TomoSeq data search

Data search

Results for MligTC455_42961

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42961

246

5.11

Mlig455_041820

Neo: -

Age: -

Region-enriched R5: 2.063/0.04560

PPWD1

Mlig455_041820 {REF} {Length: 2477} {TRANSSPLICED} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=169.3]; WD domain, G-beta repeat [PF00400.34, score=49.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=26.4]} {Human: ENSG00000113593, PPWD1, peptidylprolyl isomerase domain and WD repeat containing 1, [RH, Score=652, Expect=0.0]} {Mouse: ENSMUSG00000021713, Ppwd1, peptidylprolyl isomerase domain and WD repeat containing 1, [RH, Score=652, Expect=0.0]} {Dmel: FBgn0035027, CG3511, [RH, Score=588, Expect=0.0]} {Celegans: WBGene00000891, cyn-15, CYclophyliN, [RH, Score=545, Expect=0.0]} {Smed: dd_Smed_v6_7620_0_1, dd_Smed_v6_7620_0_1, [RH, Score=546, Expect=0.0]} {RNA1509_24563, RNA1509_34265} {RNA1310_8977, RNA1509_24563} {RNA1509_24563, RNA815_3535}

Cumulative graph for MligTC455_42961

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.947	3.001	0.17042	0.79607
RegionR2	0.809	3.001	0.48887	0.87112
RegionR3	1.439	3.001	0.12318	0.60559
RegionR4	1.226	3.001	0.24527	0.54362
RegionR5	2.063	3.001	0.00722	0.04560
RegionR6	0.978	3.001	0.34120	0.92848
RegionR7	-0.158	3.001	0.90411	1.00000
RegionR8	-0.41	3.001	0.94813	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.211	3.001	0.99996	1.00000
RegenerationR2	0.38	3.001	0.58303	0.90839
RegenerationR3	0.498	3.001	0.50191	0.85789
RegenerationR4	-0.058	3.001	0.94070	1.00000
RegenerationR5	-0.529	3.001	0.44012	0.82432
RegenerationR6	1.069	3.001	0.15501	0.48140
RegenerationBL	1.589	3.001	0.06298	0.29161
RegenerationTP	0.177	3.001	0.88198	1.00000

Genes with expression patterns similar to MligTC455_42961

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42961	246	5.11	Mlig455_041820	Neo: - Age: - Region-enriched R5: 2.063/0.04560	PPWD1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_041820 {REF} {Length: 2477} {TRANSSPLICED} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=169.3]; WD domain, G-beta repeat [PF00400.34, score=49.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=26.4]} {Human: ENSG00000113593, PPWD1, peptidylprolyl isomerase domain and WD repeat containing 1, [RH, Score=652, Expect=0.0]} {Mouse: ENSMUSG00000021713, Ppwd1, peptidylprolyl isomerase domain and WD repeat containing 1, [RH, Score=652, Expect=0.0]} {Dmel: FBgn0035027, CG3511, [RH, Score=588, Expect=0.0]} {Celegans: WBGene00000891, cyn-15, CYclophyliN, [RH, Score=545, Expect=0.0]} {Smed: dd_Smed_v6_7620_0_1, dd_Smed_v6_7620_0_1, [RH, Score=546, Expect=0.0]} {RNA1509_24563, RNA1509_34265} {RNA1310_8977, RNA1509_24563} {RNA1509_24563, RNA815_3535}
2.	MligTC455_03563	760	15.83	Mlig455_025786	Neo: Int S/G2/M Age: -	POLR2B	2.646	-	-	-	0.821	0.848	0.977	Mlig455_025786 {REF} {Length: 1377} {Pfam: RNA polymerase Rpb2, domain 6 [PF00562.30, score=427.0]; RNA polymerase beta subunit [PF04563.17, score=208.1]; RNA polymerase Rpb2, domain 2 [PF04561.16, score=176.6]; RNA polymerase Rpb2, domain 7 [PF04560.22, score=117.0]; RNA polymerase Rpb2, domain 3 [PF04565.18, score=90.9]; RNA polymerase Rpb2, domain 4 [PF04566.15, score=82.5]; RNA polymerase Rpb2, domain 5 [PF04567.19, score=62.5]} {Human: ENSG00000047315, POLR2B, RNA polymerase II subunit B, [RH, Score=2034, Expect=0.0]} {Mouse: ENSMUSG00000029250, Polr2b, polymerase (RNA) II (DNA directed) polypeptide B, [RH, Score=2033, Expect=0.0]} {Dmel: FBgn0262955, RpII140, RNA polymerase II 140kD subunit, [RH, Score=1983, Expect=0.0]} {Celegans: WBGene00016140, rpb-2, DNA-directed RNA polymerase II subunit RPB2, [RH, Score=1895, Expect=0.0]} {Smed: dd_Smed_v6_2182_0_1, dd_Smed_v6_2182_0_1, [RH, Score=1716, Expect=0.0]} {RNA1509_1580} {RNA1310_264.1} {RNA815_603}
3.	MligTC455_41184	122	2.54	Mlig455_027548	Neo: - Age: -	NR2E1	1.879	0.925	-	-	-	0.954	-	Mlig455_027548 {REF} {Length: 3026} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=100.4]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=36.9]} {Human: ENSG00000112333, NR2E1, nuclear receptor subfamily 2 group E member 1, [Score=132, Expect=2e-33]} {Mouse: ENSMUSG00000019803, Nr2e1, nuclear receptor subfamily 2, group E, member 1, [Score=134, Expect=3e-34]} {Dmel: FBgn0003720, tll, tailless, [Score=124, Expect=1e-30]} {Celegans: WBGene00021417, nhr-236, Nuclear Hormone Receptor family, [RH, Score=142, Expect=1e-38]} {Smed: dd_Smed_v6_25420_0_1, dd_Smed_v6_25420_0_1, [Score=167, Expect=1e-45]} {RNA1509_35109} {RNA1310_11088} {RNA815_39381}
4.	MligTC455_13392	406	8.47	Mlig455_009794	Neo: - Age: -	NR1I3	0.982	-	-	-	-	-	0.982	Mlig455_009794 {REF} {Length: 3593} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=71.2]} {Human: ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=100, Expect=3e-22]; ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=97.8, Expect=5e-21]} {Mouse: ENSMUSG00000005677, Nr1i3, nuclear receptor subfamily 1, group I, member 3, [Score=94.7, Expect=1e-20]; ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=90.1, Expect=8e-19]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=98.2, Expect=4e-21]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=112, Expect=8e-26]} {Smed: dd_Smed_v6_5200_0_1, dd_Smed_v6_5200_0_1, [RH, Score=314, Expect=8e-101]} {RNA1509_16056} {RNA1310_3002} {RNA815_8051}
5.	MligTC455_33032	534	11.12	Mlig455_068100	Neo: - Age: -		0.967	-	-	-	-	-	0.967	Mlig455_068100 {REF} {Length: 4924} {RNA1509_40038} {RNA1310_2639.1} {RNA815_10981}
6.	MligTC455_48885	124	2.59	Mlig455_015311	Neo: - Age: Down-Up-Down Region-enriched R2: 3.576/0.03178		0.962	-	-	-	-	-	0.962	Mlig455_015311 {REF} {Length: 3189} {TRANSSPLICED} {Pfam: Oxidoreductase family, NAD-binding Rossmann fold [PF01408.24, score=51.9]; Oxidoreductase family, C-terminal alpha/beta domain [PF02894.19, score=29.7]} {RNA1509_15686} {RNA1310_3343.1} {RNA815_561.1}
7.	MligTC455_54308	443	9.23	Mlig455_000339	Neo: - Age: -		0.961	-	-	-	-	-	0.961	Mlig455_000339 {REF} {Length: 4877} {TRANSSPLICED} {Mouse: ENSMUSG00000036864, Proser3, proline and serine rich 3, [Score=54.3, Expect=2e-07]} {RNA1509_50855} {RNA1310_24012, RNA1509_50855} {RNA1509_50855, RNA815_14541}
8.	MligTC455_51511	239	4.98	Mlig455_037787	Neo: - Age: Down-Up-Down	BRDT	0.96	-	-	-	-	-	0.960	Mlig455_037787 {REF} {Length: 3499} {TRANSSPLICED} {Pfam: Bromodomain [PF00439.27, score=112.2]; Bromodomain extra-terminal - transcription regulation [PF17035.7, score=95.2]} {Human: ENSG00000137948, BRDT, bromodomain testis associated, [Score=213, Expect=5e-58]} {Mouse: ENSMUSG00000029279, Brdt, bromodomain, testis-specific, [Score=212, Expect=7e-58]} {Dmel: FBgn0004656, fs(1)h, female sterile (1) homeotic, [Score=124, Expect=7e-29]} {Celegans: WBGene00022473, bet-1, Bromodomain-containing protein bet-1, [RH, Score=194, Expect=2e-52]} {Smed: dd_Smed_v6_8457_0_1, dd_Smed_v6_8457_0_1, [Score=268, Expect=4e-80]} {RNA1509_9248} {RNA1310_4151.1} {RNA815_11550}
9.	MligTC455_45924	1344	28.01	Mlig455_055371	Neo: - Age: logFC(26M/2M)=0.654 Region-enriched R5: 1.027/0.00032	PRR9	0.956	-	-	-	-	-	0.956	Mlig455_055371 {REF} {Length: 2145} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=47.0, Expect=2e-06]} {RNA1509_16569, RNA1509_18752, RNA1509_32064, RNA1509_57342} {RNA1310_42904, RNA1509_16569, RNA1509_18752, RNA1509_32064} {RNA1509_16569, RNA1509_18752, RNA1509_32064, RNA815_19108}
10.	MligTC455_25033	96	2.01	Mlig455_026043, Mlig455_027665	Neo: - Age: Up-Down-Up	TSC2	0.954	-	-	-	-	0.954	-	Mlig455_026043 {REF} {Length: 7127} {Pfam: Rap/ran-GAP [PF02145.17, score=48.7]; Tuberin [PF03542.18, score=37.9]} {Human: ENSG00000103197, TSC2, TSC complex subunit 2, [RH, Score=99.4, Expect=2e-20]} {Mouse: ENSMUSG00000002496, Tsc2, tuberous sclerosis 2, [RH, Score=93.6, Expect=1e-18]} {Dmel: FBgn0005198, gig, gigas, [RH, Score=90.9, Expect=6e-18]} {Celegans: WBGene00018734, F53A10.2, Rap1GAP, [Score=65.5, Expect=2e-10]} {RNA1509_18642} {RNA1310_1230.2} {RNA815_6983} Mlig455_027665 {REF} {Length: 354} {Pfam: Integrase core domain [PF00665.28, score=40.7]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=95.9, Expect=1e-24]} {RNA1509_18642} {RNA1310_797} {RNA815_6983}
11.	MligTC455_48567	358	7.45	Mlig455_043150	Neo: - Age: - Region-enriched R5: 1.668/0.02982		0.953	-	-	-	-	-	0.953	Mlig455_043150 {REF} {Length: 3448} {TRANSSPLICED} {RNA1509_54015} {RNA1310_37014, RNA1509_54015} {RNA1509_54015, RNA815_7246.1}
12.	MligTC455_40837	356	7.42	Mlig455_046106, Mlig455_070525	Neo: - Age: -	HS2ST1	0.952	-	-	-	-	-	0.952	Mlig455_046106 {REF} {Length: 4309} {TRANSSPLICED} {Pfam: Sulfotransferase family [PF03567.16, score=109.5]; Galactose-3-O-sulfotransferase [PF06990.13, score=21.4]} {Human: ENSG00000153936, HS2ST1, heparan sulfate 2-O-sulfotransferase 1, [RH, Score=347, Expect=2e-117]} {Mouse: ENSMUSG00000040151, Hs2st1, heparan sulfate 2-O-sulfotransferase 1, [RH, Score=345, Expect=7e-117]} {Dmel: FBgn0024230, Hs2st, Heparan sulfate 2-O-sulfotransferase, [RH, Score=332, Expect=7e-112]} {Celegans: WBGene00002029, hst-2, Heparan sulfate 2-O-sulfotransferase hst-2, [RH, Score=257, Expect=2e-83]} {Smed: dd_Smed_v6_6699_0_1, dd_Smed_v6_6699_0_1, [RH, Score=293, Expect=3e-97]} {RNA1509_17362} {RNA1310_14267.2} {RNA815_6989.1} Mlig455_070525 {REF} {Length: 3442} {TRANSSPLICED} {Pfam: Sulfotransferase family [PF03567.16, score=81.4]} {Human: ENSG00000153936, HS2ST1, heparan sulfate 2-O-sulfotransferase 1, [Score=317, Expect=3e-107]} {Mouse: ENSMUSG00000040151, Hs2st1, heparan sulfate 2-O-sulfotransferase 1, [Score=315, Expect=2e-106]} {Dmel: FBgn0024230, Hs2st, Heparan sulfate 2-O-sulfotransferase, [Score=300, Expect=7e-101]} {Celegans: WBGene00002029, hst-2, Heparan sulfate 2-O-sulfotransferase hst-2, [Score=232, Expect=1e-74]} {Smed: dd_Smed_v6_6699_0_1, dd_Smed_v6_6699_0_1, [Score=269, Expect=3e-89]} {RNA1509_17362, RNA1509_55740} {RNA1310_14267.1, RNA1509_17362, RNA1509_55740} {RNA1509_17362, RNA1509_55740, RNA815_6989.1}

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