TomoSeq data search

Data search

Results for MligTC455_42299

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42299

9

0.18

Mlig455_003239

Neo: -

Age: -

BAP1

Mlig455_003239 {REF} {Length: 4100} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase, family 1 [PF01088.23, score=186.3]; SprT-like family [PF10263.11, score=85.6]; Ubiquitin carboxyl-terminal hydrolases [PF18031.3, score=39.5]; SprT-like zinc ribbon domain [PF17283.4, score=20.7]} {Human: ENSG00000163930, BAP1, BRCA1 associated protein 1, [RH, Score=230, Expect=7e-63]} {Mouse: ENSMUSG00000021901, Bap1, Brca1 associated protein 1, [RH, Score=229, Expect=1e-62]} {Dmel: FBgn0262166, calypso, [RH, Score=220, Expect=4e-62]} {Celegans: WBGene00022694, gcna-1, Germ Cell Nuclear Antigen, [Score=116, Expect=1e-26]} {Smed: dd_Smed_v6_4235_0_1, dd_Smed_v6_4235_0_1, [RH, Score=236, Expect=3e-66]} {RNA1509_13894} {RNA1310_11162} {RNA815_2049}

Cumulative graph for MligTC455_42299

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_42299

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42299	9	0.18	Mlig455_003239	Neo: - Age: -	BAP1	1	-	-	-	-	1.000	-	Mlig455_003239 {REF} {Length: 4100} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase, family 1 [PF01088.23, score=186.3]; SprT-like family [PF10263.11, score=85.6]; Ubiquitin carboxyl-terminal hydrolases [PF18031.3, score=39.5]; SprT-like zinc ribbon domain [PF17283.4, score=20.7]} {Human: ENSG00000163930, BAP1, BRCA1 associated protein 1, [RH, Score=230, Expect=7e-63]} {Mouse: ENSMUSG00000021901, Bap1, Brca1 associated protein 1, [RH, Score=229, Expect=1e-62]} {Dmel: FBgn0262166, calypso, [RH, Score=220, Expect=4e-62]} {Celegans: WBGene00022694, gcna-1, Germ Cell Nuclear Antigen, [Score=116, Expect=1e-26]} {Smed: dd_Smed_v6_4235_0_1, dd_Smed_v6_4235_0_1, [RH, Score=236, Expect=3e-66]} {RNA1509_13894} {RNA1310_11162} {RNA815_2049}
2.	MligTC455_42298	18	0.37	Mlig455_003033	Neo: - Age: -	BAP1	0.969	-	-	-	-	0.969	-	Mlig455_003033 {REF} {Length: 5648} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase, family 1 [PF01088.23, score=185.1]; SprT-like family [PF10263.11, score=85.7]; Ubiquitin carboxyl-terminal hydrolases [PF18031.3, score=39.5]; SprT-like zinc ribbon domain [PF17283.4, score=20.7]} {Human: ENSG00000163930, BAP1, BRCA1 associated protein 1, [RH, Score=230, Expect=8e-63]} {Mouse: ENSMUSG00000021901, Bap1, Brca1 associated protein 1, [RH, Score=229, Expect=1e-62]} {Dmel: FBgn0262166, calypso, [RH, Score=220, Expect=5e-62]} {Celegans: WBGene00022694, gcna-1, Germ Cell Nuclear Antigen, [Score=116, Expect=1e-26]} {Smed: dd_Smed_v6_4235_0_1, dd_Smed_v6_4235_0_1, [RH, Score=232, Expect=6e-65]} {RNA1509_13894, RNA1509_47710} {RNA1310_11162, RNA1509_47710} {RNA1509_47710, RNA815_2049}
3.	MligTC455_26105	77	1.61	Mlig455_009361	Neo: - Age: logFC(26M/2M)=-0.384		0.968	-	-	-	-	0.968	-	Mlig455_009361 {REF} {Length: 3566} {RNA1509_41127} {RNA1310_28777.1} {RNA815_5881.1}
4.	MligTC455_40720	27	0.56	Mlig455_028115	Neo: - Age: -	CHAF1A	0.956	-	-	-	-	0.956	-	Mlig455_028115 {REF} {Length: 1442} {Pfam: Chromatin assembly factor 1 subunit A [PF12253.10, score=88.9]} {Human: ENSG00000167670, CHAF1A, chromatin assembly factor 1 subunit A, [RH, Score=102, Expect=2e-22]} {Mouse: ENSMUSG00000002835, Chaf1a, chromatin assembly factor 1, subunit A (p150), [RH, Score=87.8, Expect=6e-18]} {Dmel: FBgn0030054, Caf1-180, Chromatin assembly factor 1, p180 subunit, [RH, Score=119, Expect=3e-28]} {Celegans: WBGene00011532, chaf-1, CHromatin Assembly Factor, [Score=57.8, Expect=8e-09]} {Smed: dd_Smed_v6_8919_0_1, dd_Smed_v6_8919_0_1, [RH, Score=100, Expect=2e-22]} {RNA1509_45107} {RNA1310_19084.1} {RNA815_2066}
5.	MligTC455_40262	46	0.95	Mlig455_010972	Neo: - Age: -	TJP1	0.953	-	-	-	-	0.953	-	Mlig455_010972 {REF} {Length: 3607} {Pfam: PDZ domain [PF00595.26, score=58.3]; PDZ domain [PF17820.3, score=35.4]; PDZ domain [PF13180.8, score=24.9]; ZU5 domain [PF00791.22, score=20.8]} {Human: ENSG00000104067, TJP1, tight junction protein 1, [Score=71.2, Expect=5e-12]; ENSG00000277401, TJP1, tight junction protein 1, [Score=71.2, Expect=5e-12]} {Mouse: ENSMUSG00000030516, Tjp1, tight junction protein 1, [Score=72.4, Expect=1e-12]} {Dmel: FBgn0032363, Dlg5, Discs large 5, [Score=78.2, Expect=2e-14]} {Celegans: WBGene00013683, zoo-1, ZO-1 (Zonula Occludens tight junctional protein) Ortholog, [Score=74.3, Expect=2e-13]} {RNA1310_34445}
6.	MligTC455_02086	11	0.22	Mlig455_023372	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_023372 {REF} {Length: 1600} {Pfam: Mucin-like [PF16058.7, score=21.8]} {RNA1509_51296} {RNA1310_7014} {RNA815_19140}
7.	MligTC455_57076	11	0.22	Mlig455_047021	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_047021 {REF} {Length: 684} {RNA1509_51296} {RNA1310_7014} {RNA815_19140}
8.	MligTC455_35646	8	0.17	Mlig455_037103	Neo: - Age: -	CALR	0.95	-	-	-	-	0.950	-	Mlig455_037103 {REF} {Length: 1367} {Pfam: Calreticulin family [PF00262.20, score=90.2]} {Human: ENSG00000179218, CALR, calreticulin, [Score=129, Expect=7e-37]} {Mouse: ENSMUSG00000003814, Calr, calreticulin, [Score=124, Expect=2e-35]} {Dmel: FBgn0005585, Calr, Calreticulin, [Score=125, Expect=1e-35]} {Celegans: WBGene00000802, crt-1, Calreticulin, [Score=138, Expect=5e-41]} {Smed: dd_Smed_v6_220_0_4, dd_Smed_v6_220_0_4, [Score=136, Expect=3e-40]} {RNA1509_25527} {RNA1310_7861.3} {RNA815_3522.2}

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