Data search
Results for MligTC455_42311
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42311 | 789 | 16.43 | Mlig455_051952 | Neo: - Age: logFC(26M/2M)=-0.349 |
ATRAID | Mlig455_051952 {REF} {Length: 1611} {TRANSSPLICED} {Human: ENSG00000138085, ATRAID, all-trans retinoic acid induced differentiation factor, [RH, Score=68.2, Expect=2e-13]} {Mouse: ENSMUSG00000013622, Atraid, all-trans retinoic acid induced differentiation factor, [RH, Score=70.9, Expect=3e-14]} {RNA1509_28632, RNA1509_46678} {RNA1310_20798, RNA1509_28632, RNA1509_46678} {RNA1509_28632, RNA1509_46678, RNA815_9947} |
Cumulative graph for MligTC455_42311
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.98 | 4.368 | 0.03966 | 0.48488 | |
| RegionR2 | 0.232 | 4.368 | 0.74669 | 1.00000 | |
| RegionR3 | 1.197 | 4.368 | 0.07433 | 0.48318 | |
| RegionR4 | 1.154 | 4.368 | 0.13861 | 0.37961 | |
| RegionR5 | 0.949 | 4.368 | 0.18792 | 0.47007 | |
| RegionR6 | 1.095 | 4.368 | 0.12291 | 0.63892 | |
| RegionR7 | 0.957 | 4.368 | 0.26318 | 0.89175 | |
| RegionR8 | 1.396 | 4.368 | 0.09815 | 0.58988 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 6.014 | 4.368 | 0.20925 | 0.94839 | |
| RegenerationR2 | 0.46 | 4.368 | 0.30384 | 0.74469 | |
| RegenerationR3 | 0.021 | 4.368 | 0.96384 | 1.00000 | |
| RegenerationR4 | 0.052 | 4.368 | 0.91069 | 1.00000 | |
| RegenerationR5 | 0.83 | 4.368 | 0.05409 | 0.37349 | |
| RegenerationR6 | 0.327 | 4.368 | 0.48057 | 0.79222 | |
| RegenerationBL | 0.578 | 4.368 | 0.23751 | 0.59087 | |
| RegenerationTP | 0.649 | 4.368 | 0.21423 | 0.65712 |
Genes with expression patterns similar to MligTC455_42311
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42311 | 789 | 16.43 | Mlig455_051952 | Neo: - Age: logFC(26M/2M)=-0.349 |
ATRAID | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_051952 {REF} {Length: 1611} {TRANSSPLICED} {Human: ENSG00000138085, ATRAID, all-trans retinoic acid induced differentiation factor, [RH, Score=68.2, Expect=2e-13]} {Mouse: ENSMUSG00000013622, Atraid, all-trans retinoic acid induced differentiation factor, [RH, Score=70.9, Expect=3e-14]} {RNA1509_28632, RNA1509_46678} {RNA1310_20798, RNA1509_28632, RNA1509_46678} {RNA1509_28632, RNA1509_46678, RNA815_9947} |
| 2. | MligTC455_38964 | 433 | 9.02 | Mlig455_049691 | Neo: Int S/G2/M Age: Down-Up-Down |
SRSF11 | 0.961 | - | - | - | 0.961 | - | - | Mlig455_049691 {REF} {Length: 4541} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=31.1]} {Human: ENSG00000116754, SRSF11, serine and arginine rich splicing factor 11, [RH, Score=99.4, Expect=2e-21]} {Mouse: ENSMUSG00000032621, Srek1, splicing regulatory glutamine/lysine-rich protein 1, [Score=165, Expect=1e-43]} {Dmel: FBgn0024285, Srp54, [RH, Score=156, Expect=5e-41]} {Celegans: WBGene00004704, rsp-7, Probable splicing factor, arginine/serine-rich 7, [Score=105, Expect=4e-24]} {Smed: dd_Smed_v6_5957_0_1, dd_Smed_v6_5957_0_1, [RH, Score=145, Expect=4e-40]} {RNA1509_27257, RNA1509_48641} {RNA1310_15393, RNA1509_27257, RNA1509_48641} {RNA1509_27257, RNA1509_48641, RNA815_14196} |
| 3. | MligTC455_22494 | 355 | 7.4 | Mlig455_021564 | Neo: - Age: - Region-enriched R5: 2.022/0.00412 |
0.951 | - | - | 0.951 | - | - | - | Mlig455_021564 {REF} {Length: 1307} {NoTransDecoderORF} {RNA1509_57748} {RNA1310_29874.1} {RNA815_10307} | |
| 4. | MligTC455_43937 | 586 | 12.2 | Mlig455_063114 | Neo: Irradiation Age: Down-Up-Up Region-enriched R5: 2.197/0.00001 |
0.95 | - | - | 0.950 | - | - | - | Mlig455_063114 {REF} {Length: 2393} {RNA1509_7216} {RNA1310_10758.1} {RNA815_5923} |
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