TomoSeq data search

Data search

Results for MligTC455_42898

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42898

64

1.33

Mlig455_048942

Neo: -

Age: -

Region-enriched R4: 8.792/0.02566

RAB7A

Mlig455_048942 {REF} {Length: 2003} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=179.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=99.8]; ADP-ribosylation factor family [PF00025.23, score=50.3]; 50S ribosome-binding GTPase [PF01926.25, score=21.1]} {Human: ENSG00000075785, RAB7A, RAB7A, member RAS oncogene family, [Score=244, Expect=9e-82]} {Mouse: ENSMUSG00000079477, Rab7, RAB7, member RAS oncogene family, [Score=244, Expect=6e-82]} {Dmel: FBgn0015795, Rab7, [Score=235, Expect=2e-78]} {Celegans: WBGene00004271, rab-7, RAB family, [Score=239, Expect=7e-80]} {Smed: dd_Smed_v6_419_0_1, dd_Smed_v6_419_0_1, [Score=246, Expect=8e-83]} {RNA1509_50491} {RNA1310_12836.1, RNA1509_50491} {RNA1509_50491, RNA815_11838.2}

Cumulative graph for MligTC455_42898

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.027	1.583	0.99987	1.00000
RegionR2	-3.827	1.583	0.99987	1.00000
RegionR3	-1.361	1.583	0.99260	1.00000
RegionR4	8.792	1.583	0.00320	0.02566
RegionR5	1.533	1.583	0.37230	0.72551
RegionR6	-0.486	1.583	0.92491	1.00000
RegionR7	1.764	1.583	0.34788	0.98524
RegionR8	-3.389	1.583	0.99985	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.11	1.583	0.99979	1.00000
RegenerationR2	0.727	1.583	0.63868	0.93080
RegenerationR3	-1.53	1.583	0.53246	0.87361
RegenerationR4	-3.862	1.583	0.07984	0.44796
RegenerationR5	-0.642	1.583	0.65193	0.93305
RegenerationR6	-5.864	1.583	0.02944	0.21421
RegenerationBL	-2.259	1.583	0.98916	1.00000
RegenerationTP	-0.551	1.583	0.95777	1.00000

Genes with expression patterns similar to MligTC455_42898

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42898	64	1.33	Mlig455_048942	Neo: - Age: - Region-enriched R4: 8.792/0.02566	RAB7A	2	-	-	1.000	-	-	1.000	Mlig455_048942 {REF} {Length: 2003} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=179.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=99.8]; ADP-ribosylation factor family [PF00025.23, score=50.3]; 50S ribosome-binding GTPase [PF01926.25, score=21.1]} {Human: ENSG00000075785, RAB7A, RAB7A, member RAS oncogene family, [Score=244, Expect=9e-82]} {Mouse: ENSMUSG00000079477, Rab7, RAB7, member RAS oncogene family, [Score=244, Expect=6e-82]} {Dmel: FBgn0015795, Rab7, [Score=235, Expect=2e-78]} {Celegans: WBGene00004271, rab-7, RAB family, [Score=239, Expect=7e-80]} {Smed: dd_Smed_v6_419_0_1, dd_Smed_v6_419_0_1, [Score=246, Expect=8e-83]} {RNA1509_50491} {RNA1310_12836.1, RNA1509_50491} {RNA1509_50491, RNA815_11838.2}
2.	MligTC455_43006	267	5.55	Mlig455_000593, Mlig455_030391, Mlig455_069016	Neo: - Age: logFC(26M/2M)=-0.411	CCDC177	1.698	-	-	0.744	-	-	0.954	Mlig455_000593 {REF} {Length: 2095} {Human: ENSG00000267909, CCDC177, coiled-coil domain containing 177, [Score=70.9, Expect=1e-12]} {Mouse: ENSMUSG00000062961, Ccdc177, coiled-coil domain containing 177, [Score=64.7, Expect=8e-11]} {Smed: dd_Smed_v6_9816_0_1, dd_Smed_v6_9816_0_1, [Score=56.2, Expect=1e-08]} {RNA1509_53422} {RNA1310_19778, RNA1509_53422} {RNA1509_53422, RNA815_39052} Mlig455_030391 {REF} {Length: 2071} {Human: ENSG00000267909, CCDC177, coiled-coil domain containing 177, [Score=70.9, Expect=1e-12]} {Mouse: ENSMUSG00000062961, Ccdc177, coiled-coil domain containing 177, [Score=64.7, Expect=9e-11]} {Smed: dd_Smed_v6_9816_0_1, dd_Smed_v6_9816_0_1, [Score=56.2, Expect=1e-08]} {RNA1509_53422} {RNA1310_19778} {RNA815_39052} Mlig455_069016 {REF} {Length: 2124} {Human: ENSG00000267909, CCDC177, coiled-coil domain containing 177, [Score=71.2, Expect=1e-12]} {Mouse: ENSMUSG00000062961, Ccdc177, coiled-coil domain containing 177, [Score=64.7, Expect=8e-11]} {Smed: dd_Smed_v6_9816_0_1, dd_Smed_v6_9816_0_1, [Score=56.2, Expect=1e-08]} {RNA1509_53422} {RNA1310_19778} {RNA815_39052}
3.	MligTC455_45109	175	3.66	Mlig455_032630	Neo: - Age: logFC(26M/2M)=-0.824	MAPK7	0.966	-	-	-	-	-	0.966	Mlig455_032630 {REF} {Length: 2815} {Pfam: Protein kinase domain [PF00069.27, score=208.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=116.8]; ABC1 atypical kinase-like domain [PF03109.18, score=20.7]; Haspin like kinase domain [PF12330.10, score=19.7]} {Human: ENSG00000166484, MAPK7, mitogen-activated protein kinase 7, [Score=209, Expect=5e-58]; ENSG00000112062, MAPK14, mitogen-activated protein kinase 14, [Score=208, Expect=3e-61]; ENSG00000156711, MAPK13, mitogen-activated protein kinase 13, [Score=204, Expect=9e-60]; ENSG00000188130, MAPK12, mitogen-activated protein kinase 12, [Score=204, Expect=2e-59]; ENSG00000185386, MAPK11, mitogen-activated protein kinase 11, [Score=201, Expect=2e-58]} {Mouse: ENSMUSG00000022610, Mapk12, mitogen-activated protein kinase 12, [Score=214, Expect=9e-64]; ENSMUSG00000004864, Mapk13, mitogen-activated protein kinase 13, [Score=209, Expect=8e-62]; ENSMUSG00000001034, Mapk7, mitogen-activated protein kinase 7, [Score=209, Expect=3e-58]; ENSMUSG00000053436, Mapk14, mitogen-activated protein kinase 14, [Score=207, Expect=6e-61]} {Dmel: FBgn0015765, p38a, p38a MAP kinase, [Score=195, Expect=2e-56]} {Celegans: WBGene00003402, mpk-2, Mitogen-activated protein kinase, [Score=206, Expect=3e-60]} {Smed: dd_Smed_v6_4300_0_1, dd_Smed_v6_4300_0_1, [Score=202, Expect=5e-57]} {RNA1509_34513} {RNA1310_13913} {RNA815_4986}
4.	MligTC455_23283	80	1.67	Mlig455_066599	Neo: - Age: Down-Up-Down	ANK3	0.963	-	-	-	-	-	0.963	Mlig455_066599 {REF} {Length: 4070} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=141.8]; Ankyrin repeat [PF00023.32, score=109.1]; Ankyrin repeats (many copies) [PF13857.8, score=101.0]; Ankyrin repeats (many copies) [PF13637.8, score=99.3]; Ankyrin repeat [PF13606.8, score=84.8]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=98.6, Expect=4e-20]; ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=95.9, Expect=2e-19]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=96.3, Expect=1e-19]; ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=94.4, Expect=5e-19]; ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=92.4, Expect=2e-18]} {Dmel: FBgn0039590, CG10011, [Score=85.5, Expect=2e-16]} {Celegans: WBGene00012124, T28D6.4, [Score=80.1, Expect=6e-15]} {Smed: dd_Smed_v6_10835_0_2, dd_Smed_v6_10835_0_2, [Score=79.0, Expect=1e-14]} {RNA1509_12495} {RNA1310_2494.1} {RNA815_704.1}
5.	MligTC455_15248	248	5.17	Mlig455_066734	Neo: - Age: -	RBM12	0.959	-	-	-	-	-	0.959	Mlig455_066734 {REF} {Length: 4367} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=27.4]} {Human: ENSG00000244462, RBM12, RNA binding motif protein 12, [Score=94.0, Expect=6e-19]; ENSG00000183808, RBM12B, RNA binding motif protein 12B, [Score=89.7, Expect=1e-17]} {Mouse: ENSMUSG00000089824, Rbm12, RNA binding motif protein 12, [Score=94.7, Expect=2e-19]; ENSMUSG00000098950, Gm28036, predicted gene, 28036, [Score=92.8, Expect=7e-19]} {Dmel: FBgn0035235, CG7879, [RH, Score=118, Expect=9e-27]} {Celegans: WBGene00013703, Y106G6D.7, [RH, Score=96.7, Expect=4e-20]} {Smed: dd_Smed_v6_5908_0_1, dd_Smed_v6_5908_0_1, [RH, Score=108, Expect=5e-24]} {RNA1509_37534, RNA1509_56537, RNA1509_7941} {RNA1310_4040.1, RNA1509_37534, RNA1509_56537, RNA1509_7941} {RNA1509_37534, RNA1509_56537, RNA1509_7941, RNA815_10772}
6.	MligTC455_15250	145	3.01	Mlig455_066748	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_066748 {REF} {Length: 647} {NoTransDecoderORF} {RNA1509_52333, RNA1509_55685, RNA1509_56537} {RNA1310_27819, RNA1509_52333, RNA1509_55685} {RNA1509_52333, RNA1509_55685, RNA815_25553}

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