Data search


search
Exact
Search

Results for MligTC455_42919

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_42919 753 15.68 Mlig455_039581, Mlig455_051390

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.423

Mlig455_039581 {REF} {Length: 686} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_57224} {RNA1310_67086} {RNA815_21495}

Mlig455_051390 {REF} {Length: 1741} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_30052, RNA1509_57224} {RNA1310_41649.1, RNA1509_30052, RNA1509_57224} {RNA1509_30052, RNA1509_57224, RNA815_21495}

Cumulative graph for MligTC455_42919

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.452 4.318 0.71152 1.00000
RegionR2 0.216 4.318 0.74647 1.00000
RegionR3 0.339 4.318 0.51175 0.99996
RegionR4 0.687 4.318 0.27327 0.57972
RegionR5 -0.064 4.318 0.89264 1.00000
RegionR6 -0.13 4.318 0.79958 1.00000
RegionR7 -1.09 4.318 0.10527 0.61731
RegionR8 -0.409 4.318 0.56088 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.64 4.318 0.70362 1.00000
RegenerationR2 -1.578 4.318 0.01033 0.16397
RegenerationR3 -0.533 4.318 0.40300 0.80471
RegenerationR4 -0.896 4.318 0.16088 0.59382
RegenerationR5 0.115 4.318 0.84824 1.00000
RegenerationR6 0.602 4.318 0.33648 0.68282
RegenerationBL 0.447 4.318 0.53730 0.89681
RegenerationTP 0.834 4.318 0.26781 0.71500


Genes with expression patterns similar to MligTC455_42919

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_42919 753 15.68 Mlig455_039581, Mlig455_051390

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.423

6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_039581 {REF} {Length: 686} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_57224} {RNA1310_67086} {RNA815_21495}

Mlig455_051390 {REF} {Length: 1741} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_30052, RNA1509_57224} {RNA1310_41649.1, RNA1509_30052, RNA1509_57224} {RNA1509_30052, RNA1509_57224, RNA815_21495}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA