TomoSeq data search

Data search

Results for MligTC455_42316

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42316

307

6.39

Mlig455_069306

Neo: -

Age: Down-Up-Down

Region-enriched R7: 2.824/0.00083
Region-enriched R2: 2.239/0.04069

Mlig455_069306 {REF} {Length: 1726} {Celegans: WBGene00016289, lntl-1, LIN-24 (Twenty-four) Like, [Score=85.9, Expect=3e-19]} {RNA1509_20174} {RNA1310_21743} {RNA815_10165}

Cumulative graph for MligTC455_42316

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.626	2.975	0.07217	0.59742
RegionR2	2.239	2.975	0.00249	0.04069
RegionR3	1.011	2.975	0.20850	0.74896
RegionR4	-1.156	2.975	0.99123	1.00000
RegionR5	-1.194	2.975	0.99216	1.00000
RegionR6	0.914	2.975	0.27975	0.86952
RegionR7	2.824	2.975	0.00001	0.00083
RegionR8	1.988	2.975	0.03021	0.33905

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.329	2.975	0.99994	1.00000
RegenerationR2	-0.229	2.975	0.62405	0.92438
RegenerationR3	-0.202	2.975	0.72529	0.95636
RegenerationR4	0.167	2.975	0.80680	0.98851
RegenerationR5	0.259	2.975	0.69214	0.94856
RegenerationR6	0.161	2.975	0.78332	0.96914
RegenerationBL	-0.232	2.975	0.70602	1.00000
RegenerationTP	-0.976	2.975	0.13652	0.55401

Genes with expression patterns similar to MligTC455_42316

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42316	307	6.39	Mlig455_069306	Neo: - Age: Down-Up-Down Region-enriched R7: 2.824/0.00083 Region-enriched R2: 2.239/0.04069		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_069306 {REF} {Length: 1726} {Celegans: WBGene00016289, lntl-1, LIN-24 (Twenty-four) Like, [Score=85.9, Expect=3e-19]} {RNA1509_20174} {RNA1310_21743} {RNA815_10165}
2.	MligTC455_29580	523	10.89	Mlig455_004620, Mlig455_004629, Mlig455_004656	Neo: - Age: - Region-enriched R8: 2.467/0.03081 Region-enriched R7: 2.313/0.00806	AP1S2	3.286	0.956	-	0.828	0.728	0.774	-	Mlig455_004620 {REF} {Length: 2855} {TRANSSPLICED} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=193.9]} {Human: ENSG00000182287, AP1S2, adaptor related protein complex 1 subunit sigma 2, [RH, Score=261, Expect=2e-90]; ENSG00000106367, AP1S1, adaptor related protein complex 1 subunit sigma 1, [RH, Score=252, Expect=5e-87]} {Mouse: ENSMUSG00000031367, Ap1s2, adaptor-related protein complex 1, sigma 2 subunit, [RH, Score=261, Expect=1e-90]; ENSMUSG00000004849, Ap1s1, adaptor protein complex AP-1, sigma 1, [RH, Score=252, Expect=3e-87]} {Dmel: FBgn0039132, AP-1sigma, Adaptor Protein complex 1, sigma subunit, [RH, Score=282, Expect=3e-99]} {Celegans: WBGene00000159, aps-1, AdaPtin, Small chain (Clathrin associated complex), [RH, Score=278, Expect=9e-98]} {Smed: dd_Smed_v6_2365_0_1, dd_Smed_v6_2365_0_1, [RH, Score=274, Expect=5e-96]} {RNA1509_14918} {RNA1310_4459.1} {RNA815_4627} Mlig455_004629 {REF} {Length: 2802} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=193.6]} {Human: ENSG00000182287, AP1S2, adaptor related protein complex 1 subunit sigma 2, [RH, Score=269, Expect=2e-93]; ENSG00000106367, AP1S1, adaptor related protein complex 1 subunit sigma 1, [RH, Score=263, Expect=3e-91]} {Mouse: ENSMUSG00000031367, Ap1s2, adaptor-related protein complex 1, sigma 2 subunit, [RH, Score=269, Expect=1e-93]; ENSMUSG00000004849, Ap1s1, adaptor protein complex AP-1, sigma 1, [RH, Score=263, Expect=2e-91]} {Dmel: FBgn0039132, AP-1sigma, Adaptor Protein complex 1, sigma subunit, [RH, Score=262, Expect=4e-91]} {Celegans: WBGene00000159, aps-1, AdaPtin, Small chain (Clathrin associated complex), [Score=256, Expect=1e-88]} {Smed: dd_Smed_v6_9393_0_2, dd_Smed_v6_9393_0_2, [RH, Score=262, Expect=3e-91]} {RNA1509_14918} {RNA1310_4459.1} {RNA815_3355.1} Mlig455_004656 {REF} {Length: 1887} {TRANSSPLICED} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=193.6]} {Human: ENSG00000182287, AP1S2, adaptor related protein complex 1 subunit sigma 2, [RH, Score=270, Expect=7e-94]; ENSG00000106367, AP1S1, adaptor related protein complex 1 subunit sigma 1, [RH, Score=263, Expect=6e-91]} {Mouse: ENSMUSG00000031367, Ap1s2, adaptor-related protein complex 1, sigma 2 subunit, [RH, Score=270, Expect=5e-94]; ENSMUSG00000004849, Ap1s1, adaptor protein complex AP-1, sigma 1, [RH, Score=263, Expect=4e-91]} {Dmel: FBgn0039132, AP-1sigma, Adaptor Protein complex 1, sigma subunit, [RH, Score=262, Expect=3e-91]} {Celegans: WBGene00000159, aps-1, AdaPtin, Small chain (Clathrin associated complex), [Score=256, Expect=8e-89]} {Smed: dd_Smed_v6_9393_0_2, dd_Smed_v6_9393_0_2, [RH, Score=263, Expect=1e-91]} {RNA1509_14918} {RNA1310_7376.1} {RNA815_4627}
3.	MligTC455_22509	603	12.56	Mlig455_003867	Neo: - Age: - Region-enriched R2: 1.712/0.01995	SLC7A4	2.651	-	0.853	-	0.843	-	0.955	Mlig455_003867 {REF} {Length: 4423} {Pfam: Amino acid permease [PF13520.8, score=133.3]; Amino acid permease [PF00324.23, score=105.2]; C-terminus of AA_permease [PF13906.8, score=72.9]} {Human: ENSG00000099960, SLC7A4, solute carrier family 7 member 4, [RH, Score=400, Expect=1e-130]} {Mouse: ENSMUSG00000022756, Slc7a4, solute carrier family 7 (cationic amino acid transporter, y+ system), member 4, [RH, Score=422, Expect=2e-139]} {Dmel: FBgn0036984, CG13248, [RH, Score=458, Expect=5e-153]} {Celegans: WBGene00016806, C50D2.2, [RH, Score=416, Expect=1e-137]} {Smed: dd_Smed_v6_8652_0_2, dd_Smed_v6_8652_0_2, [Score=283, Expect=6e-87]} {RNA1509_13053, RNA1509_36328} {RNA1310_3004.1, RNA1509_13053, RNA1509_36328} {RNA1509_13053, RNA1509_36328, RNA815_1376}
4.	MligTC455_21946	173	3.59	Mlig455_018218	Neo: - Age: - Region-enriched R2: 3.881/0.00497	CDH18	2.584	0.803	-	-	0.972	-	0.809	Mlig455_018218 {REF} {Length: 4227} {Pfam: Cadherin cytoplasmic region [PF01049.19, score=86.9]; Laminin G domain [PF02210.26, score=84.1]; Laminin G domain [PF00054.25, score=59.1]; EGF-like domain [PF00008.29, score=34.5]; Human growth factor-like EGF [PF12661.9, score=20.0]} {Human: ENSG00000145526, CDH18, cadherin 18, [Score=107, Expect=3e-23]} {Mouse: ENSMUSG00000040420, Cdh18, cadherin 18, [Score=107, Expect=3e-23]; ENSMUSG00000107269, Celsr3, cadherin, EGF LAG seven-pass G-type receptor 3, [Score=105, Expect=1e-22]; ENSMUSG00000023473, Celsr3, cadherin, EGF LAG seven-pass G-type receptor 3, [Score=105, Expect=1e-22]} {Dmel: FBgn0015609, CadN, Cadherin-N, [Score=246, Expect=2e-67]} {Celegans: WBGene00001980, hmr-1, Cadherin-related hmr-1, [Score=94.4, Expect=2e-19]} {Smed: dd_Smed_v6_9254_0_1, dd_Smed_v6_9254_0_1, [RH, Score=72.4, Expect=6e-13]} {RNA1509_55246} {RNA1310_146.1} {RNA815_6414}
5.	MligTC455_46793	652	13.58	Mlig455_058553	Neo: - Age: -	SYTL4	2.52	-	0.724	-	0.959	-	0.837	Mlig455_058553 {REF} {Length: 2601} {TRANSSPLICED} {Pfam: C2 domain [PF00168.32, score=103.1]} {Human: ENSG00000102362, SYTL4, synaptotagmin like 4, [Score=153, Expect=2e-38]; ENSG00000147041, SYTL5, synaptotagmin like 5, [Score=150, Expect=2e-37]; ENSG00000142765, SYTL1, synaptotagmin like 1, [Score=149, Expect=1e-37]} {Mouse: ENSMUSG00000031255, Sytl4, synaptotagmin-like 4, [Score=160, Expect=6e-41]} {Dmel: FBgn0266756, btsz, bitesize, [Score=193, Expect=2e-51]} {Celegans: WBGene00004921, snt-1, Synaptotagmin-1, [Score=86.3, Expect=1e-17]} {Smed: dd_Smed_v6_10375_0_1, dd_Smed_v6_10375_0_1, [RH, Score=157, Expect=3e-40]} {RNA1509_50455} {RNA1310_5507.1, RNA1509_50455} {RNA1509_50455, RNA815_17811}
6.	MligTC455_15506	219	4.57	Mlig455_025204	Neo: - Age: logFC(26M/2M)=-0.337	ANKEF1	2.435	-	0.705	-	0.970	-	0.760	Mlig455_025204 {REF} {Length: 2950} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=181.3]; Ankyrin repeats (many copies) [PF13637.8, score=145.9]; Ankyrin repeats (many copies) [PF13857.8, score=133.7]; Ankyrin repeat [PF00023.32, score=131.5]; Ankyrin repeat [PF13606.8, score=130.5]} {Human: ENSG00000132623, ANKEF1, ankyrin repeat and EF-hand domain containing 1, [RH, Score=531, Expect=7e-178]} {Mouse: ENSMUSG00000074771, Ankef1, ankyrin repeat and EF-hand domain containing 1, [RH, Score=543, Expect=0.0]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=123, Expect=2e-28]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=120, Expect=1e-27]} {Smed: dd_Smed_v6_12476_0_1, dd_Smed_v6_12476_0_1, [RH, Score=731, Expect=0.0]} {RNA1509_36316, RNA1509_7497} {RNA1310_7884.1, RNA1509_36316, RNA1509_7497} {RNA1509_36316, RNA1509_7497, RNA815_1782}
7.	MligTC455_49099	448	9.33	Mlig455_017685, Mlig455_017754, Mlig455_053758	Neo: - Age: - Region-specific R2: 3.886	DAPK1	1.726	-	0.759	-	0.967	-	-	Mlig455_017685 {REF} {Length: 4238} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=123.8]; Ankyrin repeats (many copies) [PF13857.8, score=98.6]; Ankyrin repeats (many copies) [PF13637.8, score=87.3]; Ankyrin repeat [PF00023.32, score=84.7]; Ankyrin repeat [PF13606.8, score=83.5]; Death domain [PF00531.24, score=51.6]; C-terminal of Roc, COR, domain [PF16095.7, score=29.6]} {Human: ENSG00000196730, DAPK1, death associated protein kinase 1, [RH, Score=496, Expect=6e-154]} {Mouse: ENSMUSG00000021559, Dapk1, death associated protein kinase 1, [RH, Score=486, Expect=2e-150]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=129, Expect=1e-29]} {Celegans: WBGene00003400, dapk-1, Death-associated protein kinase dapk-1, [RH, Score=485, Expect=1e-151]} {Smed: dd_Smed_v6_9475_0_1, dd_Smed_v6_9475_0_1, [RH, Score=903, Expect=0.0]} {RNA1509_33335} {RNA1310_2934} {RNA815_10357} Mlig455_017754 {REF} {Length: 4057} {Pfam: Death domain [PF00531.24, score=52.2]; Ankyrin repeats (3 copies) [PF12796.9, score=41.8]; Ankyrin repeats (many copies) [PF13857.8, score=37.8]; Ankyrin repeat [PF00023.32, score=37.4]; Ankyrin repeat [PF13606.8, score=35.8]; C-terminal of Roc, COR, domain [PF16095.7, score=31.3]; Ankyrin repeats (many copies) [PF13637.8, score=24.5]} {Human: ENSG00000196730, DAPK1, death associated protein kinase 1, [Score=388, Expect=4e-117]} {Mouse: ENSMUSG00000021559, Dapk1, death associated protein kinase 1, [Score=379, Expect=3e-114]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=59.3, Expect=1e-08]} {Celegans: WBGene00003400, dapk-1, Death-associated protein kinase dapk-1, [Score=407, Expect=2e-127]} {Smed: dd_Smed_v6_9475_0_1, dd_Smed_v6_9475_0_1, [Score=771, Expect=0.0]} {RNA1509_33335} {RNA1310_2934} {RNA815_10357} Mlig455_053758 {REF} {Length: 4268} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=123.8]; Ankyrin repeats (many copies) [PF13857.8, score=98.6]; Ankyrin repeats (many copies) [PF13637.8, score=87.3]; Ankyrin repeat [PF00023.32, score=84.7]; Ankyrin repeat [PF13606.8, score=83.5]; Death domain [PF00531.24, score=51.6]; C-terminal of Roc, COR, domain [PF16095.7, score=29.6]} {Human: ENSG00000196730, DAPK1, death associated protein kinase 1, [RH, Score=496, Expect=6e-154]} {Mouse: ENSMUSG00000021559, Dapk1, death associated protein kinase 1, [RH, Score=486, Expect=2e-150]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=129, Expect=1e-29]} {Celegans: WBGene00003400, dapk-1, Death-associated protein kinase dapk-1, [RH, Score=485, Expect=1e-151]} {Smed: dd_Smed_v6_9475_0_1, dd_Smed_v6_9475_0_1, [RH, Score=903, Expect=0.0]} {RNA1509_33335} {RNA1310_2934, RNA1509_33335} {RNA1509_33335, RNA815_10357}
8.	MligTC455_10035	177	3.7	Mlig455_070770	Neo: Irradiation Age: Down-Down-Down, logFC(26M/2M)=-1.114		0.976	-	-	-	0.976	-	-	Mlig455_070770 {REF} {Length: 1452} {NoTransDecoderORF} {RNA1509_18811} {RNA1310_39704} {RNA815_51915}
9.	MligTC455_23699	1101	22.94	Mlig455_063262	Neo: - Age: -		0.969	-	-	-	-	-	0.969	Mlig455_063262 {REF} {Length: 3844} {RNA1509_5326} {RNA1310_3123} {RNA815_678}
10.	MligTC455_26773	225	4.68	Mlig455_038010	Neo: - Age: logFC(26M/2M)=-0.420 Region-enriched R7: 3.223/0.00025 Region-enriched R2: 3.076/0.00620	ANO7	0.965	-	0.965	-	-	-	-	Mlig455_038010 {REF} {Length: 4566} {Pfam: Calcium-activated chloride channel [PF04547.14, score=519.7]; Dimerisation domain of Ca+-activated chloride-channel, anoctamin [PF16178.7, score=242.9]} {Human: ENSG00000146205, ANO7, anoctamin 7, [RH, Score=874, Expect=0.0]} {Mouse: ENSMUSG00000034107, Ano7, anoctamin 7, [RH, Score=885, Expect=0.0]} {Dmel: FBgn0038721, subdued, [RH, Score=594, Expect=0.0]} {Celegans: WBGene00010138, anoh-1, Anoctamin, [Score=242, Expect=9e-68]} {Smed: dd_Smed_v6_4761_0_1, dd_Smed_v6_4761_0_1, [RH, Score=1090, Expect=0.0]} {RNA1509_15570} {RNA1310_5583.1, RNA1509_15570} {RNA1509_15570, RNA815_1646.1}
11.	MligTC455_39857	27	0.55	Mlig455_037127	Neo: - Age: Down-Down-Down	NECAB1	0.965	-	-	-	0.965	-	-	Mlig455_037127 {REF} {Length: 1710} {Pfam: EF-hand domain [PF13405.8, score=34.9]; EF hand [PF00036.34, score=33.1]; EF-hand domain pair [PF13499.8, score=27.6]; EF-hand domain pair [PF13833.8, score=27.3]; Antibiotic biosynthesis monooxygenase [PF03992.18, score=25.2]; EF hand [PF13202.8, score=23.2]} {Human: ENSG00000123119, NECAB1, N-terminal EF-hand calcium binding protein 1, [Score=186, Expect=7e-55]} {Mouse: ENSMUSG00000040536, Necab1, N-terminal EF-hand calcium binding protein 1, [Score=180, Expect=7e-53]} {RNA1310_5770} {RNA815_27367}
12.	MligTC455_39078	130	2.7	Mlig455_060090	Neo: - Age: -		0.964	-	-	-	0.964	-	-	Mlig455_060090 {REF} {Length: 493} {NoTransDecoderORF} {RNA1509_45542} {RNA1310_46086} {RNA815_33321.1}
13.	MligTC455_51602	235	4.9	Mlig455_046885	Neo: - Age: - Region-enriched R2: 3.077/0.00701	PCBP3	0.963	-	-	-	0.963	-	-	Mlig455_046885 {REF} {Length: 3838} {Pfam: KH domain [PF00013.31, score=177.6]; KH domain [PF07650.19, score=58.6]; KH domain [PF13083.8, score=27.1]; KH-like RNA-binding domain [PF16005.7, score=24.6]} {Human: ENSG00000183570, PCBP3, poly(rC) binding protein 3, [Score=305, Expect=3e-98]} {Mouse: ENSMUSG00000001120, Pcbp3, poly(rC) binding protein 3, [Score=298, Expect=1e-95]} {Dmel: FBgn0262737, mub, mushroom-body expressed, [RH, Score=282, Expect=3e-89]} {Celegans: WBGene00003978, pes-4, Patterned Expression Site, [RH, Score=228, Expect=1e-68]} {Smed: dd_Smed_v6_7334_0_1, dd_Smed_v6_7334_0_1, [Score=258, Expect=1e-78]} {RNA1509_47335} {RNA1310_5732, RNA1509_47335} {RNA1509_47335, RNA815_22034}
14.	MligTC455_23698	1263	26.31	Mlig455_010058	Neo: - Age: -		0.957	-	-	-	-	-	0.957	Mlig455_010058 {REF} {Length: 4489} {RNA1509_5326} {RNA1310_3123, RNA1509_5326} {RNA1509_5326, RNA815_678}
15.	MligTC455_37726	70	1.46	Mlig455_058690	Neo: - Age: - Region-enriched R4: 4.625/0.04727		0.956	-	-	-	0.956	-	-	Mlig455_058690 {REF} {Length: 3017} {NoTransDecoderORF} {RNA1509_54874} {RNA1310_103756} {RNA815_8730.1}
16.	MligTC455_14351	20	0.42	Mlig455_033296	Neo: - Age: -		0.954	-	-	-	0.954	-	-	Mlig455_033296 {REF} {Length: 904} {NoTransDecoderORF} {RNA1310_77166} {RNA815_51589}
17.	MligTC455_37440	78	1.62	Mlig455_019008	Neo: - Age: -		0.952	-	-	-	0.952	-	-	Mlig455_019008 {REF} {Length: 1896} {RNA1509_49181} {RNA1310_31711} {RNA815_17406}
18.	MligTC455_27289	174	3.62	Mlig455_032072	Neo: - Age: -	PRKCA	0.951	-	-	-	0.951	-	-	Mlig455_032072 {REF} {Length: 2236} {Pfam: Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=117.5]; C2 domain [PF00168.32, score=104.8]; Protein kinase domain [PF00069.27, score=56.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=31.7]; C1 domain [PF03107.18, score=23.8]} {Human: ENSG00000154229, PRKCA, protein kinase C alpha, [Score=623, Expect=0.0]; ENSG00000166501, PRKCB, protein kinase C beta, [Score=622, Expect=0.0]} {Mouse: ENSMUSG00000050965, Prkca, protein kinase C, alpha, [Score=625, Expect=0.0]; ENSMUSG00000052889, Prkcb, protein kinase C, beta, [Score=621, Expect=0.0]} {Dmel: FBgn0003091, Pkc53E, Protein C kinase 53E, [Score=605, Expect=0.0]} {Celegans: WBGene00004033, pkc-2, Protein kinase C-like 2, [Score=598, Expect=0.0]} {Smed: dd_Smed_v6_4244_0_1, dd_Smed_v6_4244_0_1, [Score=669, Expect=0.0]} {RNA1509_31401} {RNA1310_40887} {RNA815_7477.1}
19.	MligTC455_32152	27	0.56	Mlig455_049207	Neo: - Age: -		0.951	-	-	-	0.951	-	-	Mlig455_049207 {REF} {Length: 2298} {Pfam: F5/8 type C domain [PF00754.27, score=22.6]} {RNA1509_50442} {RNA1310_39050} {RNA815_54346}

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