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Results for MligTC455_43028

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43028 4352 90.66 Mlig455_022107

Neo: -

Age: Down-Up-Down

 REEP5 Mlig455_022107 {REF} {Length: 4235} {Pfam: TB2/DP1, HVA22 family [PF03134.21, score=95.0]} {Human: ENSG00000129625, REEP5, receptor accessory protein 5, [RH, Score=188, Expect=2e-60]; ENSG00000115255, REEP6, receptor accessory protein 6, [RH, Score=179, Expect=5e-57]} {Mouse: ENSMUSG00000005873, Reep5, receptor accessory protein 5, [RH, Score=189, Expect=5e-61]} {Dmel: FBgn0033906, CG8331, [RH, Score=147, Expect=6e-45]} {Celegans: WBGene00022127, yop-1, Receptor expression-enhancing protein, [RH, Score=153, Expect=5e-47]} {Smed: dd_Smed_v6_838_0_1, dd_Smed_v6_838_0_1, [RH, Score=219, Expect=3e-73]} {RNA1509_11401, RNA1509_2646, RNA1509_26900, RNA1509_31127, RNA1509_4196, RNA1509_45496, RNA1509_4578, RNA1509_60136, RNA1509_634, RNA1509_7918, RNA1509_9210} {RNA1310_1401, RNA1509_11401, RNA1509_2646, RNA1509_26900, RNA1509_31127, RNA1509_4196, RNA1509_4578, RNA1509_60136, RNA1509_634, RNA1509_7918, RNA1509_9210} {RNA1509_11401, RNA1509_2646, RNA1509_26900, RNA1509_31127, RNA1509_4196, RNA1509_4578, RNA1509_60136, RNA1509_634, RNA1509_7918, RNA1509_9210, RNA815_252.1}

Cumulative graph for MligTC455_43028

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.107 6.636 0.81521 1.00000
RegionR2 -0.292 6.636 0.29318 0.68167
RegionR3 0.477 6.636 0.02674 0.27895
RegionR4 -0.182 6.636 0.47667 0.80480
RegionR5 0.699 6.636 0.00036 0.00455
RegionR6 0.236 6.636 0.27746 0.86757
RegionR7 -0.589 6.636 0.03008 0.32977
RegionR8 -0.457 6.636 0.16597 0.73741

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.295 6.636 0.62387 1.00000
RegenerationR2 0.034 6.636 0.89720 1.00000
RegenerationR3 -0.169 6.636 0.53178 0.87310
RegenerationR4 0.087 6.636 0.75189 0.97037
RegenerationR5 -0.265 6.636 0.31184 0.73724
RegenerationR6 -0.212 6.636 0.43682 0.76183
RegenerationBL 0.097 6.636 0.73989 1.00000
RegenerationTP 0.079 6.636 0.80691 1.00000


Genes with expression patterns similar to MligTC455_43028

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43028 4352 90.66 Mlig455_022107

Neo: -

Age: Down-Up-Down

 REEP5 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_022107 {REF} {Length: 4235} {Pfam: TB2/DP1, HVA22 family [PF03134.21, score=95.0]} {Human: ENSG00000129625, REEP5, receptor accessory protein 5, [RH, Score=188, Expect=2e-60]; ENSG00000115255, REEP6, receptor accessory protein 6, [RH, Score=179, Expect=5e-57]} {Mouse: ENSMUSG00000005873, Reep5, receptor accessory protein 5, [RH, Score=189, Expect=5e-61]} {Dmel: FBgn0033906, CG8331, [RH, Score=147, Expect=6e-45]} {Celegans: WBGene00022127, yop-1, Receptor expression-enhancing protein, [RH, Score=153, Expect=5e-47]} {Smed: dd_Smed_v6_838_0_1, dd_Smed_v6_838_0_1, [RH, Score=219, Expect=3e-73]} {RNA1509_11401, RNA1509_2646, RNA1509_26900, RNA1509_31127, RNA1509_4196, RNA1509_45496, RNA1509_4578, RNA1509_60136, RNA1509_634, RNA1509_7918, RNA1509_9210} {RNA1310_1401, RNA1509_11401, RNA1509_2646, RNA1509_26900, RNA1509_31127, RNA1509_4196, RNA1509_4578, RNA1509_60136, RNA1509_634, RNA1509_7918, RNA1509_9210} {RNA1509_11401, RNA1509_2646, RNA1509_26900, RNA1509_31127, RNA1509_4196, RNA1509_4578, RNA1509_60136, RNA1509_634, RNA1509_7918, RNA1509_9210, RNA815_252.1}
2. MligTC455_40493 1086 22.62 Mlig455_063091

Neo: -

Age: -

Region-enriched R4: 1.094/0.01098

 BCAS3 2.556 0.810 0.791 - 0.955 - - Mlig455_063091 {REF} {Length: 5479} {TRANSSPLICED} {Pfam: Breast carcinoma amplified sequence 3 [PF12490.10, score=30.6]} {Human: ENSG00000141376, BCAS3, BCAS3, microtubule associated cell migration factor, [Score=231, Expect=2e-63]} {Mouse: ENSMUSG00000059439, Bcas3, breast carcinoma amplified sequence 3, [Score=233, Expect=2e-64]} {Dmel: FBgn0266019, rudhira, [RH, Score=159, Expect=1e-39]} {Celegans: WBGene00018953, F56C9.10, [RH, Score=162, Expect=8e-41]} {Smed: dd_Smed_v6_7548_0_1, dd_Smed_v6_7548_0_1, [RH, Score=157, Expect=8e-40]} {RNA1509_3732} {RNA1310_7059} {RNA815_2410}
3. MligTC455_21493 859 17.89 Mlig455_059385

Neo: -

Age: Down-Down-Up

 YWHAE 0.964 - - - - 0.964 - Mlig455_059385 {REF} {Length: 1860} {Pfam: 14-3-3 protein [PF00244.22, score=353.7]} {Human: ENSG00000274474, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [RH, Score=392, Expect=3e-139]; ENSG00000108953, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [RH, Score=392, Expect=3e-139]} {Mouse: ENSMUSG00000020849, Ywhae, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide, [RH, Score=392, Expect=2e-139]} {Dmel: FBgn0020238, 14-3-3epsilon, [RH, Score=388, Expect=8e-138]} {Celegans: WBGene00003920, par-5, 14-3-3-like protein 1, [Score=310, Expect=3e-107]} {Smed: dd_Smed_v6_1702_0_1, dd_Smed_v6_1702_0_1, [RH, Score=360, Expect=3e-127]} {RNA1509_19788, RNA1509_2790} {RNA1310_17239.1, RNA1509_19788} {RNA1509_19788, RNA815_6314.1}
4. MligTC455_27711 5412 112.74 Mlig455_015953

Neo: -

Age: -

 0.956 - - - 0.956 - - Mlig455_015953 {REF} {Length: 4324} {TRANSSPLICED} {Celegans: WBGene00001328, epi-1, Laminin-like protein epi-1, [Score=59.3, Expect=2e-08]} {RNA1509_1071, RNA1509_17652, RNA1509_2106, RNA1509_25765, RNA1509_25775, RNA1509_33455, RNA1509_34384, RNA1509_40442, RNA1509_42939, RNA1509_46109, RNA1509_46798, RNA1509_48212} {RNA1310_1918.1, RNA1509_1071, RNA1509_17652, RNA1509_2106, RNA1509_25765, RNA1509_25775, RNA1509_33455, RNA1509_34384, RNA1509_40442, RNA1509_42939, RNA1509_46109, RNA1509_46798, RNA1509_48212} {RNA1509_1071, RNA1509_17652, RNA1509_2106, RNA1509_25765, RNA1509_25775, RNA1509_33455, RNA1509_34384, RNA1509_40442, RNA1509_42939, RNA1509_46109, RNA1509_46798, RNA1509_48212, RNA815_538.1}
5. MligTC455_35818 1219 25.4 Mlig455_017352, Mlig455_017435

Neo: -

Age: Up-Down-Down

 ARHGEF12 0.956 - - - 0.956 - -

Mlig455_017352 {REF} {Length: 8693} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=20.8} {Pfam: PDZ domain [PF17820.3, score=36.8]; PDZ domain [PF00595.26, score=36.0]; Regulator of G protein signalling-like domain [PF09128.13, score=28.2]; PDZ domain [PF13180.8, score=27.9]; RhoGEF domain [PF00621.22, score=24.1]} {Human: ENSG00000196914, ARHGEF12, Rho guanine nucleotide exchange factor 12, [Score=61.2, Expect=2e-08]} {Mouse: ENSMUSG00000059495, Arhgef12, Rho guanine nucleotide exchange factor (GEF) 12, [Score=60.1, Expect=3e-08]} {Dmel: FBgn0263846, CG43707, [Score=55.5, Expect=7e-07]} {Celegans: WBGene00006468, rhgf-1, RHo Guanine nucleotide exchange Factor, [Score=54.7, Expect=8e-07]} {RNA1509_9517} {RNA1310_569.3} {RNA815_247}

Mlig455_017435 {REF} {Length: 8120} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=20.7} {Pfam: Regulator of G protein signalling-like domain [PF09128.13, score=26.7]; RhoGEF domain [PF00621.22, score=22.3]} {RNA1509_9517} {RNA1310_759.2} {RNA815_247}
6. MligTC455_46501 3760 78.33 Mlig455_027510, Mlig455_046061

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.332

 SDHAF2 0.952 - - - - - 0.952

Mlig455_027510 {REF} {Length: 975} {TRANSSPLICED} {Pfam: Flavinator of succinate dehydrogenase [PF03937.18, score=115.4]} {Human: ENSG00000167985, SDHAF2, succinate dehydrogenase complex assembly factor 2, [RH, Score=128, Expect=2e-36]; ENSG00000256591, AP003108.2, novel transcript, [RH, Score=127, Expect=3e-36]} {Mouse: ENSMUSG00000024668, Sdhaf2, succinate dehydrogenase complex assembly factor 2, [RH, Score=128, Expect=2e-36]} {Dmel: FBgn0033274, CG14757, [RH, Score=118, Expect=6e-33]} {Celegans: WBGene00013269, Y57A10A.29, Succinate dehydrogenase assembly factor 2, mitochondrial, [RH, Score=74.3, Expect=1e-16]} {Smed: dd_Smed_v6_4239_0_1, dd_Smed_v6_4239_0_1, [RH, Score=135, Expect=1e-39]} {RNA1509_13852, RNA1509_54119, RNA1509_8729} {RNA1310_30136.1, RNA1509_13852, RNA1509_54119, RNA1509_8729} {RNA1509_13852, RNA1509_54119, RNA1509_8729, RNA815_14144.1}

Mlig455_046061 {REF} {Length: 954} {TRANSSPLICED} {Pfam: Flavinator of succinate dehydrogenase [PF03937.18, score=114.7]} {Human: ENSG00000167985, SDHAF2, succinate dehydrogenase complex assembly factor 2, [RH, Score=127, Expect=4e-36]; ENSG00000256591, AP003108.2, novel transcript, [RH, Score=127, Expect=4e-36]} {Mouse: ENSMUSG00000024668, Sdhaf2, succinate dehydrogenase complex assembly factor 2, [RH, Score=127, Expect=3e-36]} {Dmel: FBgn0033274, CG14757, [RH, Score=119, Expect=4e-33]} {Celegans: WBGene00013269, Y57A10A.29, Succinate dehydrogenase assembly factor 2, mitochondrial, [RH, Score=73.9, Expect=1e-16]} {Smed: dd_Smed_v6_4239_0_1, dd_Smed_v6_4239_0_1, [RH, Score=136, Expect=4e-40]} {RNA1509_8729} {RNA1310_30136.2} {RNA815_14144.1}
7. MligTC455_49494 979 20.4 Mlig455_055852

Neo: -

Age: -

 COX17 0.951 - - - 0.951 - - Mlig455_055852 {REF} {Length: 1528} {TRANSSPLICED} {Pfam: Cytochrome C oxidase copper chaperone (COX17) [PF05051.15, score=73.9]} {Human: ENSG00000138495, COX17, cytochrome c oxidase copper chaperone COX17, [RH, Score=70.5, Expect=1e-17]} {Mouse: ENSMUSG00000095464, Gm21987, predicted gene 21987, [RH, Score=68.9, Expect=4e-17]; ENSMUSG00000046516, Cox17, cytochrome c oxidase assembly protein 17, copper chaperone, [RH, Score=68.9, Expect=4e-17]} {Dmel: FBgn0030610, CG9065, [RH, Score=63.5, Expect=7e-15]} {Celegans: WBGene00018240, cox-17, Cytochrome OXidase assembly protein, [RH, Score=67.4, Expect=9e-17]} {Smed: dd_Smed_v6_732_0_1, dd_Smed_v6_732_0_1, [RH, Score=66.2, Expect=3e-16]} {RNA1509_10350, RNA1509_25578, RNA1509_30623} {RNA1310_17427, RNA1509_10350, RNA1509_25578, RNA1509_30623} {RNA1509_10350, RNA1509_25578, RNA1509_30623, RNA815_14491}

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