TomoSeq data search

Data search

Results for MligTC455_42445

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_42445	1100	22.92	Mlig455_023727, Mlig455_023734	Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=1.175 Region-enriched R3: 2.517/0.00579		Mlig455_023727 {REF} {Length: 1484} {TRANSSPLICED} {Pfam: TNF(Tumour Necrosis Factor) family [PF00229.20, score=27.4]} {RNA1509_17720, RNA1509_24899, RNA1509_28061} {RNA1310_17164, RNA1509_17720, RNA1509_24899, RNA1509_28061} {RNA1509_17720, RNA1509_24899, RNA1509_28061, RNA815_11825} Mlig455_023734 {REF} {Length: 1391} {TRANSSPLICED} {Pfam: TNF(Tumour Necrosis Factor) family [PF00229.20, score=27.4]} {RNA1509_28061} {RNA1310_17164} {RNA815_11825}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_42445

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.313	4.783	0.81912	1.00000
RegionR2	-1.012	4.783	0.26893	0.65245
RegionR3	2.517	4.783	0.00013	0.00579
RegionR4	0.752	4.783	0.32282	0.64012
RegionR5	1.467	4.783	0.02208	0.10418
RegionR6	0.429	4.783	0.53597	1.00000
RegionR7	-2.773	4.783	0.01008	0.17252
RegionR8	-1.068	4.783	0.30497	0.93727

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.939	4.783	0.52856	1.00000
RegenerationR2	0.877	4.783	0.32092	0.75891
RegenerationR3	-0.284	4.783	0.72334	0.95557
RegenerationR4	0.015	4.783	0.98414	1.00000
RegenerationR5	-0.369	4.783	0.66336	0.93744
RegenerationR6	-0.119	4.783	0.89399	1.00000
RegenerationBL	1.224	4.783	0.16074	0.48096
RegenerationTP	0.558	4.783	0.61247	0.96791

Genes with expression patterns similar to MligTC455_42445

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42445	1100	22.92	Mlig455_023727, Mlig455_023734	Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=1.175 Region-enriched R3: 2.517/0.00579		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_023727 {REF} {Length: 1484} {TRANSSPLICED} {Pfam: TNF(Tumour Necrosis Factor) family [PF00229.20, score=27.4]} {RNA1509_17720, RNA1509_24899, RNA1509_28061} {RNA1310_17164, RNA1509_17720, RNA1509_24899, RNA1509_28061} {RNA1509_17720, RNA1509_24899, RNA1509_28061, RNA815_11825} Mlig455_023734 {REF} {Length: 1391} {TRANSSPLICED} {Pfam: TNF(Tumour Necrosis Factor) family [PF00229.20, score=27.4]} {RNA1509_28061} {RNA1310_17164} {RNA815_11825}
2.	MligTC455_11767	58	1.22	Mlig455_045883	Neo: - Age: Down-Down-Up		1.88	-	-	-	0.953	-	0.927	Mlig455_045883 {REF} {Length: 1461} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=32.6]} {RNA1310_37718} {RNA815_38330}
3.	MligTC455_32450	834	17.38	Mlig455_043998	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.343 Region-enriched R4: 2.351/0.00100 Region-enriched R3: 1.634/0.01046	ACHE	1.733	0.783	-	-	-	0.950	-	Mlig455_043998 {REF} {Length: 6344} {Pfam: Carboxylesterase family [PF00135.30, score=510.5]} {Human: ENSG00000087085, ACHE, acetylcholinesterase (Cartwright blood group), [Score=206, Expect=1e-55]} {Mouse: ENSMUSG00000023328, Ache, acetylcholinesterase, [Score=187, Expect=2e-49]; ENSMUSG00000027792, Bche, butyrylcholinesterase, [Score=181, Expect=3e-47]} {Dmel: FBgn0029690, CG6414, [RH, Score=172, Expect=1e-44]} {Celegans: WBGene00000035, ace-1, Acetylcholinesterase 1, [Score=182, Expect=7e-48]} {Smed: dd_Smed_v6_4935_0_1, dd_Smed_v6_4935_0_1, [Score=179, Expect=2e-46]} {RNA1509_1740, RNA1509_51083} {RNA1310_963.1, RNA1509_51083} {RNA1509_51083, RNA815_836}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_42445

1100

22.92

Mlig455_023727, Mlig455_023734

Neo: Irradiation

Age: Down-Up-Up, logFC(26M/2M)=1.175

Region-enriched R3: 2.517/0.00579

1.000

Mlig455_023734 {REF} {Length: 1391} {TRANSSPLICED} {Pfam: TNF(Tumour Necrosis Factor) family [PF00229.20, score=27.4]} {RNA1509_28061} {RNA1310_17164} {RNA815_11825}

MligTC455_11767

1.22

Mlig455_045883

Neo: -

Age: Down-Down-Up

1.88

0.953

0.927

Mlig455_045883 {REF} {Length: 1461} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=32.6]} {RNA1310_37718} {RNA815_38330}

MligTC455_32450

834

17.38

Mlig455_043998

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.343

Region-enriched R4: 2.351/0.00100
Region-enriched R3: 1.634/0.01046

ACHE

1.733

0.783

0.950

Mlig455_043998 {REF} {Length: 6344} {Pfam: Carboxylesterase family [PF00135.30, score=510.5]} {Human: ENSG00000087085, ACHE, acetylcholinesterase (Cartwright blood group), [Score=206, Expect=1e-55]} {Mouse: ENSMUSG00000023328, Ache, acetylcholinesterase, [Score=187, Expect=2e-49]; ENSMUSG00000027792, Bche, butyrylcholinesterase, [Score=181, Expect=3e-47]} {Dmel: FBgn0029690, CG6414, [RH, Score=172, Expect=1e-44]} {Celegans: WBGene00000035, ace-1, Acetylcholinesterase 1, [Score=182, Expect=7e-48]} {Smed: dd_Smed_v6_4935_0_1, dd_Smed_v6_4935_0_1, [Score=179, Expect=2e-46]} {RNA1509_1740, RNA1509_51083} {RNA1310_963.1, RNA1509_51083} {RNA1509_51083, RNA815_836}