Data search


search
Exact
Search

Results for MligTC455_42269

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_42269 1072 22.34 Mlig455_050498

Neo: -

Age: -

PGM3 Mlig455_050498 {REF} {Length: 2022} {TRANSSPLICED} {Pfam: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I [PF02878.18, score=52.1]; Phosphoglucomutase/phosphomannomutase, C-terminal domain [PF00408.22, score=46.8]; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III [PF02880.18, score=26.5]} {Human: ENSG00000013375, PGM3, phosphoglucomutase 3, [RH, Score=469, Expect=7e-160]} {Mouse: ENSMUSG00000056131, Pgm3, phosphoglucomutase 3, [RH, Score=471, Expect=9e-161]} {Dmel: FBgn0036298, nst, nesthocker, [RH, Score=496, Expect=1e-170]} {Celegans: WBGene00009006, F21D5.1, Phosphoacetylglucosamine mutase, [RH, Score=371, Expect=7e-122]} {Smed: dd_Smed_v6_8460_0_1, dd_Smed_v6_8460_0_1, [RH, Score=404, Expect=5e-135]} {RNA1509_4528} {RNA1310_5373.1, RNA1509_4528} {RNA1509_4528, RNA815_4728}

Cumulative graph for MligTC455_42269

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.169 4.76 0.06933 0.59150
RegionR2 -0.108 4.76 0.79862 1.00000
RegionR3 0.052 4.76 0.87576 1.00000
RegionR4 0.154 4.76 0.68021 0.97469
RegionR5 0.618 4.76 0.03433 0.14270
RegionR6 0.222 4.76 0.51322 1.00000
RegionR7 0.561 4.76 0.16739 0.75308
RegionR8 0.671 4.76 0.17303 0.74973

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.876 4.76 0.71664 1.00000
RegenerationR2 0.177 4.76 0.56289 0.90033
RegenerationR3 0.684 4.76 0.03907 0.34791
RegenerationR4 0.429 4.76 0.20025 0.64640
RegenerationR5 -0.009 4.76 0.97643 1.00000
RegenerationR6 0.589 4.76 0.07684 0.34639
RegenerationBL -0.361 4.76 0.37044 0.73889
RegenerationTP -0.598 4.76 0.17292 0.60558


Genes with expression patterns similar to MligTC455_42269

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_42269 1072 22.34 Mlig455_050498

Neo: -

Age: -

PGM3 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_050498 {REF} {Length: 2022} {TRANSSPLICED} {Pfam: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I [PF02878.18, score=52.1]; Phosphoglucomutase/phosphomannomutase, C-terminal domain [PF00408.22, score=46.8]; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III [PF02880.18, score=26.5]} {Human: ENSG00000013375, PGM3, phosphoglucomutase 3, [RH, Score=469, Expect=7e-160]} {Mouse: ENSMUSG00000056131, Pgm3, phosphoglucomutase 3, [RH, Score=471, Expect=9e-161]} {Dmel: FBgn0036298, nst, nesthocker, [RH, Score=496, Expect=1e-170]} {Celegans: WBGene00009006, F21D5.1, Phosphoacetylglucosamine mutase, [RH, Score=371, Expect=7e-122]} {Smed: dd_Smed_v6_8460_0_1, dd_Smed_v6_8460_0_1, [RH, Score=404, Expect=5e-135]} {RNA1509_4528} {RNA1310_5373.1, RNA1509_4528} {RNA1509_4528, RNA815_4728}
2. MligTC455_47163 1133 23.6 Mlig455_064953, Mlig455_066833

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.104

Region-enriched R4: 1.456/0.00037

RAI1 1.725 - - - 0.760 0.965 -

Mlig455_064953 {REF} {Length: 1972} {Pfam: PHD-like zinc-binding domain [PF13771.8, score=42.5]; PHD-zinc-finger like domain [PF13832.8, score=35.3]} {Human: ENSG00000108557, RAI1, retinoic acid induced 1, [RH, Score=64.7, Expect=7e-11]; ENSG00000281897, TCF20, transcription factor 20, [RH, Score=64.3, Expect=1e-10]; ENSG00000280467, TCF20, transcription factor 20, [RH, Score=64.3, Expect=1e-10]; ENSG00000276461, TCF20, transcription factor 20, [RH, Score=64.3, Expect=1e-10]; ENSG00000283026, TCF20, transcription factor 20, [RH, Score=64.3, Expect=1e-10]; ENSG00000283681, TCF20, transcription factor 20, [RH, Score=64.3, Expect=1e-10]; ENSG00000100207, TCF20, transcription factor 20, [RH, Score=64.3, Expect=1e-10]; ENSG00000282892, TCF20, transcription factor 20, [RH, Score=64.3, Expect=1e-10]; ENSG00000262024, TCF20, transcription factor 20, [RH, Score=64.3, Expect=1e-10]} {Mouse: ENSMUSG00000071262, Zfp957, zinc finger protein 957, [RH, Score=70.9, Expect=4e-13]} {Dmel: FBgn0034300, CG5098, [RH, Score=72.8, Expect=9e-14]} {Celegans: WBGene00008488, F01D4.5, [Score=47.0, Expect=4e-06]} {Smed: dd_Smed_v6_14031_0_1, dd_Smed_v6_14031_0_1, [RH, Score=93.2, Expect=4e-21]} {RNA1509_4649} {RNA1310_22087.1} {RNA815_29214}

Mlig455_066833 {REF} {Length: 1066} {TRANSSPLICED} {Pfam: PHD-like zinc-binding domain [PF13771.8, score=42.5]; PHD-zinc-finger like domain [PF13832.8, score=35.3]} {Human: ENSG00000108557, RAI1, retinoic acid induced 1, [RH, Score=64.7, Expect=7e-11]; ENSG00000281897, TCF20, transcription factor 20, [RH, Score=64.3, Expect=1e-10]; ENSG00000280467, TCF20, transcription factor 20, [RH, Score=64.3, Expect=1e-10]; ENSG00000276461, TCF20, transcription factor 20, [RH, Score=64.3, Expect=1e-10]; ENSG00000283026, TCF20, transcription factor 20, [RH, Score=64.3, Expect=1e-10]; ENSG00000283681, TCF20, transcription factor 20, [RH, Score=64.3, Expect=1e-10]; ENSG00000100207, TCF20, transcription factor 20, [RH, Score=64.3, Expect=1e-10]; ENSG00000282892, TCF20, transcription factor 20, [RH, Score=64.3, Expect=1e-10]; ENSG00000262024, TCF20, transcription factor 20, [RH, Score=64.3, Expect=1e-10]} {Mouse: ENSMUSG00000071262, Zfp957, zinc finger protein 957, [RH, Score=70.9, Expect=4e-13]} {Dmel: FBgn0034300, CG5098, [RH, Score=72.8, Expect=9e-14]} {Celegans: WBGene00008488, F01D4.5, [Score=47.0, Expect=4e-06]} {Smed: dd_Smed_v6_14031_0_1, dd_Smed_v6_14031_0_1, [RH, Score=93.2, Expect=4e-21]} {RNA1509_4649} {RNA1310_22087.1} {RNA815_29214}
3. MligTC455_50625 599 12.48 Mlig455_054033

Neo: -

Age: -

1.704 - - 0.743 0.961 - - Mlig455_054033 {REF} {Length: 743} {TRANSSPLICED} {RNA1509_38253} {RNA1310_44853} {RNA815_23204}
4. MligTC455_46019 1165 24.26 Mlig455_055584

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.395

RRP8 0.979 - - - 0.979 - - Mlig455_055584 {REF} {Length: 1087} {Pfam: Hypothetical methyltransferase [PF05148.17, score=214.5]; Methyltransferase domain [PF08241.14, score=20.8]} {Human: ENSG00000132275, RRP8, ribosomal RNA processing 8, [RH, Score=177, Expect=3e-51]} {Mouse: ENSMUSG00000030888, Rrp8, ribosomal RNA processing 8, methyltransferase, homolog (yeast), [RH, Score=182, Expect=3e-53]} {Dmel: FBgn0034422, CG7137, [RH, Score=152, Expect=5e-43]} {Celegans: WBGene00020296, T07A9.8, Ribosomal RNA-processing protein 8, [RH, Score=175, Expect=3e-52]} {Smed: dd_Smed_v6_11164_0_1, dd_Smed_v6_11164_0_1, [RH, Score=163, Expect=2e-48]} {RNA1509_28448} {RNA1310_32382} {RNA815_14841}
5. MligTC455_41409 1100 22.91 Mlig455_020530

Neo: -

Age: -

0.975 - - - 0.975 - - Mlig455_020530 {REF} {Length: 4478} {RNA1509_11871} {RNA1310_5093} {RNA815_7109}
6. MligTC455_15362 1658 34.55 Mlig455_041011, Mlig455_041120

Neo: -

Age: -

XIAP 0.972 - - - 0.972 - -

Mlig455_041011 {REF} {Length: 2533} {Pfam: Inhibitor of Apoptosis domain [PF00653.23, score=49.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=46.0]} {Human: ENSG00000101966, XIAP, X-linked inhibitor of apoptosis, [Score=97.8, Expect=9e-21]} {Mouse: ENSMUSG00000025860, Xiap, X-linked inhibitor of apoptosis, [Score=97.1, Expect=1e-20]} {Dmel: FBgn0015247, Diap2, Death-associated inhibitor of apoptosis 2, [Score=101, Expect=3e-22]} {Celegans: WBGene00017342, F10D7.5, [Score=52.0, Expect=9e-07]} {Smed: dd_Smed_v6_10841_0_1, dd_Smed_v6_10841_0_1, [Score=58.2, Expect=1e-08]} {RNA1509_10871} {RNA1310_8653, RNA1509_10871} {RNA1509_10871, RNA815_3125}

Mlig455_041120 {REF} {Length: 2536} {Pfam: Inhibitor of Apoptosis domain [PF00653.23, score=46.9]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=46.0]} {Human: ENSG00000101966, XIAP, X-linked inhibitor of apoptosis, [Score=97.4, Expect=1e-20]; ENSG00000163098, BIRC8, baculoviral IAP repeat containing 8, [Score=92.8, Expect=1e-20]} {Mouse: ENSMUSG00000025860, Xiap, X-linked inhibitor of apoptosis, [Score=99.8, Expect=1e-21]} {Dmel: FBgn0015247, Diap2, Death-associated inhibitor of apoptosis 2, [Score=100, Expect=4e-22]} {Celegans: WBGene00017342, F10D7.5, [Score=52.0, Expect=9e-07]} {Smed: dd_Smed_v6_10841_0_1, dd_Smed_v6_10841_0_1, [Score=58.2, Expect=1e-08]} {RNA1509_43311, RNA1509_6070} {RNA1310_8417, RNA1509_43311, RNA1509_6070} {RNA1509_43311, RNA1509_6070, RNA815_3125}
7. MligTC455_51505 806 16.78 Mlig455_030147

Neo: -

Age: logFC(26M/2M)=-0.256

DTX3L 0.972 - - - 0.972 - - Mlig455_030147 {REF} {Length: 3045} {Pfam: Deltex C-terminal domain [PF18102.3, score=135.2]} {Human: ENSG00000163840, DTX3L, deltex E3 ubiquitin ligase 3L, [Score=128, Expect=4e-30]; ENSG00000178498, DTX3, deltex E3 ubiquitin ligase 3, [Score=128, Expect=7e-32]} {Mouse: ENSMUSG00000040415, Dtx3, deltex 3, E3 ubiquitin ligase, [Score=129, Expect=2e-32]; ENSMUSG00000049502, Dtx3l, deltex 3-like, E3 ubiquitin ligase, [Score=129, Expect=1e-30]} {Dmel: FBgn0000524, dx, deltex, [Score=79.0, Expect=7e-15]} {RNA1509_27510, RNA1509_5594} {RNA1310_5119.1, RNA1509_27510, RNA1509_5594} {RNA1509_27510, RNA1509_5594, RNA815_4008}
8. MligTC455_48326 2328 48.51 Mlig455_016492

Neo: Int S/G2/M

Age: logFC(26M/2M)=1.013

Regeneration-enriched BL: 1.725
Regeneration-enriched R6: 1.385

EIF2S3B 0.969 - - - 0.969 - - Mlig455_016492 {REF} {Length: 2643} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=78.9]; Initiation factor eIF2 gamma, C terminal [PF09173.13, score=73.2]; Elongation factor Tu domain 2 [PF03144.27, score=45.3]} {Human: ENSG00000180574, EIF2S3B, eukaryotic translation initiation factor 2 subunit gamma B, [RH, Score=686, Expect=0.0]} {Mouse: ENSMUSG00000069049, Eif2s3y, eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked, [Score=701, Expect=0.0]; ENSMUSG00000035150, Eif2s3x, eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked, [Score=697, Expect=0.0]} {Dmel: FBgn0263740, eIF2gamma, eukaryotic translation initiation factor 2 subunit gamma, [Score=677, Expect=0.0]} {Celegans: WBGene00021466, eif-2gamma, Eukaryotic Initiation Factor, [RH, Score=677, Expect=0.0]} {Smed: dd_Smed_v6_980_0_1, dd_Smed_v6_980_0_1, [Score=634, Expect=0.0]} {RNA1509_3210} {RNA1310_16815.1} {RNA815_7319}
9. MligTC455_48327 2347 48.9 Mlig455_046907

Neo: -

Age: Up-Down-Up

Regeneration-enriched BL: 1.482
Regeneration-enriched R6: 1.344

EIF2S3 0.966 - - - 0.966 - - Mlig455_046907 {REF} {Length: 2665} {TRANSSPLICED} {Pfam: Initiation factor eIF2 gamma, C terminal [PF09173.13, score=114.6]; Elongation factor Tu GTP binding domain [PF00009.29, score=78.7]; Elongation factor Tu domain 2 [PF03144.27, score=44.1]} {Human: ENSG00000130741, EIF2S3, eukaryotic translation initiation factor 2 subunit gamma, [RH, Score=741, Expect=0.0]; ENSG00000180574, EIF2S3B, eukaryotic translation initiation factor 2 subunit gamma B, [RH, Score=736, Expect=0.0]} {Mouse: ENSMUSG00000069049, Eif2s3y, eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked, [RH, Score=745, Expect=0.0]; ENSMUSG00000035150, Eif2s3x, eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked, [RH, Score=741, Expect=0.0]} {Dmel: FBgn0263740, eIF2gamma, eukaryotic translation initiation factor 2 subunit gamma, [RH, Score=713, Expect=0.0]} {Celegans: WBGene00021466, eif-2gamma, Eukaryotic Initiation Factor, [RH, Score=712, Expect=0.0]} {Smed: dd_Smed_v6_980_0_1, dd_Smed_v6_980_0_1, [RH, Score=678, Expect=0.0]} {RNA1509_13308, RNA1509_3210, RNA1509_32670, RNA1509_43746, RNA1509_58895} {RNA1310_16815.1, RNA1509_13308, RNA1509_3210, RNA1509_32670, RNA1509_43746, RNA1509_58895} {RNA1509_13308, RNA1509_3210, RNA1509_32670, RNA1509_43746, RNA1509_58895, RNA815_7319}
10. MligTC455_43859 143 2.97 Mlig455_005631

Neo: -

Age: -

HDAC6 0.963 - - - - 0.963 - Mlig455_005631 {REF} {Length: 3221} {TRANSSPLICED} {Pfam: Histone deacetylase domain [PF00850.21, score=579.5]; Zn-finger in ubiquitin-hydrolases and other protein [PF02148.21, score=63.7]} {Human: ENSG00000094631, HDAC6, histone deacetylase 6, [RH, Score=566, Expect=0.0]} {Mouse: ENSMUSG00000031161, Hdac6, histone deacetylase 6, [RH, Score=622, Expect=0.0]} {Dmel: FBgn0026428, HDAC6, Histone deacetylase 6, [RH, Score=733, Expect=0.0]} {Celegans: WBGene00018319, hda-6, Histone deacetylase 6, [RH, Score=573, Expect=0.0]} {Smed: dd_Smed_v6_1997_0_1, dd_Smed_v6_1997_0_1, [RH, Score=759, Expect=0.0]} {RNA1509_45359} {RNA1310_4724.1} {RNA815_1890}
11. MligTC455_44230 2968 61.83 Mlig455_010488, Mlig455_061892

Neo: -

Age: -

0.961 - - - 0.961 - -

Mlig455_010488 {REF} {Length: 2026} {TRANSSPLICED} {RNA1509_10432} {RNA1310_29941} {RNA815_15146}

Mlig455_061892 {REF} {Length: 2024} {TRANSSPLICED} {RNA1509_10432} {RNA1310_29941} {RNA815_15146}
12. MligTC455_25222 492 10.24 Mlig455_022084

Neo: -

Age: -

Region-enriched R5: 1.764/0.01644

ESF1 0.958 - - - 0.958 - - Mlig455_022084 {REF} {Length: 2312} {TRANSSPLICED} {Pfam: NUC153 domain [PF08159.14, score=42.1]; CDC45-like protein [PF02724.16, score=24.5]; Nop14-like family [PF04147.14, score=20.6]; SDA1 [PF05285.14, score=20.6]} {Human: ENSG00000089048, ESF1, ESF1 nucleolar pre-rRNA processing protein homolog, [RH, Score=139, Expect=5e-34]} {Mouse: ENSMUSG00000045624, Esf1, ESF1 nucleolar pre-rRNA processing protein homolog, [RH, Score=142, Expect=4e-35]} {Dmel: FBgn0024364, CG11417, [RH, Score=181, Expect=2e-48]} {Celegans: WBGene00010231, F58B3.4, [RH, Score=112, Expect=6e-26]} {Smed: dd_Smed_v6_12089_0_1, dd_Smed_v6_12089_0_1, [RH, Score=71.2, Expect=5e-13]} {RNA1509_9930} {RNA1310_10403, RNA1509_9930} {RNA1509_9930, RNA815_3468}
13. MligTC455_17979 584 12.17 Mlig455_002788

Neo: Germline

Age: -

HORMAD2 0.954 - - - - 0.954 - Mlig455_002788 {REF} {Length: 2581} {TRANSSPLICED} {Pfam: HORMA domain [PF02301.20, score=145.8]; PHD-finger [PF00628.31, score=24.0]; MarR family [PF12802.9, score=20.4]} {Human: ENSG00000176635, HORMAD2, HORMA domain containing 2, [RH, Score=135, Expect=4e-35]; ENSG00000143452, HORMAD1, HORMA domain containing 1, [RH, Score=131, Expect=7e-33]} {Mouse: ENSMUSG00000020419, Hormad2, HORMA domain containing 2, [RH, Score=140, Expect=5e-37]} {Smed: dd_Smed_v6_2201_0_7, dd_Smed_v6_2201_0_7, [RH, Score=295, Expect=3e-93]} {RNA1509_21153} {RNA1310_11386.1, RNA1509_21153} {RNA1509_21153, RNA815_9879}
14. MligTC455_45638 2531 52.72 Mlig455_029644

Neo: -

Age: Down-Down-Up

DLG1 0.954 - - - 0.954 - - Mlig455_029644 {REF} {Length: 2058} {TRANSSPLICED} {Pfam: Guanylate kinase [PF00625.23, score=201.1]; PDZ domain [PF00595.26, score=68.8]; PDZ domain [PF17820.3, score=26.5]; SH3 domain [PF00018.30, score=26.4]; Variant SH3 domain [PF07653.19, score=24.1]} {Human: ENSG00000075711, DLG1, discs large MAGUK scaffold protein 1, [RH, Score=516, Expect=2e-174]} {Mouse: ENSMUSG00000022770, Dlg1, discs large MAGUK scaffold protein 1, [RH, Score=513, Expect=7e-173]} {Dmel: FBgn0001624, dlg1, discs large 1, [RH, Score=540, Expect=0.0]} {Celegans: WBGene00001006, dlg-1, Drosophila Discs LarGe homolog; MAGUK protein DLG-1; SAP97-like protein DLG-1, [Score=385, Expect=2e-123]} {Smed: dd_Smed_v6_8511_0_1, dd_Smed_v6_8511_0_1, [Score=352, Expect=1e-115]} {RNA1509_15416, RNA1509_25751, RNA1509_41994, RNA1509_6874} {RNA1310_21812.1, RNA1509_15416, RNA1509_25751, RNA1509_41994, RNA1509_6874} {RNA1509_15416, RNA1509_25751, RNA1509_41994, RNA1509_6874, RNA815_12065.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA