Data search
Results for MligTC455_42837
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42837 | 1646 | 34.29 | Mlig455_060370 | Neo: - Age: Down-Up-Up |
PRCC | Mlig455_060370 {REF} {Length: 1502} {TRANSSPLICED} {Pfam: Mitotic checkpoint regulator, MAD2B-interacting [PF10253.11, score=62.9]} {Human: ENSG00000143294, PRCC, proline rich mitotic checkpoint control factor, [RH, Score=88.6, Expect=1e-18]} {Mouse: ENSMUSG00000004895, Prcc, papillary renal cell carcinoma (translocation-associated), [RH, Score=89.0, Expect=6e-19]} {Dmel: FBgn0035249, CG17249, [RH, Score=55.5, Expect=3e-08]} {Celegans: WBGene00008034, C39E9.11, [RH, Score=55.8, Expect=2e-08]} {Smed: dd_Smed_v6_5614_0_1, dd_Smed_v6_5614_0_1, [RH, Score=52.8, Expect=8e-08]} {RNA1509_11157, RNA1509_37704} {RNA1310_20028.1, RNA1509_11157, RNA1509_37704} {RNA1509_11157, RNA1509_37704, RNA815_9588} |
Cumulative graph for MligTC455_42837
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.269 | 5.264 | 0.01073 | 0.30220 | |
| RegionR2 | -0.005 | 5.264 | 0.99150 | 1.00000 | |
| RegionR3 | 0.168 | 5.264 | 0.58620 | 1.00000 | |
| RegionR4 | 0.223 | 5.264 | 0.51313 | 0.83905 | |
| RegionR5 | 0.484 | 5.264 | 0.08686 | 0.27710 | |
| RegionR6 | 0.218 | 5.264 | 0.48071 | 1.00000 | |
| RegionR7 | 0.338 | 5.264 | 0.34854 | 0.98573 | |
| RegionR8 | 0.841 | 5.264 | 0.03344 | 0.35912 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.009 | 5.264 | 0.99626 | 1.00000 | |
| RegenerationR2 | 0.008 | 5.264 | 0.98077 | 1.00000 | |
| RegenerationR3 | -0.372 | 5.264 | 0.27612 | 0.70982 | |
| RegenerationR4 | -0.076 | 5.264 | 0.82418 | 0.99545 | |
| RegenerationR5 | -0.226 | 5.264 | 0.48111 | 0.84686 | |
| RegenerationR6 | 0.166 | 5.264 | 0.62814 | 0.88558 | |
| RegenerationBL | 0.135 | 5.264 | 0.69172 | 1.00000 | |
| RegenerationTP | -0.404 | 5.264 | 0.29192 | 0.73697 |
Genes with expression patterns similar to MligTC455_42837
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42837 | 1646 | 34.29 | Mlig455_060370 | Neo: - Age: Down-Up-Up |
PRCC | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_060370 {REF} {Length: 1502} {TRANSSPLICED} {Pfam: Mitotic checkpoint regulator, MAD2B-interacting [PF10253.11, score=62.9]} {Human: ENSG00000143294, PRCC, proline rich mitotic checkpoint control factor, [RH, Score=88.6, Expect=1e-18]} {Mouse: ENSMUSG00000004895, Prcc, papillary renal cell carcinoma (translocation-associated), [RH, Score=89.0, Expect=6e-19]} {Dmel: FBgn0035249, CG17249, [RH, Score=55.5, Expect=3e-08]} {Celegans: WBGene00008034, C39E9.11, [RH, Score=55.8, Expect=2e-08]} {Smed: dd_Smed_v6_5614_0_1, dd_Smed_v6_5614_0_1, [RH, Score=52.8, Expect=8e-08]} {RNA1509_11157, RNA1509_37704} {RNA1310_20028.1, RNA1509_11157, RNA1509_37704} {RNA1509_11157, RNA1509_37704, RNA815_9588} |
| 2. | MligTC455_42421 | 451 | 9.4 | Mlig455_014113 | Neo: - Age: - |
1.796 | - | - | 0.846 | 0.950 | - | - | Mlig455_014113 {REF} {Length: 3365} {RNA1509_22432} {RNA1310_7691.1, RNA1509_22432} {RNA1509_22432, RNA815_2712.1} | |
| 3. | MligTC455_17758 | 540 | 11.26 | Mlig455_070368 | Neo: - Age: Down-Up-Up Region-enriched R4: 2.221/0.03649 |
NOTCH1 | 0.967 | - | - | - | 0.967 | - | - | Mlig455_070368 {REF} {Length: 1662} {Pfam: EGF-like domain [PF00008.29, score=25.4]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=49.7, Expect=3e-06]; ENSG00000232339, NOTCH4, notch 4, [Score=49.3, Expect=5e-06]; ENSG00000206312, NOTCH4, notch 4, [Score=49.3, Expect=5e-06]; ENSG00000234876, NOTCH4, notch 4, [Score=49.3, Expect=5e-06]; ENSG00000235396, NOTCH4, notch 4, [Score=49.3, Expect=5e-06]; ENSG00000223355, NOTCH4, notch 4, [Score=49.3, Expect=5e-06]; ENSG00000204301, NOTCH4, notch 4, [Score=49.3, Expect=5e-06]; ENSG00000074181, NOTCH3, notch 3, [Score=48.5, Expect=9e-06]; ENSG00000148204, CRB2, crumbs 2, cell polarity complex component, [Score=47.8, Expect=1e-05]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=54.7, Expect=6e-08]} {Dmel: FBgn0259140, CG42255, [Score=53.1, Expect=1e-07]} {RNA1509_35684} {RNA1310_18308} {RNA815_10194.1} |
| 4. | MligTC455_21585 | 922 | 19.22 | Mlig455_006776 | Neo: - Age: Up-Down-Down |
PAFAH1B1 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_006776 {REF} {Length: 4438} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=214.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=61.9]; Nucleoporin Nup120/160 [PF11715.10, score=26.6]; LisH [PF08513.13, score=25.6]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=23.8]; Nup133 N terminal like [PF08801.13, score=21.7]} {Human: ENSG00000007168, PAFAH1B1, platelet activating factor acetylhydrolase 1b regulatory subunit 1, [RH, Score=592, Expect=0.0]} {Mouse: ENSMUSG00000020745, Pafah1b1, platelet-activating factor acetylhydrolase, isoform 1b, subunit 1, [RH, Score=592, Expect=0.0]} {Dmel: FBgn0015754, Lis-1, Lissencephaly-1, [RH, Score=560, Expect=0.0]} {Celegans: WBGene00003047, lis-1, Lissencephaly-1 homolog, [RH, Score=481, Expect=1e-169]} {Smed: dd_Smed_v6_3359_0_1, dd_Smed_v6_3359_0_1, [RH, Score=528, Expect=0.0]} {RNA1509_19057, RNA1509_26707} {RNA1310_18546, RNA1509_19057, RNA1509_26707} {RNA1509_19057, RNA1509_26707, RNA815_9438} |
| 5. | MligTC455_39475 | 347 | 7.22 | Mlig455_027043 | Neo: - Age: - |
RBM25 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_027043 {REF} {Length: 2790} {TRANSSPLICED} {Pfam: PWI domain [PF01480.19, score=46.6]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=19.8]} {Human: ENSG00000119707, RBM25, RNA binding motif protein 25, [RH, Score=176, Expect=2e-45]} {Mouse: ENSMUSG00000010608, Rbm25, RNA binding motif protein 25, [RH, Score=175, Expect=1e-45]} {Dmel: FBgn0028474, CG4119, [RH, Score=147, Expect=3e-36]} {Celegans: WBGene00012245, W04D2.6, [RH, Score=177, Expect=6e-47]} {Smed: dd_Smed_v6_3955_0_1, dd_Smed_v6_3955_0_1, [RH, Score=317, Expect=3e-98]} {RNA1509_3647} {RNA1310_5380} {RNA815_1824.1} |
| 6. | MligTC455_23015 | 246 | 5.13 | Mlig455_044423 | Neo: - Age: - |
ACTR10 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_044423 {REF} {Length: 2401} {Pfam: Actin [PF00022.21, score=165.6]} {Human: ENSG00000131966, ACTR10, actin related protein 10 homolog, [RH, Score=330, Expect=1e-109]} {Mouse: ENSMUSG00000021076, Actr10, ARP10 actin-related protein 10, [RH, Score=333, Expect=4e-111]} {Dmel: FBgn0031050, Arp10, Actin-related protein 10, [RH, Score=270, Expect=3e-87]} {Celegans: WBGene00016793, arp-11, Actin-Related Proteins, [RH, Score=139, Expect=3e-37]} {Smed: dd_Smed_v6_2141_0_3, dd_Smed_v6_2141_0_3, [RH, Score=276, Expect=3e-89]} {RNA1509_14893} {RNA1310_14286} {RNA815_22726} |
| 7. | MligTC455_39362 | 1158 | 24.13 | Mlig455_069375 | Neo: - Age: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_069375 {REF} {Length: 2263} {TRANSSPLICED} {RNA1509_21193} {RNA1310_18941} {RNA815_22823} | |
| 8. | MligTC455_05842 | 494 | 10.29 | Mlig455_034411 | Neo: - Age: logFC(26M/2M)=-0.368 |
STK38 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_034411 {REF} {Length: 2305} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=208.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=101.7]; ABC1 atypical kinase-like domain [PF03109.18, score=30.5]; Kinase-like [PF14531.8, score=18.0]} {Human: ENSG00000112079, STK38, serine/threonine kinase 38, [RH, Score=626, Expect=0.0]} {Mouse: ENSMUSG00000024006, Stk38, serine/threonine kinase 38, [RH, Score=620, Expect=0.0]} {Dmel: FBgn0003744, trc, tricornered, [RH, Score=615, Expect=0.0]} {Celegans: WBGene00004727, sax-1, Serine/threonine-protein kinase sax-1, [RH, Score=558, Expect=0.0]} {Smed: dd_Smed_v6_6462_0_1, dd_Smed_v6_6462_0_1, [RH, Score=646, Expect=0.0]} {RNA1509_32122} {RNA1310_3307} {RNA815_3142.1} |
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