TomoSeq data search

Data search

Results for MligTC455_42280

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_42280	94	1.97	Mlig455_041193	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.435	TRPM3	Mlig455_041193 {REF} {Length: 7407} {Pfam: Ion transport protein [PF00520.33, score=31.5]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=79.0, Expect=4e-15]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=77.4, Expect=8e-15]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=73.6, Expect=2e-13]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=63.2, Expect=2e-10]} {Smed: dd_Smed_v6_10717_0_1, dd_Smed_v6_10717_0_1, [Score=92.8, Expect=3e-20]} {RNA1509_12642, RNA1509_36300} {RNA1310_1902.1, RNA1509_36300} {RNA1509_36300, RNA815_2248.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42280

1.97

Mlig455_041193

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.435

TRPM3

Mlig455_041193 {REF} {Length: 7407} {Pfam: Ion transport protein [PF00520.33, score=31.5]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=79.0, Expect=4e-15]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=77.4, Expect=8e-15]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=73.6, Expect=2e-13]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=63.2, Expect=2e-10]} {Smed: dd_Smed_v6_10717_0_1, dd_Smed_v6_10717_0_1, [Score=92.8, Expect=3e-20]} {RNA1509_12642, RNA1509_36300} {RNA1310_1902.1, RNA1509_36300} {RNA1509_36300, RNA815_2248.1}

Cumulative graph for MligTC455_42280

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.824	1.783	0.21941	0.86214
RegionR2	1.036	1.783	0.45952	0.84676
RegionR3	1.423	1.783	0.23930	0.78060
RegionR4	0.656	1.783	0.61132	0.92238
RegionR5	0.659	1.783	0.56805	0.92698
RegionR6	1.915	1.783	0.10310	0.58943
RegionR7	-0.109	1.783	0.89837	1.00000
RegionR8	0.245	1.783	0.82426	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.189	1.783	0.99996	1.00000
RegenerationR2	-0.975	1.783	0.37864	0.80064
RegenerationR3	-1.401	1.783	0.22725	0.66252
RegenerationR4	-0.894	1.783	0.46015	0.84735
RegenerationR5	-1.703	1.783	0.17208	0.60067
RegenerationR6	-1.025	1.783	0.35013	0.69519
RegenerationBL	0.805	1.783	0.48697	0.85211
RegenerationTP	-0.461	1.783	0.77360	1.00000

Genes with expression patterns similar to MligTC455_42280

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42280	94	1.97	Mlig455_041193	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.435	TRPM3	5	1.000	1.000	1.000	1.000	1.000	-	Mlig455_041193 {REF} {Length: 7407} {Pfam: Ion transport protein [PF00520.33, score=31.5]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=79.0, Expect=4e-15]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=77.4, Expect=8e-15]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=73.6, Expect=2e-13]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=63.2, Expect=2e-10]} {Smed: dd_Smed_v6_10717_0_1, dd_Smed_v6_10717_0_1, [Score=92.8, Expect=3e-20]} {RNA1509_12642, RNA1509_36300} {RNA1310_1902.1, RNA1509_36300} {RNA1509_36300, RNA815_2248.1}
2.	MligTC455_33658	23544	490.49	Mlig455_002877	Neo: - Age: logFC(26M/2M)=-0.222 Region-enriched R3: 1.102/0.04082 Regeneration-upregulated BL: 2.255 Regeneration-enriched BL: 2.255		0.974	-	-	-	-	0.974	-	Mlig455_002877 {REF} {Length: 966} {Pfam: Translocon-associated protein (TRAP), alpha subunit [PF03896.18, score=22.7]} {RNA1509_28054, RNA1509_3135, RNA1509_33789, RNA1509_35376, RNA1509_56828} {RNA1310_48375, RNA1509_28054, RNA1509_3135, RNA1509_35376, RNA1509_56828} {RNA1509_28054, RNA1509_3135, RNA1509_35376, RNA1509_56828, RNA815_14838.1}
3.	MligTC455_31145	244	5.09	Mlig455_016670, Mlig455_056357	Neo: - Age: - Region-enriched R8: 3.415/0.00478		0.972	-	-	0.972	-	-	-	Mlig455_016670 {REF} {Length: 2972} {RNA1509_46776} {RNA1310_10756} {RNA815_21244} Mlig455_056357 {REF} {Length: 1716} {RNA1509_46776} {RNA1310_10756} {RNA815_21244}
4.	MligTC455_42747	160	3.33	Mlig455_024388, Mlig455_024501	Neo: - Age: -		0.959	-	-	0.959	-	-	-	Mlig455_024388 {REF} {Length: 758} {Smed: dd_Smed_v6_512_0_1, dd_Smed_v6_512_0_1, [Score=44.3, Expect=7e-07]} {RNA1310_50230} Mlig455_024501 {REF} {Length: 859} {Smed: dd_Smed_v6_512_0_2, dd_Smed_v6_512_0_2, [Score=44.7, Expect=3e-07]} {RNA1310_50230}