Data search
Results for MligTC455_42462
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42462 | 638 | 13.29 | Mlig455_045268 | Neo: - Age: - Region-enriched R7: 1.448/0.01675 |
GNB4 | Mlig455_045268 {REF} {Length: 2068} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=116.1]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=27.0]} {Human: ENSG00000114450, GNB4, G protein subunit beta 4, [Score=348, Expect=2e-118]; ENSG00000172354, GNB2, G protein subunit beta 2, [Score=345, Expect=4e-117]; ENSG00000078369, GNB1, G protein subunit beta 1, [Score=344, Expect=9e-117]; ENSG00000111664, GNB3, G protein subunit beta 3, [Score=336, Expect=1e-113]} {Mouse: ENSMUSG00000029713, Gnb2, guanine nucleotide binding protein (G protein), beta 2, [Score=346, Expect=6e-117]; ENSMUSG00000029064, Gnb1, guanine nucleotide binding protein (G protein), beta 1, [Score=344, Expect=6e-117]; ENSMUSG00000023439, Gnb3, guanine nucleotide binding protein (G protein), beta 3, [Score=337, Expect=3e-114]; ENSMUSG00000027669, Gnb4, guanine nucleotide binding protein (G protein), beta 4, [Score=332, Expect=5e-112]} {Dmel: FBgn0001105, Gbeta13F, G protein beta-subunit 13F, [Score=356, Expect=1e-121]} {Celegans: WBGene00001679, gpb-1, Guanine nucleotide-binding protein subunit beta-1, [Score=355, Expect=2e-121]} {Smed: dd_Smed_v6_2872_0_1, dd_Smed_v6_2872_0_1, [RH, Score=375, Expect=4e-129]} {RNA1509_5337} {RNA1310_9924.1} {RNA815_3556} |
Cumulative graph for MligTC455_42462
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.589 | 4.03 | 0.22230 | 0.86563 | |
| RegionR2 | 0.989 | 4.03 | 0.01916 | 0.14906 | |
| RegionR3 | -0.247 | 4.03 | 0.51749 | 1.00000 | |
| RegionR4 | -0.785 | 4.03 | 0.08563 | 0.27719 | |
| RegionR5 | -1.012 | 4.03 | 0.01449 | 0.07623 | |
| RegionR6 | 0.547 | 4.03 | 0.11299 | 0.61406 | |
| RegionR7 | 1.448 | 4.03 | 0.00039 | 0.01675 | |
| RegionR8 | 0.65 | 4.03 | 0.25541 | 0.87537 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.714 | 4.03 | 0.73324 | 1.00000 | |
| RegenerationR2 | -0.723 | 4.03 | 0.03721 | 0.31843 | |
| RegenerationR3 | 0.267 | 4.03 | 0.50255 | 0.85804 | |
| RegenerationR4 | 0.021 | 4.03 | 0.96027 | 1.00000 | |
| RegenerationR5 | 0.555 | 4.03 | 0.13731 | 0.54764 | |
| RegenerationR6 | 0.009 | 4.03 | 0.97837 | 1.00000 | |
| RegenerationBL | -0.268 | 4.03 | 0.57216 | 0.92548 | |
| RegenerationTP | -0.034 | 4.03 | 0.94234 | 1.00000 |
Genes with expression patterns similar to MligTC455_42462
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42462 | 638 | 13.29 | Mlig455_045268 | Neo: - Age: - Region-enriched R7: 1.448/0.01675 |
GNB4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_045268 {REF} {Length: 2068} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=116.1]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=27.0]} {Human: ENSG00000114450, GNB4, G protein subunit beta 4, [Score=348, Expect=2e-118]; ENSG00000172354, GNB2, G protein subunit beta 2, [Score=345, Expect=4e-117]; ENSG00000078369, GNB1, G protein subunit beta 1, [Score=344, Expect=9e-117]; ENSG00000111664, GNB3, G protein subunit beta 3, [Score=336, Expect=1e-113]} {Mouse: ENSMUSG00000029713, Gnb2, guanine nucleotide binding protein (G protein), beta 2, [Score=346, Expect=6e-117]; ENSMUSG00000029064, Gnb1, guanine nucleotide binding protein (G protein), beta 1, [Score=344, Expect=6e-117]; ENSMUSG00000023439, Gnb3, guanine nucleotide binding protein (G protein), beta 3, [Score=337, Expect=3e-114]; ENSMUSG00000027669, Gnb4, guanine nucleotide binding protein (G protein), beta 4, [Score=332, Expect=5e-112]} {Dmel: FBgn0001105, Gbeta13F, G protein beta-subunit 13F, [Score=356, Expect=1e-121]} {Celegans: WBGene00001679, gpb-1, Guanine nucleotide-binding protein subunit beta-1, [Score=355, Expect=2e-121]} {Smed: dd_Smed_v6_2872_0_1, dd_Smed_v6_2872_0_1, [RH, Score=375, Expect=4e-129]} {RNA1509_5337} {RNA1310_9924.1} {RNA815_3556} |
| 2. | MligTC455_23928 | 244 | 5.08 | Mlig455_032837 | Neo: - Age: Down-Up-Down |
0.958 | - | - | - | - | - | 0.958 | Mlig455_032837 {REF} {Length: 4606} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=19.3]} {Smed: dd_Smed_v6_9345_0_1, dd_Smed_v6_9345_0_1, [RH, Score=53.1, Expect=1e-07]} {RNA1509_15414} {RNA1310_1634.1, RNA1509_15414} {RNA1509_15414, RNA815_17672} | |
| 3. | MligTC455_40237 | 279 | 5.81 | Mlig455_010405 | Neo: - Age: - |
CASP10 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_010405 {REF} {Length: 3343} {Pfam: Caspase domain [PF00656.24, score=104.0]; Ankyrin repeats (3 copies) [PF12796.9, score=68.5]; Ankyrin repeats (many copies) [PF13637.8, score=59.2]; Ankyrin repeat [PF13606.8, score=44.6]; Ankyrin repeats (many copies) [PF13857.8, score=41.9]; Ankyrin repeat [PF00023.32, score=41.6]} {Human: ENSG00000003400, CASP10, caspase 10, [Score=117, Expect=1e-27]; ENSG00000064012, CASP8, caspase 8, [Score=117, Expect=3e-27]; ENSG00000132906, CASP9, caspase 9, [Score=114, Expect=4e-27]} {Mouse: ENSMUSG00000026029, Casp8, caspase 8, [Score=119, Expect=4e-28]; ENSMUSG00000028914, Casp9, caspase 9, [Score=115, Expect=5e-27]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [Score=97.8, Expect=5e-22]} {Celegans: WBGene00000819, csp-1, Caspase A Caspase A subunit p16 Caspase A subunit p14, [Score=108, Expect=3e-26]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=107, Expect=7e-26]} {RNA1509_45595} {RNA1310_4410.1} {RNA815_21882} |
Berezikov Lab - 2020-2021 © ERIBA