TomoSeq data search

Data search

Results for MligTC455_42639

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_42639	287	5.97	Mlig455_030056	Neo: Int S/G2/M Age: Up-Down-Up	FBXL6	Mlig455_030056 {REF} {Length: 2171} {TRANSSPLICED} {Human: ENSG00000285442, FBXL6, F-box and leucine rich repeat protein 6, [Score=50.1, Expect=8e-06]; ENSG00000182325, FBXL6, F-box and leucine rich repeat protein 6, [Score=50.1, Expect=8e-06]} {Mouse: ENSMUSG00000022559, Fbxl6, F-box and leucine-rich repeat protein 6, [Score=51.2, Expect=2e-06]} {RNA1509_8614} {RNA1310_11540} {RNA815_3767}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_42639

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.795	3.087	0.54547	1.00000
RegionR2	0.471	3.087	0.53694	0.90636
RegionR3	-0.717	3.087	0.26598	0.81042
RegionR4	0.382	3.087	0.56647	0.88535
RegionR5	0.288	3.087	0.58247	0.94095
RegionR6	-0.504	3.087	0.42468	0.99125
RegionR7	-0.37	3.087	0.66051	1.00000
RegionR8	-0.346	3.087	0.75206	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.515	3.087	0.15658	0.89964
RegenerationR2	0.092	3.087	0.88529	1.00000
RegenerationR3	0.823	3.087	0.27775	0.71121
RegenerationR4	0.091	3.087	0.89792	1.00000
RegenerationR5	0.359	3.087	0.56240	0.89272
RegenerationR6	0.623	3.087	0.40821	0.74263
RegenerationBL	0.229	3.087	0.80096	1.00000
RegenerationTP	0.397	3.087	0.68241	1.00000

Genes with expression patterns similar to MligTC455_42639

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42639	287	5.97	Mlig455_030056	Neo: Int S/G2/M Age: Up-Down-Up	FBXL6	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_030056 {REF} {Length: 2171} {TRANSSPLICED} {Human: ENSG00000285442, FBXL6, F-box and leucine rich repeat protein 6, [Score=50.1, Expect=8e-06]; ENSG00000182325, FBXL6, F-box and leucine rich repeat protein 6, [Score=50.1, Expect=8e-06]} {Mouse: ENSMUSG00000022559, Fbxl6, F-box and leucine-rich repeat protein 6, [Score=51.2, Expect=2e-06]} {RNA1509_8614} {RNA1310_11540} {RNA815_3767}
2.	MligTC455_35041	388	8.08	Mlig455_068533	Neo: Int S/G2/M Age: logFC(26M/2M)=1.497 Region-enriched R5: 1.244/0.03269	USP36	0.962	-	-	-	-	-	0.962	Mlig455_068533 {REF} {Length: 3918} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=171.2]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=42.1]} {Human: ENSG00000055483, USP36, ubiquitin specific peptidase 36, [Score=189, Expect=2e-49]; ENSG00000106346, USP42, ubiquitin specific peptidase 42, [Score=186, Expect=3e-48]} {Mouse: ENSMUSG00000033909, Usp36, ubiquitin specific peptidase 36, [Score=190, Expect=7e-50]; ENSMUSG00000051306, Usp42, ubiquitin specific peptidase 42, [Score=187, Expect=1e-48]} {Dmel: FBgn0260936, scny, scrawny, [Score=149, Expect=7e-37]} {Celegans: WBGene00010702, usp-33, Ubiquitin carboxyl-terminal hydrolase, [RH, Score=139, Expect=6e-34]} {Smed: dd_Smed_v6_7150_0_4, dd_Smed_v6_7150_0_4, [Score=142, Expect=1e-35]} {RNA1509_46076} {RNA1310_7510} {RNA815_2440}
3.	MligTC455_47691	103	2.14	Mlig455_046561	Neo: - Age: -	UBTD2	0.959	-	-	-	0.959	-	-	Mlig455_046561 {REF} {Length: 3785} {Pfam: Ubiquitin-binding domain [PF16455.7, score=121.7]; Ubiquitin family [PF00240.25, score=33.5]} {Human: ENSG00000168246, UBTD2, ubiquitin domain containing 2, [RH, Score=218, Expect=9e-71]} {Mouse: ENSMUSG00000044949, Ubtd2, ubiquitin domain containing 2, [RH, Score=219, Expect=2e-71]} {Dmel: FBgn0264712, CG1172, [RH, Score=194, Expect=2e-61]} {Smed: dd_Smed_v6_3009_0_1, dd_Smed_v6_3009_0_1, [RH, Score=198, Expect=4e-63]} {RNA1509_42408} {RNA1310_33971} {RNA815_34971}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_42639

287

5.97

Mlig455_030056

Neo: Int S/G2/M

Age: Up-Down-Up

FBXL6

1.000

MligTC455_35041

388

8.08

Mlig455_068533

Neo: Int S/G2/M

Age: logFC(26M/2M)=1.497

Region-enriched R5: 1.244/0.03269

USP36

0.962

Mlig455_068533 {REF} {Length: 3918} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=171.2]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=42.1]} {Human: ENSG00000055483, USP36, ubiquitin specific peptidase 36, [Score=189, Expect=2e-49]; ENSG00000106346, USP42, ubiquitin specific peptidase 42, [Score=186, Expect=3e-48]} {Mouse: ENSMUSG00000033909, Usp36, ubiquitin specific peptidase 36, [Score=190, Expect=7e-50]; ENSMUSG00000051306, Usp42, ubiquitin specific peptidase 42, [Score=187, Expect=1e-48]} {Dmel: FBgn0260936, scny, scrawny, [Score=149, Expect=7e-37]} {Celegans: WBGene00010702, usp-33, Ubiquitin carboxyl-terminal hydrolase, [RH, Score=139, Expect=6e-34]} {Smed: dd_Smed_v6_7150_0_4, dd_Smed_v6_7150_0_4, [Score=142, Expect=1e-35]} {RNA1509_46076} {RNA1310_7510} {RNA815_2440}

MligTC455_47691

103

2.14

Mlig455_046561

Neo: -

Age: -

UBTD2

0.959

Mlig455_046561 {REF} {Length: 3785} {Pfam: Ubiquitin-binding domain [PF16455.7, score=121.7]; Ubiquitin family [PF00240.25, score=33.5]} {Human: ENSG00000168246, UBTD2, ubiquitin domain containing 2, [RH, Score=218, Expect=9e-71]} {Mouse: ENSMUSG00000044949, Ubtd2, ubiquitin domain containing 2, [RH, Score=219, Expect=2e-71]} {Dmel: FBgn0264712, CG1172, [RH, Score=194, Expect=2e-61]} {Smed: dd_Smed_v6_3009_0_1, dd_Smed_v6_3009_0_1, [RH, Score=198, Expect=4e-63]} {RNA1509_42408} {RNA1310_33971} {RNA815_34971}