TomoSeq data search

Data search

Results for MligTC455_42748

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42748

1165

24.28

Mlig455_050528, Mlig455_050538, Mlig455_070774

Neo: -

Age: -

DTNBP1

Mlig455_050528 {REF} {Length: 2094} {TRANSSPLICED} {Human: ENSG00000047579, DTNBP1, dystrobrevin binding protein 1, [RH, Score=91.7, Expect=2e-20]} {Mouse: ENSMUSG00000057531, Dtnbp1, dystrobrevin binding protein 1, [RH, Score=65.9, Expect=1e-11]} {Dmel: FBgn0036819, Dysb, Dysbindin, [RH, Score=82.0, Expect=2e-17]} {RNA1509_21582, RNA1509_30267, RNA1509_52654} {RNA1310_19277, RNA1509_30267, RNA1509_52654} {RNA1509_30267, RNA1509_52654, RNA815_23179}

Mlig455_050538 {REF} {Length: 2618} {TRANSSPLICED} {Human: ENSG00000047579, DTNBP1, dystrobrevin binding protein 1, [RH, Score=89.0, Expect=1e-19]} {Mouse: ENSMUSG00000057531, Dtnbp1, dystrobrevin binding protein 1, [RH, Score=64.7, Expect=2e-11]} {Dmel: FBgn0036819, Dysb, Dysbindin, [RH, Score=82.0, Expect=1e-17]} {RNA1509_21582} {RNA1310_19277} {RNA815_23179}

Mlig455_070774 {REF} {Length: 2154} {TRANSSPLICED} {Human: ENSG00000047579, DTNBP1, dystrobrevin binding protein 1, [RH, Score=89.7, Expect=1e-19]} {Mouse: ENSMUSG00000057531, Dtnbp1, dystrobrevin binding protein 1, [RH, Score=64.7, Expect=3e-11]} {Dmel: FBgn0036819, Dysb, Dysbindin, [RH, Score=81.6, Expect=2e-17]} {RNA1509_21582, RNA1509_49655} {RNA1310_19277, RNA1509_21582, RNA1509_49655} {RNA1509_21582, RNA1509_49655, RNA815_23179}

Cumulative graph for MligTC455_42748

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.242	4.812	0.76692	1.00000
RegionR2	-0.043	4.812	0.92506	1.00000
RegionR3	0.377	4.812	0.30234	0.84425
RegionR4	-0.319	4.812	0.45741	0.78550
RegionR5	0.679	4.812	0.03640	0.14884
RegionR6	0.244	4.812	0.50455	1.00000
RegionR7	-1.148	4.812	0.01784	0.24544
RegionR8	0.452	4.812	0.31692	0.94967

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.392	4.812	0.04306	0.67581
RegenerationR2	0.231	4.812	0.58545	0.90871
RegenerationR3	0.027	4.812	0.95067	1.00000
RegenerationR4	0.572	4.812	0.21346	0.66039
RegenerationR5	-0.295	4.812	0.47550	0.84447
RegenerationR6	0.133	4.812	0.76465	0.95863
RegenerationBL	-0.992	4.812	0.08980	0.35124
RegenerationTP	-0.203	4.812	0.71393	1.00000

Genes with expression patterns similar to MligTC455_42748

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42748	1165	24.28	Mlig455_050528, Mlig455_050538, Mlig455_070774	Neo: - Age: -	DTNBP1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_050528 {REF} {Length: 2094} {TRANSSPLICED} {Human: ENSG00000047579, DTNBP1, dystrobrevin binding protein 1, [RH, Score=91.7, Expect=2e-20]} {Mouse: ENSMUSG00000057531, Dtnbp1, dystrobrevin binding protein 1, [RH, Score=65.9, Expect=1e-11]} {Dmel: FBgn0036819, Dysb, Dysbindin, [RH, Score=82.0, Expect=2e-17]} {RNA1509_21582, RNA1509_30267, RNA1509_52654} {RNA1310_19277, RNA1509_30267, RNA1509_52654} {RNA1509_30267, RNA1509_52654, RNA815_23179} Mlig455_050538 {REF} {Length: 2618} {TRANSSPLICED} {Human: ENSG00000047579, DTNBP1, dystrobrevin binding protein 1, [RH, Score=89.0, Expect=1e-19]} {Mouse: ENSMUSG00000057531, Dtnbp1, dystrobrevin binding protein 1, [RH, Score=64.7, Expect=2e-11]} {Dmel: FBgn0036819, Dysb, Dysbindin, [RH, Score=82.0, Expect=1e-17]} {RNA1509_21582} {RNA1310_19277} {RNA815_23179} Mlig455_070774 {REF} {Length: 2154} {TRANSSPLICED} {Human: ENSG00000047579, DTNBP1, dystrobrevin binding protein 1, [RH, Score=89.7, Expect=1e-19]} {Mouse: ENSMUSG00000057531, Dtnbp1, dystrobrevin binding protein 1, [RH, Score=64.7, Expect=3e-11]} {Dmel: FBgn0036819, Dysb, Dysbindin, [RH, Score=81.6, Expect=2e-17]} {RNA1509_21582, RNA1509_49655} {RNA1310_19277, RNA1509_21582, RNA1509_49655} {RNA1509_21582, RNA1509_49655, RNA815_23179}
2.	MligTC455_46282	1935	40.32	Mlig455_010437	Neo: - Age: -	NIPSNAP2	1.791	-	-	-	0.831	-	0.960	Mlig455_010437 {REF} {Length: 2903} {Pfam: NIPSNAP [PF07978.15, score=131.0]} {Human: ENSG00000146729, NIPSNAP2, nipsnap homolog 2, [RH, Score=210, Expect=9e-67]; ENSG00000184117, NIPSNAP1, nipsnap homolog 1, [RH, Score=202, Expect=9e-64]} {Mouse: ENSMUSG00000029432, Nipsnap2, nipsnap homolog 2, [RH, Score=206, Expect=2e-65]; ENSMUSG00000034285, Nipsnap1, nipsnap homolog 1, [RH, Score=201, Expect=1e-63]} {Dmel: FBgn0030724, Nipsnap, [RH, Score=212, Expect=3e-68]} {Smed: dd_Smed_v6_2078_0_1, dd_Smed_v6_2078_0_1, [RH, Score=244, Expect=7e-81]} {RNA1509_43562} {RNA1310_34826} {RNA815_4580.1}
3.	MligTC455_51219	114	2.37	Mlig455_064750	Neo: Irradiation Age: Up-Down-Down	TUT4	0.957	-	-	-	-	0.957	-	Mlig455_064750 {REF} {Length: 5880} {TRANSSPLICED} {Pfam: TUTase nucleotidyltransferase domain [PF19088.2, score=134.3]; Cid1 family poly A polymerase [PF03828.21, score=54.0]} {Human: ENSG00000134744, TUT4, terminal uridylyl transferase 4, [Score=367, Expect=3e-105]} {Mouse: ENSMUSG00000034610, Tut4, terminal uridylyl transferase 4, [Score=360, Expect=7e-103]} {Dmel: FBgn0260780, wisp, wispy, [Score=109, Expect=9e-24]} {Celegans: WBGene00019629, cid-1, Caffeine Induced Death (S. pombe Cid) homolog, [RH, Score=208, Expect=3e-54]} {Smed: dd_Smed_v6_3589_0_1, dd_Smed_v6_3589_0_1, [Score=229, Expect=3e-61]} {RNA1509_52573, RNA1509_7764} {RNA1310_1212.1, RNA1509_52573, RNA1509_7764} {RNA1509_52573, RNA1509_7764, RNA815_8576.1}
4.	MligTC455_44386	437	9.1	Mlig455_012895	Neo: - Age: logFC(26M/2M)=-0.237	ITK	0.954	-	-	-	-	-	0.954	Mlig455_012895 {REF} {Length: 6093} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=267.7]; Protein kinase domain [PF00069.27, score=135.1]; SH2 domain [PF00017.26, score=82.8]; PH domain [PF00169.31, score=51.1]; BTK motif [PF00779.21, score=37.2]; SH3 domain [PF00018.30, score=32.1]; Variant SH3 domain [PF14604.8, score=28.1]; Variant SH3 domain [PF07653.19, score=19.5]} {Human: ENSG00000113263, ITK, IL2 inducible T cell kinase, [RH, Score=452, Expect=6e-151]; ENSG00000010671, BTK, Bruton tyrosine kinase, [RH, Score=450, Expect=2e-149]; ENSG00000135605, TEC, tec protein tyrosine kinase, [RH, Score=439, Expect=3e-145]} {Mouse: ENSMUSG00000031264, Btk, Bruton agammaglobulinemia tyrosine kinase, [RH, Score=450, Expect=2e-149]; ENSMUSG00000029217, Tec, tec protein tyrosine kinase, [RH, Score=439, Expect=1e-145]; ENSMUSG00000020395, Itk, IL2 inducible T cell kinase, [RH, Score=439, Expect=7e-146]} {Dmel: FBgn0003502, Btk29A, Btk family kinase at 29A, [RH, Score=439, Expect=7e-144]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=314, Expect=2e-99]} {Smed: dd_Smed_v6_4818_0_1, dd_Smed_v6_4818_0_1, [RH, Score=663, Expect=0.0]} {RNA1509_14118, RNA1509_20637, RNA1509_33645, RNA1509_41278, RNA1509_43358} {RNA1310_11225, RNA1509_14118, RNA1509_20637, RNA1509_33645, RNA1509_41278, RNA1509_43358} {RNA1509_14118, RNA1509_20637, RNA1509_33645, RNA1509_41278, RNA1509_43358, RNA815_1375.1}
5.	MligTC455_50713	1646	34.29	Mlig455_004991	Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.627 Region-enriched R5: 1.244/0.00002 Region-enriched R4: 1.149/0.00387	MAP1LC3C	0.952	-	-	-	-	-	0.952	Mlig455_004991 {REF} {Length: 1864} {TRANSSPLICED} {Pfam: Autophagy protein Atg8 ubiquitin like [PF02991.18, score=130.5]; Ubiquitin-like autophagy protein Apg12 [PF04110.15, score=20.0]} {Human: ENSG00000197769, MAP1LC3C, microtubule associated protein 1 light chain 3 gamma, [Score=150, Expect=4e-47]} {Mouse: ENSMUSG00000031812, Map1lc3b, microtubule-associated protein 1 light chain 3 beta, [Score=125, Expect=6e-38]; ENSMUSG00000027602, Map1lc3a, microtubule-associated protein 1 light chain 3 alpha, [Score=122, Expect=9e-37]} {Dmel: FBgn0052672, Atg8a, Autophagy-related 8a, [Score=98.6, Expect=2e-27]} {Celegans: WBGene00002981, lgg-2, [RH, Score=107, Expect=8e-31]} {Smed: dd_Smed_v6_1441_0_1, dd_Smed_v6_1441_0_1, [Score=104, Expect=9e-30]} {RNA1509_20665, RNA1509_27527, RNA1509_29537, RNA1509_44101} {RNA1310_32049.1, RNA1509_20665, RNA1509_27527, RNA1509_29537, RNA1509_44101} {RNA1509_20665, RNA1509_27527, RNA1509_29537, RNA1509_44101, RNA815_14707}

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