TomoSeq data search

Data search

Results for MligTC455_42533

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_42533	19	0.40	Mlig455_043893	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.114		Mlig455_043893 {REF} {Length: 1385} {RNA1509_28941} {RNA1310_4909.1} {RNA815_12549.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_42533

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.634	0.712	0.99966	1.00000
RegionR2	5.481	0.712	0.99980	1.00000
RegionR3	1.479	0.712	0.99989	1.00000
RegionR4	-4.091	0.712	0.99982	1.00000
RegionR5	-0.101	0.712	0.99995	1.00000
RegionR6	1.501	0.712	0.99992	1.00000
RegionR7	1.233	0.712	0.99995	1.00000
RegionR8	1.131	0.712	0.99992	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	7.061	0.712	0.99992	1.00000
RegenerationR2	3.269	0.712	0.00803	0.14303
RegenerationR3	6.261	0.712	0.00062	0.03733
RegenerationR4	4.805	0.712	0.00604	0.11136
RegenerationR5	5.384	0.712	0.00029	0.02649
RegenerationR6	5.196	0.712	0.00292	0.06257
RegenerationBL	1.78	0.712	0.99988	1.00000
RegenerationTP	5.992	0.712	0.00568	0.12642

Genes with expression patterns similar to MligTC455_42533

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42533	19	0.4	Mlig455_043893	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.114		1	-	-	-	-	-	1.000	Mlig455_043893 {REF} {Length: 1385} {RNA1509_28941} {RNA1310_4909.1} {RNA815_12549.1}
2.	MligTC455_35231	27	0.57	Mlig455_056797	Neo: - Age: logFC(26M/2M)=-0.485 Region-enriched R2: 5.845/0.03546 Regeneration-upregulated R3: 5.742 Regeneration-enriched R3: 5.742		0.963	-	-	-	-	-	0.963	Mlig455_056797 {REF} {Length: 797} {RNA1509_55260} {RNA1310_29893} {RNA815_2539.1}
3.	MligTC455_27510	24	0.51	Mlig455_047074	Neo: - Age: logFC(26M/2M)=-0.726	CASP3	0.962	-	-	-	-	-	0.962	Mlig455_047074 {REF} {Length: 4386} {Pfam: Caspase domain [PF00656.24, score=151.7]; Ankyrin repeats (3 copies) [PF12796.9, score=61.2]; Ankyrin repeats (many copies) [PF13637.8, score=56.4]; Ankyrin repeats (many copies) [PF13857.8, score=45.9]; Ankyrin repeat [PF13606.8, score=41.1]; Ankyrin repeat [PF00023.32, score=30.8]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=141, Expect=6e-37]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=143, Expect=1e-37]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [Score=105, Expect=3e-24]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=97.1, Expect=7e-22]} {Smed: dd_Smed_v6_3121_1_1, dd_Smed_v6_3121_1_1, [Score=134, Expect=5e-35]} {RNA1509_24726} {RNA1310_16739} {RNA815_10088.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_42533

0.4

Mlig455_043893

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.114

1.000

Mlig455_043893 {REF} {Length: 1385} {RNA1509_28941} {RNA1310_4909.1} {RNA815_12549.1}

MligTC455_35231

0.57

Mlig455_056797

Neo: -

Age: logFC(26M/2M)=-0.485

Region-enriched R2: 5.845/0.03546

Regeneration-upregulated R3: 5.742

Regeneration-enriched R3: 5.742

0.963

Mlig455_056797 {REF} {Length: 797} {RNA1509_55260} {RNA1310_29893} {RNA815_2539.1}

MligTC455_27510

0.51

Mlig455_047074

Neo: -

Age: logFC(26M/2M)=-0.726

CASP3

0.962

Mlig455_047074 {REF} {Length: 4386} {Pfam: Caspase domain [PF00656.24, score=151.7]; Ankyrin repeats (3 copies) [PF12796.9, score=61.2]; Ankyrin repeats (many copies) [PF13637.8, score=56.4]; Ankyrin repeats (many copies) [PF13857.8, score=45.9]; Ankyrin repeat [PF13606.8, score=41.1]; Ankyrin repeat [PF00023.32, score=30.8]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=141, Expect=6e-37]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=143, Expect=1e-37]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [Score=105, Expect=3e-24]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=97.1, Expect=7e-22]} {Smed: dd_Smed_v6_3121_1_1, dd_Smed_v6_3121_1_1, [Score=134, Expect=5e-35]} {RNA1509_24726} {RNA1310_16739} {RNA815_10088.1}