-	-	-	0.810	-	0.951	Mlig455_017815 {REF} {Length: 4083} {TRANSSPLICED} {Pfam: Sel1 repeat [PF08238.14, score=128.1]} {Human: ENSG00000071537, SEL1L, SEL1L, ERAD E3 ligase adaptor subunit, [RH, Score=574, Expect=0.0]} {Mouse: ENSMUSG00000020964, Sel1l, sel-1 suppressor of lin-12-like (C. elegans), [RH, Score=578, Expect=0.0]} {Dmel: FBgn0028475, Hrd3, HMG-coA reductase degradation 3, [RH, Score=462, Expect=5e-149]} {Celegans: WBGene00004759, sel-1, SEL-1; Suppressor/Enhancer of Lin-12, [RH, Score=442, Expect=6e-143]} {Smed: dd_Smed_v6_3464_0_1, dd_Smed_v6_3464_0_1, [RH, Score=554, Expect=0.0]} {RNA1509_41995, RNA1509_51735, RNA1509_54114} {RNA1310_4441, RNA1509_41995, RNA1509_51735, RNA1509_54114} {RNA1509_41995, RNA1509_51735, RNA1509_54114, RNA815_1031.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_42251

245

5.11

Mlig455_038029

Neo: -

Age: logFC(26M/2M)=-0.299

USP48

1.000

MligTC455_43108

812

16.91

Mlig455_017815

Neo: -

Age: -

SEL1L

1.761

0.810

0.951

Mlig455_017815 {REF} {Length: 4083} {TRANSSPLICED} {Pfam: Sel1 repeat [PF08238.14, score=128.1]} {Human: ENSG00000071537, SEL1L, SEL1L, ERAD E3 ligase adaptor subunit, [RH, Score=574, Expect=0.0]} {Mouse: ENSMUSG00000020964, Sel1l, sel-1 suppressor of lin-12-like (C. elegans), [RH, Score=578, Expect=0.0]} {Dmel: FBgn0028475, Hrd3, HMG-coA reductase degradation 3, [RH, Score=462, Expect=5e-149]} {Celegans: WBGene00004759, sel-1, SEL-1; Suppressor/Enhancer of Lin-12, [RH, Score=442, Expect=6e-143]} {Smed: dd_Smed_v6_3464_0_1, dd_Smed_v6_3464_0_1, [RH, Score=554, Expect=0.0]} {RNA1509_41995, RNA1509_51735, RNA1509_54114} {RNA1310_4441, RNA1509_41995, RNA1509_51735, RNA1509_54114} {RNA1509_41995, RNA1509_51735, RNA1509_54114, RNA815_1031.1}