TomoSeq data search

Data search

Results for MligTC455_42904

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42904

22

0.46

Mlig455_020355

Neo: -

Age: -

Mlig455_020355 {REF} {Length: 960} {RNA1310_67135} {RNA815_34930}

Cumulative graph for MligTC455_42904

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.268	0.588	1.00000	1.00000
RegionR2	-1.134	0.588	1.00000	1.00000
RegionR3	-0.127	0.588	1.00000	1.00000
RegionR4	1.88	0.588	1.00000	1.00000
RegionR5	0.557	0.588	1.00000	1.00000
RegionR6	0.043	0.588	0.99987	1.00000
RegionR7	-0.569	0.588	1.00000	1.00000
RegionR8	-0.917	0.588	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.068	0.588	0.99976	1.00000
RegenerationR2	0.429	0.588	1.00000	1.00000
RegenerationR3	1.759	0.588	0.69842	0.94704
RegenerationR4	1.878	0.588	0.73823	0.96716
RegenerationR5	2.546	0.588	0.59115	0.90611
RegenerationR6	2.321	0.588	0.39714	0.73541
RegenerationBL	0.048	0.588	1.00000	1.00000
RegenerationTP	2.534	0.588	0.58154	0.95050

Genes with expression patterns similar to MligTC455_42904

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42904	22	0.46	Mlig455_020355	Neo: - Age: -		1	-	-	-	1.000	-	-	Mlig455_020355 {REF} {Length: 960} {RNA1310_67135} {RNA815_34930}
2.	MligTC455_31682	194	4.05	Mlig455_045912, Mlig455_050797, Mlig455_056090, Mlig455_062628, Mlig455_063332, Mlig455_067537	Neo: Irradiation Age: Up-Up-Down Region-enriched R5: 3.996/0.00015	PIF1	0.978	-	-	-	0.978	-	-	Mlig455_045912 {REF} {Length: 6495} {Pfam: PIF1-like helicase [PF05970.16, score=268.1]; Helitron helicase-like domain at N-terminus [PF14214.8, score=199.9]; AAA domain [PF13604.8, score=43.0]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=51.2, Expect=1e-05]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=50.8, Expect=1e-05]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=58.9, Expect=3e-08]} {Celegans: WBGene00018020, F33H12.6, [Score=659, Expect=0.0]} {Smed: dd_Smed_v6_22430_0_1, dd_Smed_v6_22430_0_1, [Score=83.2, Expect=7e-19]} {RNA1509_7410} {RNA1310_1350} {RNA815_358.1} Mlig455_050797 {REF} {Length: 6801} {Pfam: PIF1-like helicase [PF05970.16, score=330.1]; Helitron helicase-like domain at N-terminus [PF14214.8, score=199.6]; AAA domain [PF13604.8, score=42.9]; Helicase [PF02689.16, score=23.5]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=89.0, Expect=4e-17]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=90.5, Expect=8e-18]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=83.2, Expect=1e-15]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=801, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=105, Expect=8e-23]} {RNA1509_7410} {RNA1310_3337} {RNA815_358.1} Mlig455_056090 {REF} {Length: 8134} {Pfam: PIF1-like helicase [PF05970.16, score=331.2]; Helitron helicase-like domain at N-terminus [PF14214.8, score=199.9]; AAA domain [PF13604.8, score=46.0]; Helicase [PF02689.16, score=24.0]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.9]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=84.7, Expect=6e-16]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=86.3, Expect=1e-16]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=80.9, Expect=4e-15]} {Celegans: WBGene00018020, F33H12.6, [Score=696, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=108, Expect=4e-24]} {RNA1509_7410} {RNA1310_616.1} {RNA815_358.1} Mlig455_062628 {REF} {Length: 5915} {Pfam: PIF1-like helicase [PF05970.16, score=285.3]; Helitron helicase-like domain at N-terminus [PF14214.8, score=191.6]; Helicase [PF02689.16, score=24.2]; AAA domain [PF13604.8, score=22.2]; UvrD-like helicase C-terminal domain [PF13538.8, score=20.2]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=82.4, Expect=2e-15]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=86.3, Expect=1e-16]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=77.4, Expect=4e-14]} {Celegans: WBGene00018020, F33H12.6, [Score=596, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=90.1, Expect=3e-18]} {RNA1509_7410} {RNA1310_3337} {RNA815_358.1} Mlig455_063332 {REF} {Length: 6737} {Pfam: PIF1-like helicase [PF05970.16, score=332.8]; Helitron helicase-like domain at N-terminus [PF14214.8, score=199.7]; AAA domain [PF13604.8, score=43.4]; Helicase [PF02689.16, score=23.6]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=89.7, Expect=2e-17]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=91.3, Expect=4e-18]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=87.0, Expect=7e-17]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=808, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=107, Expect=2e-23]} {RNA1509_7410} {RNA1310_3337} {RNA815_358.1} Mlig455_067537 {REF} {Length: 7121} {Pfam: PIF1-like helicase [PF05970.16, score=334.1]; Helitron helicase-like domain at N-terminus [PF14214.8, score=198.4]; AAA domain [PF13604.8, score=42.2]; Helicase [PF02689.16, score=23.7]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.7]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=87.0, Expect=1e-16]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=89.4, Expect=2e-17]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=61.2, Expect=6e-09]} {Celegans: WBGene00018020, F33H12.6, [Score=735, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=105, Expect=8e-23]} {RNA1509_7410} {RNA1310_616.1} {RNA815_358.1}
3.	MligTC455_34008	27	0.57	Mlig455_014925	Neo: Germline Age: -		0.975	-	-	-	0.975	-	-	Mlig455_014925 {REF} {Length: 2371} {Pfam: KH domain [PF00013.31, score=27.9]} {Smed: dd_Smed_v6_38277_0_1, dd_Smed_v6_38277_0_1, [RH, Score=49.3, Expect=2e-06]} {RNA1509_5819} {RNA1310_18920} {RNA815_4984}
4.	MligTC455_28380	43	0.89	Mlig455_033856	Neo: Irradiation Age: Up-Down-Down	TTLL10	0.968	-	-	-	0.968	-	-	Mlig455_033856 {REF} {Length: 2731} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=50.3]} {Human: ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=50.8, Expect=1e-05]} {RNA1509_13779, RNA1509_3452, RNA1509_54030} {RNA1310_4496, RNA1509_13779, RNA1509_3452, RNA1509_54030} {RNA1509_13779, RNA1509_3452, RNA1509_54030, RNA815_2377.1}
5.	MligTC455_06588	15	0.3	Mlig455_042189	Neo: - Age: -		0.961	-	-	-	0.961	-	-	Mlig455_042189 {REF} {Length: 421} {TRANSSPLICED} {NoTransDecoderORF}
6.	MligTC455_08790	93	1.94	Mlig455_025717, Mlig455_025769, Mlig455_064422	Neo: Germline Age: Down-Up-Up, logFC(26M/2M)=0.705 Region-specific R5: 5.275 Region-enriched R5: 5.169/0.00000		0.961	-	-	-	0.961	-	-	Mlig455_025717 {REF} {Length: 974} {Pfam: THAP domain [PF05485.14, score=36.2]} {RNA1310_47296} {RNA815_49718} Mlig455_025769 {REF} {Length: 509} {Pfam: THAP domain [PF05485.14, score=36.2]} {RNA1310_47296} {RNA815_49718} Mlig455_064422 {REF} {Length: 934} {Pfam: THAP domain [PF05485.14, score=36.2]} {RNA1310_47296} {RNA815_49718}
7.	MligTC455_18718	34	0.72	Mlig455_044622, Mlig455_044678	Neo: - Age: -		0.96	-	-	-	0.960	-	-	Mlig455_044622 {REF} {Length: 2893} {RNA1509_53544} {RNA1310_45707} {RNA815_63573} Mlig455_044678 {REF} {Length: 2909} {RNA1509_53544} {RNA1310_45707} {RNA815_63573}
8.	MligTC455_13896	9	0.18	Mlig455_016473	Neo: Germline Age: Up-Up-Down, logFC(26M/2M)=1.531 Region-enriched R5: 4.909/0.00061		0.957	-	-	-	0.957	-	-	Mlig455_016473 {REF} {Length: 993} {Pfam: Copper fist DNA binding domain [PF00649.20, score=20.5]} {RNA1509_51447} {RNA1310_15095} {RNA815_15242}
9.	MligTC455_52809	228	4.75	Mlig455_031250	Neo: - Age: - Region-enriched R5: 3.073/0.00003	RAD51	0.955	-	-	-	0.955	-	-	Mlig455_031250 {REF} {Length: 1864} {Pfam: Rad51 [PF08423.13, score=244.5]; Helix-hairpin-helix domain [PF14520.8, score=24.4]} {Human: ENSG00000051180, RAD51, RAD51 recombinase, [Score=343, Expect=4e-118]} {Mouse: ENSMUSG00000027323, Rad51, RAD51 recombinase, [Score=342, Expect=5e-118]} {Dmel: FBgn0003479, spn-A, spindle A, [Score=253, Expect=3e-83]} {Celegans: WBGene00004297, rad-51, RAD51 short isoform; RecA/Rad51/Dmc1-like protein, [Score=240, Expect=5e-78]} {Smed: dd_Smed_v6_8626_0_1, dd_Smed_v6_8626_0_1, [Score=288, Expect=2e-98]} {RNA1509_10251} {RNA1310_22466} {RNA815_9671}
10.	MligTC455_04355	151	3.14	Mlig455_050464	Neo: Int S/G2/M Age: logFC(26M/2M)=0.530 Region-enriched R5: 3.842/0.00000		0.953	-	-	-	0.953	-	-	Mlig455_050464 {REF} {Length: 2328} {Pfam: BEN domain [PF10523.11, score=26.3]} {Smed: dd_Smed_v6_7370_0_1, dd_Smed_v6_7370_0_1, [Score=90.9, Expect=5e-20]} {RNA1310_24027.2} {RNA815_22290}
11.	MligTC455_33624	328	6.83	Mlig455_001418	Neo: - Age: Up-Up-Down, logFC(26M/2M)=0.387 Region-enriched R5: 3.626/0.00002 Region-enriched R4: 3.308/0.00234	NANOS1	0.953	-	-	-	0.953	-	-	Mlig455_001418 {REF} {Length: 2548} {TRANSSPLICED} {Pfam: Nanos RNA binding domain [PF05741.15, score=81.6]} {Human: ENSG00000188613, NANOS1, nanos C2HC-type zinc finger 1, [RH, Score=80.9, Expect=1e-16]; ENSG00000188425, NANOS2, nanos C2HC-type zinc finger 2, [RH, Score=80.1, Expect=1e-17]} {Mouse: ENSMUSG00000072437, Nanos1, nanos C2HC-type zinc finger 1, [RH, Score=81.3, Expect=3e-17]; ENSMUSG00000051965, Nanos2, nanos C2HC-type zinc finger 2, [RH, Score=78.6, Expect=3e-17]} {Dmel: FBgn0002962, nos, Nitric oxide synthase, [RH, Score=78.6, Expect=6e-16]} {Smed: dd_Smed_v6_10484_0_1, dd_Smed_v6_10484_0_1, [RH, Score=111, Expect=9e-29]} {RNA1509_28132, RNA1509_39531} {RNA1310_23023.1, RNA1509_28132, RNA1509_39531} {RNA1509_28132, RNA1509_39531, RNA815_10288}
12.	MligTC455_21071	9	0.18	Mlig455_001747, Mlig455_001769	Neo: - Age: Up-Up-Down, logFC(26M/2M)=-0.486		0.952	-	-	-	0.952	-	-	Mlig455_001747 {REF} {Length: 595} {NoTransDecoderORF} {RNA1509_13258} {RNA1310_17309} {RNA815_9139.2} Mlig455_001769 {REF} {Length: 614} {NoTransDecoderORF} {RNA1509_13258} {RNA1310_17309} {RNA815_9139.2}

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