Data search
Results for MligTC455_42535
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42535 | 614 | 12.80 | Mlig455_003159, Mlig455_003358 | Neo: - Age: - |
Mlig455_003159 {REF} {Length: 1322} {TRANSSPLICED} {RNA1310_25570.1} {RNA815_10938} Mlig455_003358 {REF} {Length: 1355} {TRANSSPLICED} {RNA1310_25570.1} {RNA815_10938} |
Cumulative graph for MligTC455_42535
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.127 | 4.01 | 0.11616 | 0.70427 | |
| RegionR2 | 0.311 | 4.01 | 0.70759 | 1.00000 | |
| RegionR3 | 0.476 | 4.01 | 0.58334 | 1.00000 | |
| RegionR4 | 1.411 | 4.01 | 0.08261 | 0.27061 | |
| RegionR5 | 1.295 | 4.01 | 0.05181 | 0.19246 | |
| RegionR6 | 0.81 | 4.01 | 0.32898 | 0.91735 | |
| RegionR7 | 1.261 | 4.01 | 0.12624 | 0.66954 | |
| RegionR8 | 0.564 | 4.01 | 0.59481 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 7.288 | 4.01 | 0.04550 | 0.68092 | |
| RegenerationR2 | -0.165 | 4.01 | 0.73480 | 0.96757 | |
| RegenerationR3 | 0.375 | 4.01 | 0.48467 | 0.85270 | |
| RegenerationR4 | -0.184 | 4.01 | 0.73696 | 0.96674 | |
| RegenerationR5 | -0.53 | 4.01 | 0.27320 | 0.70411 | |
| RegenerationR6 | 0.458 | 4.01 | 0.37632 | 0.71818 | |
| RegenerationBL | 0.506 | 4.01 | 0.37518 | 0.74367 | |
| RegenerationTP | 0.408 | 4.01 | 0.52277 | 0.91550 |
Genes with expression patterns similar to MligTC455_42535
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42535 | 614 | 12.8 | Mlig455_003159, Mlig455_003358 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_003159 {REF} {Length: 1322} {TRANSSPLICED} {RNA1310_25570.1} {RNA815_10938} Mlig455_003358 {REF} {Length: 1355} {TRANSSPLICED} {RNA1310_25570.1} {RNA815_10938} |
|
| 2. | MligTC455_15831 | 260 | 5.42 | Mlig455_018337 | Neo: - Age: logFC(26M/2M)=0.444 |
1.758 | 0.804 | - | - | - | 0.954 | - | Mlig455_018337 {REF} {Length: 1103} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF08242.14, score=59.8]; Methyltransferase domain [PF13489.8, score=58.1]; Methyltransferase domain [PF08241.14, score=57.1]; Methyltransferase domain [PF13847.8, score=52.1]; Methyltransferase domain [PF13649.8, score=51.1]; Tellurite resistance protein TehB [PF03848.16, score=20.2]} {RNA1509_14937} {RNA1310_7707.1} {RNA815_5313} | |
| 3. | MligTC455_27019 | 200 | 4.16 | Mlig455_047159, Mlig455_047237, Mlig455_047248 | Neo: - Age: Down-Up-Down |
0.972 | - | - | - | - | 0.972 | - | Mlig455_047159 {REF} {Length: 4057} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=53.9]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=18.0]} {Smed: dd_Smed_v6_33283_0_1, dd_Smed_v6_33283_0_1, [Score=273, Expect=6e-88]} {RNA1509_59825} {RNA1310_15909.1} {RNA815_28221} Mlig455_047237 {REF} {Length: 2719} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=53.9]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=18.0]} {Smed: dd_Smed_v6_33283_0_1, dd_Smed_v6_33283_0_1, [Score=273, Expect=6e-88]} {RNA1509_59825} {RNA1310_15909.1} {RNA815_28221} Mlig455_047248 {REF} {Length: 3995} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=39.1]} {Smed: dd_Smed_v6_33283_0_1, dd_Smed_v6_33283_0_1, [Score=180, Expect=2e-54]} {RNA1509_59825} {RNA1310_15909.1} {RNA815_28221} |
|
| 4. | MligTC455_19938 | 250 | 5.2 | Mlig455_063706 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.458 Region-enriched R3: 3.513/0.03723 |
NKX2-2 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_063706 {REF} {Length: 2739} {Pfam: Homeodomain [PF00046.31, score=72.6]} {Human: ENSG00000125820, NKX2-2, NK2 homeobox 2, [Score=119, Expect=3e-31]} {Mouse: ENSMUSG00000027434, Nkx2-2, NK2 homeobox 2, [Score=119, Expect=1e-31]} {Dmel: FBgn0261930, vnd, ventral nervous system defective, [Score=112, Expect=2e-27]} {Celegans: WBGene00000447, ceh-24, Homeobox protein ceh-24, [Score=95.9, Expect=8e-23]} {Smed: dd_Smed_v6_2716_0_4, dd_Smed_v6_2716_0_4, [Score=118, Expect=4e-30]} {RNA1509_27298} {RNA1310_16689.1, RNA1509_27298} {RNA1509_27298, RNA815_30453} |
| 5. | MligTC455_27020 | 51 | 1.05 | Mlig455_047301 | Neo: - Age: Up-Down-Down |
0.956 | - | - | - | - | 0.956 | - | Mlig455_047301 {REF} {Length: 2457} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=43.0]} {Smed: dd_Smed_v6_33283_0_1, dd_Smed_v6_33283_0_1, [Score=228, Expect=7e-71]} {RNA1509_59825} {RNA1310_15909.1} {RNA815_23932} | |
| 6. | MligTC455_45116 | 160 | 3.34 | Mlig455_013593 | Neo: - Age: Down-Up-Down Region-enriched R5: 2.671/0.00707 |
ZNF277 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_013593 {REF} {Length: 2093} {TRANSSPLICED} {Pfam: C2H2 type zinc-finger (2 copies) [PF12756.9, score=87.5]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=28.3]} {Human: ENSG00000198839, ZNF277, zinc finger protein 277, [RH, Score=124, Expect=5e-32]} {Mouse: ENSMUSG00000055917, Zfp277, zinc finger protein 277, [RH, Score=118, Expect=8e-29]} {Dmel: FBgn0034814, CG9890, [RH, Score=130, Expect=3e-33]} {Celegans: WBGene00009772, ztf-7, Zinc finger putative Transcription Factor family, [RH, Score=116, Expect=8e-28]} {RNA1509_8883} {RNA1310_20393} {RNA815_9523} |
| 7. | MligTC455_18923 | 743 | 15.48 | Mlig455_063038 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=-1.791 Region-enriched R4: 2.273/0.01537 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_063038 {REF} {Length: 1906} {RNA1509_26120} {RNA1310_29982} {RNA815_3607} | |
| 8. | MligTC455_11560 | 236 | 4.91 | Mlig455_002124 | Neo: - Age: - Region-enriched R4: 2.960/0.00334 |
0.951 | - | - | - | - | 0.951 | - | Mlig455_002124 {REF} {Length: 366} {NoTransDecoderORF} {RNA1310_54027} {RNA815_9806} |