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Results for MligTC455_42315

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_42315 147 3.06 Mlig455_047352

Neo: -

Age: Up-Down-Up

 Mlig455_047352 {REF} {Length: 1453} {Celegans: WBGene00016289, lntl-1, LIN-24 (Twenty-four) Like, [Score=75.1, Expect=2e-15]} {RNA1509_20174} {RNA1310_21743} {RNA815_10165}

Cumulative graph for MligTC455_42315

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.753 2.123 0.33074 0.97652
RegionR2 0.184 2.123 0.78171 1.00000
RegionR3 -1.115 2.123 0.10823 0.57308
RegionR4 -1.189 2.123 0.15142 0.40219
RegionR5 -2.419 2.123 0.00103 0.01039
RegionR6 0.609 2.123 0.27918 0.86911
RegionR7 1.69 2.123 0.01613 0.23006
RegionR8 0.488 2.123 0.65569 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.156 2.123 0.22705 0.95820
RegenerationR2 0.627 2.123 0.25555 0.70190
RegenerationR3 0.475 2.123 0.55497 0.88617
RegenerationR4 -0.181 2.123 0.85190 1.00000
RegenerationR5 1.51 2.123 0.06526 0.40223
RegenerationR6 -1.018 2.123 0.16839 0.49887
RegenerationBL -1.52 2.123 0.14835 0.46016
RegenerationTP 0.731 2.123 0.36167 0.80171


Genes with expression patterns similar to MligTC455_42315

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_42315 147 3.06 Mlig455_047352

Neo: -

Age: Up-Down-Up

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_047352 {REF} {Length: 1453} {Celegans: WBGene00016289, lntl-1, LIN-24 (Twenty-four) Like, [Score=75.1, Expect=2e-15]} {RNA1509_20174} {RNA1310_21743} {RNA815_10165}
2. MligTC455_34354 1250 26.04 Mlig455_041299, Mlig455_056201

Neo: -

Age: -

Regeneration-downregulated BL: -2.125

Regeneration-depleted BL: -2.125

 DYNLRB2 1.857 - - - - 0.972 0.885

Mlig455_041299 {REF} {Length: 5797} {TRANSSPLICED} {Pfam: Roadblock/LC7 domain [PF03259.19, score=82.2]} {Human: ENSG00000168589, DYNLRB2, dynein light chain roadblock-type 2, [RH, Score=137, Expect=9e-43]} {Mouse: ENSMUSG00000034467, Dynlrb2, dynein light chain roadblock-type 2, [RH, Score=136, Expect=3e-43]} {Dmel: FBgn0024196, robl, roadblock, [RH, Score=135, Expect=5e-43]} {Celegans: WBGene00012004, dyrb-1, Dynein light chain roadblock, [RH, Score=101, Expect=1e-29]} {Smed: dd_Smed_v6_1126_0_1, dd_Smed_v6_1126_0_1, [RH, Score=144, Expect=2e-46]} {RNA1509_28728, RNA1509_41581} {RNA1310_30473, RNA1509_41581} {RNA1509_41581, RNA815_14022}

Mlig455_056201 {REF} {Length: 1126} {TRANSSPLICED} {Pfam: Roadblock/LC7 domain [PF03259.19, score=82.2]} {Human: ENSG00000168589, DYNLRB2, dynein light chain roadblock-type 2, [RH, Score=137, Expect=9e-43]} {Mouse: ENSMUSG00000034467, Dynlrb2, dynein light chain roadblock-type 2, [RH, Score=136, Expect=3e-43]} {Dmel: FBgn0024196, robl, roadblock, [RH, Score=135, Expect=5e-43]} {Celegans: WBGene00012004, dyrb-1, Dynein light chain roadblock, [RH, Score=101, Expect=1e-29]} {Smed: dd_Smed_v6_1126_0_1, dd_Smed_v6_1126_0_1, [RH, Score=144, Expect=2e-46]} {RNA1509_28728} {RNA1310_30473, RNA1509_28728} {RNA1509_28728, RNA815_14022}
3. MligTC455_06013 40 0.84 Mlig455_068436

Neo: -

Age: -

 1.837 - - - - 0.883 0.954 Mlig455_068436 {REF} {Length: 578} {RNA1310_1398} {RNA815_9443}
4. MligTC455_37269 173 3.61 Mlig455_020047

Neo: -

Age: -

 CASP3 1.803 - - - 0.841 - 0.962 Mlig455_020047 {REF} {Length: 2828} {Pfam: Caspase domain [PF00656.24, score=94.7]; Ankyrin repeats (3 copies) [PF12796.9, score=79.1]; Ankyrin repeats (many copies) [PF13857.8, score=62.0]; Ankyrin repeats (many copies) [PF13637.8, score=58.0]; Ankyrin repeat [PF13606.8, score=40.7]; Ankyrin repeat [PF00023.32, score=31.7]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=111, Expect=1e-26]; ENSG00000003400, CASP10, caspase 10, [Score=107, Expect=9e-24]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=106, Expect=5e-25]; ENSMUSG00000025076, Casp7, caspase 7, [Score=106, Expect=7e-25]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [Score=96.3, Expect=2e-21]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=81.6, Expect=9e-17]} {Smed: dd_Smed_v6_10883_0_1, dd_Smed_v6_10883_0_1, [Score=107, Expect=1e-24]} {RNA1509_54818} {RNA1310_7187} {RNA815_8712}
5. MligTC455_31448 183 3.82 Mlig455_033834

Neo: -

Age: -

 1.798 - - 0.972 - 0.826 - Mlig455_033834 {REF} {Length: 2859} {RNA1509_53217} {RNA1310_59954.1} {RNA815_36681.1}
6. MligTC455_49115 61 1.27 Mlig455_069545

Neo: -

Age: -

 1.732 - - - - 0.955 0.777 Mlig455_069545 {REF} {Length: 3069} {RNA1509_57667} {RNA1310_15532} {RNA815_9856}
7. MligTC455_17818 453 9.44 Mlig455_005309

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.498

 GUCA1B 1.708 - - - 0.752 0.956 - Mlig455_005309 {REF} {Length: 953} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=75.0]; EF hand [PF00036.34, score=72.8]; EF-hand domain [PF13405.8, score=61.9]; EF hand [PF13202.8, score=61.2]; EF-hand domain pair [PF13833.8, score=47.4]} {Human: ENSG00000112599, GUCA1B, guanylate cyclase activator 1B, [Score=63.9, Expect=2e-12]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=52.0, Expect=7e-09]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=52.0, Expect=2e-08]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=52.0, Expect=2e-08]; ENSMUSG00000033953, Ppp3r1, protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I), [Score=50.1, Expect=1e-07]; ENSMUSG00000028310, Ppp3r2, protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type II), [Score=50.1, Expect=1e-07]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=50.4, Expect=4e-08]} {Celegans: WBGene00003565, ncs-3, Neuronal Calcium Sensor family, [Score=67.4, Expect=4e-14]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=50.4, Expect=3e-08]} {RNA1509_25226} {RNA1310_34058, RNA1509_25226} {RNA1509_25226, RNA815_15719}
8. MligTC455_47068 69 1.43 Mlig455_060910

Neo: -

Age: -

 1.702 - - 0.748 - 0.954 - Mlig455_060910 {REF} {Length: 1012}
9. MligTC455_09736 84 1.75 Mlig455_006603

Neo: -

Age: -

 0.985 - - - - 0.985 - Mlig455_006603 {REF} {Length: 3772} {NoTransDecoderORF} {RNA1509_45701} {RNA1310_47289} {RNA815_39782}
10. MligTC455_35990 62 1.29 Mlig455_069125

Neo: -

Age: Up-Down-Down

Region-enriched R4: 4.550/0.00866

 0.975 - - - - - 0.975 Mlig455_069125 {REF} {Length: 5594} {Pfam: Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=33.4]; Reverse transcriptase-like [PF13456.8, score=30.9]} {Smed: dd_Smed_v6_17076_0_2, dd_Smed_v6_17076_0_2, [Score=181, Expect=6e-51]} {RNA1509_47541} {RNA1310_49685} {RNA815_36641}
11. MligTC455_36171 63 1.32 Mlig455_004205, Mlig455_004217, Mlig455_018952

Neo: -

Age: -

 0.973 - - - - 0.973 -

Mlig455_004205 {REF} {Length: 6288} {RNA1509_25192} {RNA1310_12769.1} {RNA815_30119}

Mlig455_004217 {REF} {Length: 172} {NoTransDecoderORF} {RNA1310_104512}

Mlig455_018952 {REF} {Length: 201} {NoTransDecoderORF} {RNA1509_49809} {RNA1310_56694.2} {RNA815_21617.1}
12. MligTC455_43135 150 3.13 Mlig455_010595

Neo: -

Age: -

 0.972 - - - - - 0.972 Mlig455_010595 {REF} {Length: 2471} {Pfam: BTB/POZ domain [PF00651.33, score=32.6]} {Celegans: WBGene00018437, btb-8, BTB (Broad/complex/Tramtrack/Bric a brac) domain protein, [RH, Score=51.6, Expect=3e-07]} {RNA1509_23896} {RNA1310_24136, RNA1509_23896} {RNA1509_23896, RNA815_10884}
13. MligTC455_53825 1325 27.6 Mlig455_027684, Mlig455_047743

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.496

 RPS27L 0.97 - - - - 0.970 -

Mlig455_027684 {REF} {Length: 1045} {Pfam: Ribosomal protein S27 [PF01667.19, score=80.1]} {Human: ENSG00000185088, RPS27L, ribosomal protein S27 like, [Score=121, Expect=7e-35]} {Mouse: ENSMUSG00000036781, Rps27l, ribosomal protein S27-like, [Score=119, Expect=4e-34]; ENSMUSG00000090733, Rps27, ribosomal protein S27, [Score=114, Expect=3e-32]; ENSMUSG00000050621, Rps27rt, ribosomal protein S27, retrogene, [Score=114, Expect=3e-32]} {Dmel: FBgn0039300, RpS27, Ribosomal protein S27, [Score=125, Expect=6e-37]} {Celegans: WBGene00004496, rps-27, 40S ribosomal protein S27, [Score=113, Expect=2e-32]} {Smed: dd_Smed_v6_106_0_1, dd_Smed_v6_106_0_1, [Score=113, Expect=2e-32]} {RNA1509_22795} {RNA1310_46720.1} {RNA815_30171.1}

Mlig455_047743 {REF} {Length: 658} {Pfam: Ribosomal protein S27 [PF01667.19, score=83.3]} {Human: ENSG00000185088, RPS27L, ribosomal protein S27 like, [Score=122, Expect=1e-37]} {Mouse: ENSMUSG00000036781, Rps27l, ribosomal protein S27-like, [Score=122, Expect=8e-38]} {Dmel: FBgn0039300, RpS27, Ribosomal protein S27, [Score=126, Expect=7e-40]} {Celegans: WBGene00004496, rps-27, 40S ribosomal protein S27, [Score=115, Expect=2e-35]} {Smed: dd_Smed_v6_106_0_1, dd_Smed_v6_106_0_1, [Score=115, Expect=2e-35]} {RNA1310_46720.1} {RNA815_30171.1}
14. MligTC455_30362 30 0.63 Mlig455_040311

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_040311 {REF} {Length: 424} {NoTransDecoderORF} {RNA1310_130301}
15. MligTC455_06865 658 13.71 Mlig455_028132, Mlig455_028276

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.391

 KCNC1 0.959 - - - 0.959 - -

Mlig455_028132 {REF} {Length: 2953} {Pfam: Ion transport protein [PF00520.33, score=118.6]; BTB/POZ domain [PF02214.24, score=80.7]; Ion channel [PF07885.18, score=39.5]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=281, Expect=8e-86]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=278, Expect=1e-83]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=281, Expect=6e-86]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [Score=272, Expect=1e-81]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=293, Expect=2e-91]} {Celegans: WBGene00008819, shw-1, SHaW family of potassium channels, [Score=296, Expect=3e-91]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [Score=307, Expect=8e-96]} {RNA1509_33421, RNA1509_45695} {RNA1310_6306, RNA1509_33421, RNA1509_45695} {RNA1509_33421, RNA1509_45695, RNA815_9610}

Mlig455_028276 {REF} {Length: 2587} {Pfam: BTB/POZ domain [PF02214.24, score=80.8]; Ion transport protein [PF00520.33, score=77.8]; Ion channel [PF07885.18, score=33.2]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=220, Expect=2e-63]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=220, Expect=2e-63]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=217, Expect=2e-62]} {Celegans: WBGene00008819, shw-1, SHaW family of potassium channels, [Score=220, Expect=2e-64]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [Score=223, Expect=5e-65]} {RNA1509_33421} {RNA1310_6306} {RNA815_9610}
16. MligTC455_11481 34 0.7 Mlig455_039032

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.619

 0.959 - - - - 0.959 - Mlig455_039032 {REF} {Length: 1091} {Pfam: Neurohypophysial hormones, C-terminal Domain [PF00184.19, score=49.2]} {RNA1509_55830} {RNA1310_49297} {RNA815_45968}
17. MligTC455_06864 681 14.19 Mlig455_028070, Mlig455_028277

Neo: -

Age: -

 0.957 - - - 0.957 - -

Mlig455_028070 {REF} {Length: 851} {NoTransDecoderORF} {RNA1509_45695} {RNA1310_6306} {RNA815_16486}

Mlig455_028277 {REF} {Length: 2850} {NoTransDecoderORF} {RNA1509_45695} {RNA1310_6306} {RNA815_16486}
18. MligTC455_28287 44 0.92 Mlig455_008619

Neo: -

Age: Down-Down-Up

 0.957 - - - - 0.957 - Mlig455_008619 {REF} {Length: 3624} {RNA1509_41463} {RNA1310_17510.1} {RNA815_6737}
19. MligTC455_37342 203 4.23 Mlig455_024018

Neo: -

Age: -

 0.957 - - - - - 0.957 Mlig455_024018 {REF} {Length: 1374} {RNA1509_59718} {RNA1310_33285} {RNA815_22262}
20. MligTC455_47650 134 2.79 Mlig455_013873

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_013873 {REF} {Length: 1734} {NoTransDecoderORF} {RNA1509_14875} {RNA1310_4705} {RNA815_23877}
21. MligTC455_41108 96 2.01 Mlig455_002394

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_002394 {REF} {Length: 3247} {RNA1509_50994} {RNA1310_9012.2} {RNA815_31617.1}
22. MligTC455_11071 233 4.86 Mlig455_052294

Neo: -

Age: -

Region-enriched R7: 3.038/0.02239
Region-enriched R2: 2.886/0.04164

 0.951 - - - - 0.951 - Mlig455_052294 {REF} {Length: 354} {NoTransDecoderORF} {RNA1310_51357} {RNA815_24712}
23. MligTC455_31451 167 3.49 Mlig455_029510

Neo: -

Age: -

Region-enriched R2: 2.821/0.00535

 0.951 - - - - 0.951 - Mlig455_029510 {REF} {Length: 534} {Pfam: Cytoplasmic repetitive antigen (CRA) like repeat [PF07046.13, score=18.8]} {RNA1509_41792} {RNA1310_59954.1} {RNA815_36681.1}
24. MligTC455_43903 145 3.03 Mlig455_004481, Mlig455_037376

Neo: -

Age: -

Region-enriched R7: 3.322/0.01087

 TRPM1, TRPM7 0.951 - - - - - 0.951

Mlig455_004481 {REF} {Length: 3763} {Human: ENSG00000092439, TRPM7, transient receptor potential cation channel subfamily M member 7, [Score=77.8, Expect=5e-14]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=77.0, Expect=1e-13]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=74.7, Expect=5e-13]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=74.7, Expect=5e-13]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=77.0, Expect=7e-14]; ENSMUSG00000027365, Trpm7, transient receptor potential cation channel, subfamily M, member 7, [Score=75.5, Expect=2e-13]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=73.6, Expect=8e-13]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=92.4, Expect=9e-19]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=66.6, Expect=6e-11]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=94.4, Expect=8e-20]} {RNA1509_37917} {RNA1310_5795.1, RNA1509_37917} {RNA1509_37917, RNA815_21056}

Mlig455_037376 {REF} {Length: 1266} {Human: ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=52.0, Expect=4e-08]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=52.0, Expect=5e-08]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=52.0, Expect=5e-08]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=52.4, Expect=3e-08]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=51.6, Expect=1e-08]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=48.1, Expect=6e-07]} {Smed: dd_Smed_v6_15098_0_1, dd_Smed_v6_15098_0_1, [Score=55.1, Expect=1e-09]} {RNA1509_37917} {RNA1310_26966.1} {RNA815_56051}

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