TomoSeq data search

Data search

Results for MligTC455_42894

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42894

942

19.63

Mlig455_007293

Neo: Neoblast, stringent

Age: -

CAPRIN1

Mlig455_007293 {REF} {Length: 2393} {Pfam: Caprin-1 dimerization domain [PF18293.3, score=49.5]} {Human: ENSG00000135387, CAPRIN1, cell cycle associated protein 1, [Score=110, Expect=3e-25]} {Mouse: ENSMUSG00000027184, Caprin1, cell cycle associated protein 1, [Score=108, Expect=1e-24]} {Dmel: FBgn0042134, Capr, Caprin, [Score=77.4, Expect=8e-15]} {Smed: dd_Smed_v6_936_0_1, dd_Smed_v6_936_0_1, [Score=58.2, Expect=4e-09]} {RNA1509_22579} {RNA1310_10313} {RNA815_12401.1}

Cumulative graph for MligTC455_42894

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.814	4.625	0.35990	1.00000
RegionR2	0.569	4.625	0.25514	0.63537
RegionR3	0.131	4.625	0.73081	1.00000
RegionR4	-0.031	4.625	0.94106	1.00000
RegionR5	0.642	4.625	0.04719	0.18001
RegionR6	0.214	4.625	0.57605	1.00000
RegionR7	-1.044	4.625	0.04529	0.40851
RegionR8	0.332	4.625	0.53510	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.692	4.625	0.22902	0.95946
RegenerationR2	0.351	4.625	0.42876	0.83317
RegenerationR3	1.152	4.625	0.01566	0.22872
RegenerationR4	0.602	4.625	0.20060	0.64677
RegenerationR5	-0.174	4.625	0.68726	0.94680
RegenerationR6	1.318	4.625	0.00381	0.07333
RegenerationBL	1.184	4.625	0.02625	0.17852
RegenerationTP	0.575	4.625	0.35163	0.79318

Genes with expression patterns similar to MligTC455_42894

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42894	942	19.63	Mlig455_007293	Neo: Neoblast, stringent Age: -	CAPRIN1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_007293 {REF} {Length: 2393} {Pfam: Caprin-1 dimerization domain [PF18293.3, score=49.5]} {Human: ENSG00000135387, CAPRIN1, cell cycle associated protein 1, [Score=110, Expect=3e-25]} {Mouse: ENSMUSG00000027184, Caprin1, cell cycle associated protein 1, [Score=108, Expect=1e-24]} {Dmel: FBgn0042134, Capr, Caprin, [Score=77.4, Expect=8e-15]} {Smed: dd_Smed_v6_936_0_1, dd_Smed_v6_936_0_1, [Score=58.2, Expect=4e-09]} {RNA1509_22579} {RNA1310_10313} {RNA815_12401.1}
2.	MligTC455_50471	2045	42.6	Mlig455_014184, Mlig455_014206	Neo: Neoblast Age: Down-Up-Up	DDX47	1.797	-	-	-	0.845	-	0.952	Mlig455_014184 {REF} {Length: 1814} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=102.3]; DEAD/DEAH box helicase [PF00270.31, score=77.4]} {Human: ENSG00000213782, DDX47, DEAD-box helicase 47, [Score=404, Expect=2e-135]} {Mouse: ENSMUSG00000030204, Ddx47, DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, [Score=406, Expect=3e-136]} {Dmel: FBgn0032919, CG9253, [Score=402, Expect=3e-134]} {Celegans: WBGene00012059, T26G10.1, Putative ATP-dependent RNA helicase T26G10.1, [Score=369, Expect=1e-121]} {Smed: dd_Smed_v6_3384_0_1, dd_Smed_v6_3384_0_1, [Score=259, Expect=6e-80]} {RNA1509_30912} {RNA1310_18278} {RNA815_16.1} Mlig455_014206 {REF} {Length: 1651} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=164.1]; Helicase conserved C-terminal domain [PF00271.33, score=108.2]; Type III restriction enzyme, res subunit [PF04851.17, score=29.3]; AAA domain [PF13245.8, score=25.2]} {Human: ENSG00000213782, DDX47, DEAD-box helicase 47, [RH, Score=528, Expect=0.0]} {Mouse: ENSMUSG00000030204, Ddx47, DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, [RH, Score=530, Expect=0.0]} {Dmel: FBgn0032919, CG9253, [RH, Score=529, Expect=0.0]} {Celegans: WBGene00012059, T26G10.1, Putative ATP-dependent RNA helicase T26G10.1, [RH, Score=483, Expect=2e-168]} {Smed: dd_Smed_v6_3384_0_1, dd_Smed_v6_3384_0_1, [RH, Score=373, Expect=1e-125]} {RNA1509_30912, RNA1509_6396} {RNA1310_18278, RNA1509_30912, RNA1509_6396} {RNA1509_30912, RNA1509_6396, RNA815_16.1}
3.	MligTC455_38272	348	7.25	Mlig455_062529	Neo: - Age: -		0.976	-	-	-	0.976	-	-	Mlig455_062529 {REF} {Length: 2667} {TRANSSPLICED} {RNA1509_9143} {RNA1310_8524} {RNA815_2383}
4.	MligTC455_41022	415	8.64	Mlig455_063522	Neo: - Age: -	HS6ST2	0.958	-	-	-	0.958	-	-	Mlig455_063522 {REF} {Length: 3850} {TRANSSPLICED} {Pfam: Sulfotransferase family [PF03567.16, score=41.9]} {Human: ENSG00000171004, HS6ST2, heparan sulfate 6-O-sulfotransferase 2, [RH, Score=214, Expect=5e-63]} {Mouse: ENSMUSG00000062184, Hs6st2, heparan sulfate 6-O-sulfotransferase 2, [RH, Score=213, Expect=8e-63]} {Dmel: FBgn0038755, Hs6st, Heparan sulfate 6-O-sulfotransferase, [Score=204, Expect=4e-61]} {Celegans: WBGene00002031, hst-6, Heparan 6-O sulfotransferase HST-6; Heparan SulphoTransferase, [Score=169, Expect=1e-48]} {Smed: dd_Smed_v6_12242_0_2, dd_Smed_v6_12242_0_2, [RH, Score=208, Expect=3e-63]} {RNA1509_30525, RNA1509_37370, RNA1509_39192} {RNA1310_13145.1, RNA1509_30525, RNA1509_37370, RNA1509_39192} {RNA1509_30525, RNA1509_37370, RNA1509_39192, RNA815_14951.1}
5.	MligTC455_22171	1082	22.54	Mlig455_029400	Neo: Int S/G2/M Age: Down-Down-Up	CPSF2	0.953	-	-	-	0.953	-	-	Mlig455_029400 {REF} {Length: 2518} {Pfam: Metallo-beta-lactamase superfamily domain [PF16661.7, score=196.3]; Beta-Casp domain [PF10996.10, score=67.7]; Cleavage and polyadenylation factor 2 C-terminal [PF13299.8, score=58.1]; Zn-dependent metallo-hydrolase RNA specificity domain [PF07521.14, score=38.0]; Beta-lactamase superfamily domain [PF12706.9, score=22.2]; Metallo-beta-lactamase superfamily [PF00753.29, score=21.1]} {Human: ENSG00000165934, CPSF2, cleavage and polyadenylation specific factor 2, [RH, Score=485, Expect=1e-160]} {Mouse: ENSMUSG00000041781, Cpsf2, cleavage and polyadenylation specific factor 2, [RH, Score=609, Expect=0.0]} {Dmel: FBgn0027873, Cpsf100, Cleavage and polyadenylation specificity factor 100, [RH, Score=593, Expect=0.0]} {Celegans: WBGene00017313, cpsf-2, Probable cleavage and polyadenylation specificity factor subunit 2, [RH, Score=400, Expect=1e-127]} {Smed: dd_Smed_v6_5812_0_1, dd_Smed_v6_5812_0_1, [RH, Score=588, Expect=0.0]} {RNA1509_6127} {RNA1310_6453} {RNA815_10477}

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