TomoSeq data search

Data search

Results for MligTC455_42715

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42715

896

18.66

Mlig455_059530

Neo: -

Age: logFC(26M/2M)=-0.188

SUGP1

Mlig455_059530 {REF} {Length: 2371} {TRANSSPLICED} {Pfam: G-patch domain [PF01585.25, score=49.4]; G-patch domain [PF12656.9, score=23.8]} {Human: ENSG00000105705, SUGP1, SURP and G-patch domain containing 1, [RH, Score=225, Expect=1e-66]} {Mouse: ENSMUSG00000011306, Sugp1, SURP and G patch domain containing 1, [RH, Score=227, Expect=2e-67]} {Dmel: FBgn0051550, CG31550, [RH, Score=203, Expect=1e-57]} {Celegans: WBGene00020346, rbm-5, RNA Binding Motif protein homolog, [Score=48.1, Expect=1e-05]} {Smed: dd_Smed_v6_3010_0_1, dd_Smed_v6_3010_0_1, [RH, Score=296, Expect=9e-96]} {RNA1509_17647, RNA1509_31358} {RNA1310_20053, RNA1509_17647} {RNA1509_17647, RNA815_9041}

Cumulative graph for MligTC455_42715

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.75	4.466	0.30731	0.95614
RegionR2	-0.264	4.466	0.46684	0.85283
RegionR3	-0.027	4.466	0.92155	1.00000
RegionR4	0.213	4.466	0.52128	0.84618
RegionR5	0.3	4.466	0.21187	0.50888
RegionR6	-0.343	4.466	0.23733	0.82098
RegionR7	-0.531	4.466	0.18114	0.77884
RegionR8	-0.099	4.466	0.82446	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.765	4.466	0.02107	0.57676
RegenerationR2	-0.273	4.466	0.39352	0.81058
RegenerationR3	-0.087	4.466	0.79329	0.98003
RegenerationR4	-0.271	4.466	0.42633	0.82874
RegenerationR5	-0.14	4.466	0.63515	0.92458
RegenerationR6	0.464	4.466	0.18695	0.52359
RegenerationBL	0.488	4.466	0.26160	0.61981
RegenerationTP	0.026	4.466	0.95677	1.00000

Genes with expression patterns similar to MligTC455_42715

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42715	896	18.66	Mlig455_059530	Neo: - Age: logFC(26M/2M)=-0.188	SUGP1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_059530 {REF} {Length: 2371} {TRANSSPLICED} {Pfam: G-patch domain [PF01585.25, score=49.4]; G-patch domain [PF12656.9, score=23.8]} {Human: ENSG00000105705, SUGP1, SURP and G-patch domain containing 1, [RH, Score=225, Expect=1e-66]} {Mouse: ENSMUSG00000011306, Sugp1, SURP and G patch domain containing 1, [RH, Score=227, Expect=2e-67]} {Dmel: FBgn0051550, CG31550, [RH, Score=203, Expect=1e-57]} {Celegans: WBGene00020346, rbm-5, RNA Binding Motif protein homolog, [Score=48.1, Expect=1e-05]} {Smed: dd_Smed_v6_3010_0_1, dd_Smed_v6_3010_0_1, [RH, Score=296, Expect=9e-96]} {RNA1509_17647, RNA1509_31358} {RNA1310_20053, RNA1509_17647} {RNA1509_17647, RNA815_9041}
2.	MligTC455_32550	924	19.24	Mlig455_019608	Neo: - Age: Down-Down-Up	KAT8	1.785	-	-	-	0.832	-	0.953	Mlig455_019608 {REF} {Length: 2694} {TRANSSPLICED} {Pfam: MOZ/SAS family [PF01853.20, score=270.3]} {Human: ENSG00000103510, KAT8, lysine acetyltransferase 8, [Score=299, Expect=2e-99]} {Mouse: ENSMUSG00000030801, Kat8, K(lysine) acetyltransferase 8, [Score=298, Expect=2e-99]} {Dmel: FBgn0014340, mof, males absent on the first, [Score=281, Expect=5e-89]} {Celegans: WBGene00010537, mys-2, Histone acetyltransferase, [Score=236, Expect=7e-75]} {Smed: dd_Smed_v6_10027_0_1, dd_Smed_v6_10027_0_1, [Score=288, Expect=3e-96]} {RNA1509_14301} {RNA1310_7249.1} {RNA815_4204.1}
3.	MligTC455_44493	888	18.5	Mlig455_065072	Neo: - Age: logFC(26M/2M)=-0.289 Region-enriched R4: 1.237/0.02387 Region-enriched R5: 1.023/0.01167	GYG2	1.688	-	-	0.952	0.736	-	-	Mlig455_065072 {REF} {Length: 3182} {Pfam: Glycosyl transferase family 8 [PF01501.22, score=38.6]; Nucleotide-diphospho-sugar transferase [PF03407.18, score=21.0]} {Human: ENSG00000056998, GYG2, glycogenin 2, [Score=160, Expect=4e-42]} {Mouse: ENSMUSG00000019528, Gyg, glycogenin, [Score=152, Expect=2e-40]} {Dmel: FBgn0265191, Glycogenin, [Score=152, Expect=1e-41]} {Celegans: WBGene00006863, gyg-1, Glycogenin-1, [Score=114, Expect=5e-28]} {Smed: dd_Smed_v6_647_1_1, dd_Smed_v6_647_1_1, [Score=158, Expect=2e-43]} {RNA1509_21977} {RNA1310_9192, RNA1509_21977} {RNA1509_21977, RNA815_6477}
4.	MligTC455_52913	139	2.9	Mlig455_032718	Neo: - Age: -		0.976	-	-	-	-	-	0.976	Mlig455_032718 {REF} {Length: 5383} {RNA1310_68685} {RNA815_58602}
5.	MligTC455_53271	514	10.71	Mlig455_069029	Neo: - Age: Down-Up-Up	SF3B4	0.966	-	-	-	-	-	0.966	Mlig455_069029 {REF} {Length: 1520} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=134.0]; RNA recognition motif [PF16367.7, score=32.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=21.3]} {Human: ENSG00000143368, SF3B4, splicing factor 3b subunit 4, [RH, Score=400, Expect=3e-138]} {Mouse: ENSMUSG00000068856, Sf3b4, splicing factor 3b, subunit 4, [RH, Score=401, Expect=2e-138]} {Dmel: FBgn0015818, Spx, Spliceosomal protein on the X, [RH, Score=387, Expect=4e-134]} {Celegans: WBGene00004723, sap-49, Splicing factor 3B subunit 4, [RH, Score=371, Expect=1e-127]} {Smed: dd_Smed_v6_3556_0_1, dd_Smed_v6_3556_0_1, [RH, Score=402, Expect=6e-141]} {RNA1509_11168} {RNA1310_45243, RNA1509_11168} {RNA1509_11168, RNA815_14059.2}
6.	MligTC455_36633	360	7.51	Mlig455_036310	Neo: - Age: - Region-enriched R5: 1.918/0.00847	UBAC2	0.958	-	-	-	-	-	0.958	Mlig455_036310 {REF} {Length: 2211} {TRANSSPLICED} {Pfam: UBA/TS-N domain [PF00627.33, score=39.7]} {Human: ENSG00000134882, UBAC2, UBA domain containing 2, [RH, Score=162, Expect=7e-47]} {Mouse: ENSMUSG00000041765, Ubac2, ubiquitin associated domain containing 2, [RH, Score=155, Expect=1e-44]} {Smed: dd_Smed_v6_7267_0_1, dd_Smed_v6_7267_0_1, [RH, Score=164, Expect=5e-49]} {RNA1509_24042} {RNA1310_37732, RNA1509_24042} {RNA1509_24042, RNA815_24615}
7.	MligTC455_21917	794	16.55	Mlig455_036058	Neo: - Age: Down-Down-Up		0.951	-	-	-	-	0.951	-	Mlig455_036058 {REF} {Length: 3485} {RNA1509_16616} {RNA1310_3827.2} {RNA815_1424.1}

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