Data search
Results for MligTC455_42982
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42982 | 1066 | 22.20 | Mlig455_021347 | Neo: - Age: - |
C1GALT1 | Mlig455_021347 {REF} {Length: 2743} {TRANSSPLICED} {Pfam: Fringe-like [PF02434.18, score=41.3]; Galactosyltransferase [PF01762.23, score=27.0]} {Human: ENSG00000106392, C1GALT1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [RH, Score=310, Expect=4e-103]} {Mouse: ENSMUSG00000042460, C1galt1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1, [RH, Score=308, Expect=2e-102]} {Dmel: FBgn0032078, C1GalTA, Core 1 Galactosyltransferase A, [RH, Score=334, Expect=2e-112]} {Celegans: WBGene00008019, C38H2.2, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [RH, Score=347, Expect=9e-118]} {Smed: dd_Smed_v6_4310_0_1, dd_Smed_v6_4310_0_1, [RH, Score=357, Expect=7e-122]} {RNA1509_6198} {RNA1310_20450.1, RNA1509_6198} {RNA1509_6198, RNA815_4261} |
Cumulative graph for MligTC455_42982
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.451 | 4.777 | 0.63924 | 1.00000 | |
| RegionR2 | -0.36 | 4.777 | 0.44711 | 0.83540 | |
| RegionR3 | -0.058 | 4.777 | 0.88002 | 1.00000 | |
| RegionR4 | 0.674 | 4.777 | 0.15232 | 0.40381 | |
| RegionR5 | 0.976 | 4.777 | 0.00447 | 0.03183 | |
| RegionR6 | 0.024 | 4.777 | 0.95116 | 1.00000 | |
| RegionR7 | -0.37 | 4.777 | 0.42203 | 1.00000 | |
| RegionR8 | -0.434 | 4.777 | 0.43115 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.224 | 4.777 | 0.06807 | 0.74816 | |
| RegenerationR2 | -0.119 | 4.777 | 0.78175 | 0.98385 | |
| RegenerationR3 | -0.717 | 4.777 | 0.12478 | 0.54553 | |
| RegenerationR4 | -0.312 | 4.777 | 0.51791 | 0.87876 | |
| RegenerationR5 | -0.819 | 4.777 | 0.05634 | 0.37944 | |
| RegenerationR6 | -0.672 | 4.777 | 0.15851 | 0.48621 | |
| RegenerationBL | -0.053 | 4.777 | 0.91545 | 1.00000 | |
| RegenerationTP | -0.098 | 4.777 | 0.85494 | 1.00000 |
Genes with expression patterns similar to MligTC455_42982
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42982 | 1066 | 22.2 | Mlig455_021347 | Neo: - Age: - |
C1GALT1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_021347 {REF} {Length: 2743} {TRANSSPLICED} {Pfam: Fringe-like [PF02434.18, score=41.3]; Galactosyltransferase [PF01762.23, score=27.0]} {Human: ENSG00000106392, C1GALT1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [RH, Score=310, Expect=4e-103]} {Mouse: ENSMUSG00000042460, C1galt1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1, [RH, Score=308, Expect=2e-102]} {Dmel: FBgn0032078, C1GalTA, Core 1 Galactosyltransferase A, [RH, Score=334, Expect=2e-112]} {Celegans: WBGene00008019, C38H2.2, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [RH, Score=347, Expect=9e-118]} {Smed: dd_Smed_v6_4310_0_1, dd_Smed_v6_4310_0_1, [RH, Score=357, Expect=7e-122]} {RNA1509_6198} {RNA1310_20450.1, RNA1509_6198} {RNA1509_6198, RNA815_4261} |
| 2. | MligTC455_53938 | 904 | 18.84 | Mlig455_016214 | Neo: - Age: logFC(26M/2M)=-0.327 |
TMEM208 | 1.678 | 0.723 | - | - | - | - | 0.955 | Mlig455_016214 {REF} {Length: 3600} {TRANSSPLICED} {Pfam: SRP-independent targeting protein 2/TMEM208 [PF05620.13, score=142.0]} {Human: ENSG00000168701, TMEM208, transmembrane protein 208, [RH, Score=138, Expect=4e-37]} {Mouse: ENSMUSG00000014856, Tmem208, transmembrane protein 208, [RH, Score=141, Expect=2e-38]} {Dmel: FBgn0034059, CG8320, [RH, Score=120, Expect=5e-31]} {Celegans: WBGene00011033, R05D11.5, [RH, Score=70.9, Expect=5e-14]} {Smed: dd_Smed_v6_12915_0_1, dd_Smed_v6_12915_0_1, [RH, Score=127, Expect=2e-33]} {RNA1509_15787} {RNA1310_11648} {RNA815_13651} |
| 3. | MligTC455_53939 | 898 | 18.7 | Mlig455_054270 | Neo: - Age: - |
TMEM208 | 1.678 | 0.726 | - | - | - | - | 0.952 | Mlig455_054270 {REF} {Length: 1708} {TRANSSPLICED} {Pfam: SRP-independent targeting protein 2/TMEM208 [PF05620.13, score=142.0]} {Human: ENSG00000168701, TMEM208, transmembrane protein 208, [RH, Score=138, Expect=4e-37]} {Mouse: ENSMUSG00000014856, Tmem208, transmembrane protein 208, [RH, Score=141, Expect=2e-38]} {Dmel: FBgn0034059, CG8320, [RH, Score=120, Expect=5e-31]} {Celegans: WBGene00011033, R05D11.5, [RH, Score=70.9, Expect=5e-14]} {Smed: dd_Smed_v6_12915_0_1, dd_Smed_v6_12915_0_1, [RH, Score=127, Expect=2e-33]} {RNA1509_21477, RNA1509_29611} {RNA1310_45280, RNA1509_21477} {RNA1509_21477, RNA815_13651} |
| 4. | MligTC455_47696 | 1742 | 36.29 | Mlig455_050774 | Neo: - Age: - |
SRRM1 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_050774 {REF} {Length: 3623} {Pfam: PWI domain [PF01480.19, score=80.7]} {Human: ENSG00000133226, SRRM1, serine and arginine repetitive matrix 1, [RH, Score=182, Expect=2e-47]} {Mouse: ENSMUSG00000028809, Srrm1, serine/arginine repetitive matrix 1, [RH, Score=183, Expect=7e-48]} {Dmel: FBgn0036340, SRm160, [RH, Score=168, Expect=4e-43]} {Celegans: WBGene00004706, rsr-1, SR protein related, [RH, Score=159, Expect=6e-41]} {Smed: dd_Smed_v6_3886_0_1, dd_Smed_v6_3886_0_1, [Score=169, Expect=9e-44]} {RNA1509_47406, RNA1509_48534} {RNA1310_944, RNA1509_47406} {RNA1509_47406, RNA815_383.1} |
| 5. | MligTC455_30860 | 1595 | 33.23 | Mlig455_047536 | Neo: - Age: - |
TRIP12 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_047536 {REF} {Length: 5542} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=253.2]} {Human: ENSG00000153827, TRIP12, thyroid hormone receptor interactor 12, [Score=529, Expect=2e-168]} {Mouse: ENSMUSG00000026219, Trip12, thyroid hormone receptor interactor 12, [Score=523, Expect=2e-166]} {Dmel: FBgn0260794, ctrip, circadian trip, [RH, Score=326, Expect=1e-96]} {Celegans: WBGene00016405, hecd-1, HECtD1 ubiquitin ligase homolog, [Score=246, Expect=1e-69]} {Smed: dd_Smed_v6_2525_0_4, dd_Smed_v6_2525_0_4, [Score=396, Expect=4e-121]} {RNA1509_1044} {RNA1310_351.2} {RNA815_5070} |
| 6. | MligTC455_47342 | 79 | 1.64 | Mlig455_024042 | Neo: - Age: - |
FMO5 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_024042 {REF} {Length: 2378} {TRANSSPLICED} {Pfam: Flavin-binding monooxygenase-like [PF00743.21, score=552.1]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=53.8]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=39.7]; L-lysine 6-monooxygenase (NADPH-requiring) [PF13434.8, score=28.8]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=21.9]} {Human: ENSG00000131781, FMO5, flavin containing monooxygenase 5, [Score=437, Expect=6e-148]; ENSG00000094963, FMO2, flavin containing monooxygenase 2, [Score=424, Expect=6e-143]} {Mouse: ENSMUSG00000028088, Fmo5, flavin containing monooxygenase 5, [Score=469, Expect=2e-160]; ENSMUSG00000026560, Fmo9, flavin containing monooxygenase 9, [Score=454, Expect=2e-154]} {Dmel: FBgn0034943, Fmo-1, Flavin-containing monooxygenase 1, [Score=145, Expect=4e-38]} {Celegans: WBGene00001479, fmo-4, Flavin-containing monooxygenase, [RH, Score=420, Expect=3e-141]} {RNA1509_25280, RNA1509_30763} {RNA1310_18114, RNA1509_25280, RNA1509_30763} {RNA1509_25280, RNA1509_30763, RNA815_3357} |
Berezikov Lab - 2020-2021 © ERIBA