TomoSeq data search

Data search

Results for MligTC455_42816

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_42816	746	15.53	Mlig455_010662	Neo: - Age: Down-Up-Down		Mlig455_010662 {REF} {Length: 1948} {RNA1509_30731, RNA1509_40046} {RNA1310_31538.1, RNA1509_30731, RNA1509_40046} {RNA1509_30731, RNA1509_40046, RNA815_27194}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_42816

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.62	4.152	0.22344	0.86713
RegionR2	0.875	4.152	0.08751	0.36340
RegionR3	-0.618	4.152	0.20126	0.74079
RegionR4	-0.575	4.152	0.29051	0.60133
RegionR5	0.252	4.152	0.54665	0.90851
RegionR6	0.421	4.152	0.33962	0.92704
RegionR7	1.104	4.152	0.01798	0.24614
RegionR8	0.16	4.152	0.79858	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.076	4.152	0.54371	1.00000
RegenerationR2	-1.705	4.152	0.00042	0.02780
RegenerationR3	-0.565	4.152	0.29874	0.72996
RegenerationR4	0.279	4.152	0.59016	0.90902
RegenerationR5	0.642	4.152	0.17648	0.60608
RegenerationR6	-0.352	4.152	0.50189	0.80743
RegenerationBL	-1.562	4.152	0.01126	0.10803
RegenerationTP	-0.282	4.152	0.61677	0.97045

Genes with expression patterns similar to MligTC455_42816

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42816	746	15.53	Mlig455_010662	Neo: - Age: Down-Up-Down	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_010662 {REF} {Length: 1948} {RNA1509_30731, RNA1509_40046} {RNA1310_31538.1, RNA1509_30731, RNA1509_40046} {RNA1509_30731, RNA1509_40046, RNA815_27194}
2.	MligTC455_42817	1063	22.15	Mlig455_010757	Neo: - Age: -	4.488	0.977	0.967	0.843	0.776	-	0.925	Mlig455_010757 {REF} {Length: 770} {RNA1509_24400, RNA1509_30731} {RNA1310_31538.1, RNA1509_24400} {RNA1509_24400, RNA815_27194}
3.	MligTC455_20686	474	9.88	Mlig455_041407, Mlig455_041444, Mlig455_060901	Neo: - Age: - Region-enriched R2: 1.932/0.02120	0.957	0.957	-	-	-	-	-	Mlig455_041407 {REF} {Length: 1387} {Smed: dd_Smed_v6_12479_0_1, dd_Smed_v6_12479_0_1, [RH, Score=73.6, Expect=3e-17]} {RNA1509_36978} {RNA1310_41260} {RNA815_26996} Mlig455_041444 {REF} {Length: 935} {Smed: dd_Smed_v6_12479_0_1, dd_Smed_v6_12479_0_1, [RH, Score=73.6, Expect=4e-17]} {RNA1509_36978} {RNA1310_41260} {RNA815_47140} Mlig455_060901 {REF} {Length: 2316} {Smed: dd_Smed_v6_12479_0_1, dd_Smed_v6_12479_0_1, [RH, Score=73.6, Expect=3e-17]} {RNA1509_36978} {RNA1310_41260} {RNA815_47140}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_42816

746

15.53

Mlig455_010662

Neo: -

Age: Down-Up-Down

1.000

Mlig455_010662 {REF} {Length: 1948} {RNA1509_30731, RNA1509_40046} {RNA1310_31538.1, RNA1509_30731, RNA1509_40046} {RNA1509_30731, RNA1509_40046, RNA815_27194}

MligTC455_42817

1063

22.15

Mlig455_010757

Neo: -

Age: -

4.488

0.977

0.967

0.843

0.776

0.925

Mlig455_010757 {REF} {Length: 770} {RNA1509_24400, RNA1509_30731} {RNA1310_31538.1, RNA1509_24400} {RNA1509_24400, RNA815_27194}

MligTC455_20686

474

9.88

Mlig455_041407, Mlig455_041444, Mlig455_060901

Neo: -

Age: -

Region-enriched R2: 1.932/0.02120

0.957

Mlig455_041407 {REF} {Length: 1387} {Smed: dd_Smed_v6_12479_0_1, dd_Smed_v6_12479_0_1, [RH, Score=73.6, Expect=3e-17]} {RNA1509_36978} {RNA1310_41260} {RNA815_26996}

Mlig455_041444 {REF} {Length: 935} {Smed: dd_Smed_v6_12479_0_1, dd_Smed_v6_12479_0_1, [RH, Score=73.6, Expect=4e-17]} {RNA1509_36978} {RNA1310_41260} {RNA815_47140}

Mlig455_060901 {REF} {Length: 2316} {Smed: dd_Smed_v6_12479_0_1, dd_Smed_v6_12479_0_1, [RH, Score=73.6, Expect=3e-17]} {RNA1509_36978} {RNA1310_41260} {RNA815_47140}