TomoSeq data search

Data search

Results for MligTC455_43112

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43112

312

6.49

Mlig455_020035

Neo: -

Age: Down-Up-Down

ELOVL7

Mlig455_020035 {REF} {Length: 1089} {Pfam: GNS1/SUR4 family [PF01151.20, score=209.9]} {Human: ENSG00000164181, ELOVL7, ELOVL fatty acid elongase 7, [RH, Score=250, Expect=4e-82]} {Mouse: ENSMUSG00000021696, Elovl7, ELOVL family member 7, elongation of long chain fatty acids (yeast), [Score=259, Expect=1e-85]; ENSMUSG00000006390, Elovl1, elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1, [Score=255, Expect=4e-84]} {Dmel: FBgn0037534, CG2781, [RH, Score=285, Expect=2e-95]} {Celegans: WBGene00001245, elo-7, Elongation of very long chain fatty acids protein, [Score=89.7, Expect=2e-20]} {Smed: dd_Smed_v6_10529_0_1, dd_Smed_v6_10529_0_1, [RH, Score=243, Expect=5e-80]} {RNA1509_47946} {RNA1310_30363} {RNA815_12464}

Cumulative graph for MligTC455_43112

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.641	3.065	0.62038	1.00000
RegionR2	0.311	3.065	0.61394	0.96056
RegionR3	0.112	3.065	0.81300	1.00000
RegionR4	-0.848	3.065	0.18286	0.45446
RegionR5	-0.58	3.065	0.22295	0.52567
RegionR6	-0.716	3.065	0.18156	0.74551
RegionR7	0.178	3.065	0.77279	1.00000
RegionR8	0.901	3.065	0.17583	0.75501

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-6.37	3.065	0.17179	0.91574
RegenerationR2	-0.438	3.065	0.41347	0.82274
RegenerationR3	-0.25	3.065	0.68658	0.94271
RegenerationR4	-0.485	3.065	0.46456	0.84997
RegenerationR5	-1.482	3.065	0.02030	0.24668
RegenerationR6	-0.537	3.065	0.43252	0.75927
RegenerationBL	-2.021	3.065	0.03642	0.21536
RegenerationTP	-0.557	3.065	0.44264	0.86203

Genes with expression patterns similar to MligTC455_43112

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43112	312	6.49	Mlig455_020035	Neo: - Age: Down-Up-Down	ELOVL7	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_020035 {REF} {Length: 1089} {Pfam: GNS1/SUR4 family [PF01151.20, score=209.9]} {Human: ENSG00000164181, ELOVL7, ELOVL fatty acid elongase 7, [RH, Score=250, Expect=4e-82]} {Mouse: ENSMUSG00000021696, Elovl7, ELOVL family member 7, elongation of long chain fatty acids (yeast), [Score=259, Expect=1e-85]; ENSMUSG00000006390, Elovl1, elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1, [Score=255, Expect=4e-84]} {Dmel: FBgn0037534, CG2781, [RH, Score=285, Expect=2e-95]} {Celegans: WBGene00001245, elo-7, Elongation of very long chain fatty acids protein, [Score=89.7, Expect=2e-20]} {Smed: dd_Smed_v6_10529_0_1, dd_Smed_v6_10529_0_1, [RH, Score=243, Expect=5e-80]} {RNA1509_47946} {RNA1310_30363} {RNA815_12464}
2.	MligTC455_19551	361	7.52	Mlig455_047808, Mlig455_047885	Neo: - Age: -		2.417	-	-	-	0.737	0.730	0.950	Mlig455_047808 {REF} {Length: 3001} {Smed: dd_Smed_v6_14814_0_1, dd_Smed_v6_14814_0_1, [Score=88.2, Expect=2e-22]} {RNA1509_46635} {RNA1310_30981} {RNA815_12742} Mlig455_047885 {REF} {Length: 1622} {Smed: dd_Smed_v6_14814_0_1, dd_Smed_v6_14814_0_1, [Score=88.2, Expect=2e-22]} {RNA1509_40551} {RNA1310_30981} {RNA815_12742}
3.	MligTC455_30998	353	7.36	Mlig455_041372, Mlig455_062743	Neo: - Age: -		1.757	-	-	-	0.805	-	0.952	Mlig455_041372 {REF} {Length: 239} {NoTransDecoderORF} {RNA1509_13580} {RNA1310_166} {RNA815_5586} Mlig455_062743 {REF} {Length: 223} {NoTransDecoderORF} {RNA1509_13580} {RNA1310_166} {RNA815_5586}
4.	MligTC455_42172	67	1.39	Mlig455_066943	Neo: - Age: Down-Up-Up		1.678	-	-	0.728	0.950	-	-	Mlig455_066943 {REF} {Length: 2101} {Pfam: Innexin [PF00876.20, score=94.4]} {Celegans: WBGene00002133, inx-11, Innexin-11, [Score=87.8, Expect=9e-20]} {Smed: dd_Smed_v6_11501_0_1, dd_Smed_v6_11501_0_1, [Score=112, Expect=1e-28]} {RNA1509_10527} {RNA1310_14408} {RNA815_844.2}
5.	MligTC455_16484	143	2.98	Mlig455_046445	Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 2.391/0.02013 Regeneration-downregulated R4: -3.574 Regeneration-depleted R4: -3.574		0.955	-	-	-	-	-	0.955	Mlig455_046445 {REF} {Length: 3436} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=41.6]} {Smed: dd_Smed_v6_8643_0_1, dd_Smed_v6_8643_0_1, [Score=130, Expect=1e-33]} {RNA1509_19863} {RNA1310_10105.1, RNA1509_19863} {RNA1509_19863, RNA815_12791.1}
6.	MligTC455_41181	708	14.76	Mlig455_049760	Neo: - Age: logFC(26M/2M)=-0.377 Region-enriched R2: 2.010/0.02984	AK5	0.955	-	-	-	0.955	-	-	Mlig455_049760 {REF} {Length: 2835} {TRANSSPLICED} {Pfam: Adenylate kinase [PF00406.24, score=105.1]; AAA domain [PF13207.8, score=87.6]; AAA domain [PF13238.8, score=49.8]; AAA domain [PF13671.8, score=35.6]; IQ calmodulin-binding motif [PF00612.29, score=33.6]; AAA ATPase domain [PF13191.8, score=29.8]; AAA domain [PF13521.8, score=22.3]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=20.4]; AAA domain [PF13245.8, score=20.1]} {Human: ENSG00000154027, AK5, adenylate kinase 5, [RH, Score=223, Expect=6e-64]} {Mouse: ENSMUSG00000039058, Ak5, adenylate kinase 5, [RH, Score=222, Expect=1e-63]} {Dmel: FBgn0032083, CG9541, [RH, Score=109, Expect=1e-24]} {Celegans: WBGene00008746, F13E6.2, [Score=126, Expect=7e-30]} {Smed: dd_Smed_v6_5119_0_1, dd_Smed_v6_5119_0_1, [RH, Score=266, Expect=1e-77]} {RNA1509_14765, RNA1509_30132} {RNA1310_6179.1, RNA1509_14765, RNA1509_30132} {RNA1509_14765, RNA1509_30132, RNA815_3037}
7.	MligTC455_24552	1774	36.95	Mlig455_015821, Mlig455_015828	Neo: - Age: Up-Up-Up	IQCE	0.952	-	-	-	0.952	-	-	Mlig455_015821 {REF} {Length: 2698} {TRANSSPLICED} {Pfam: Fez1 [PF06818.17, score=21.8]; IQ calmodulin-binding motif [PF00612.29, score=21.0]} {Human: ENSG00000106012, IQCE, IQ motif containing E, [RH, Score=127, Expect=5e-30]} {Mouse: ENSMUSG00000036555, Iqce, IQ motif containing E, [RH, Score=128, Expect=1e-30]} {Smed: dd_Smed_v6_7345_0_1, dd_Smed_v6_7345_0_1, [RH, Score=73.6, Expect=7e-14]} {RNA1509_3714} {RNA1310_6916.1} {RNA815_2091.1} Mlig455_015828 {REF} {Length: 2744} {TRANSSPLICED} {Pfam: Fez1 [PF06818.17, score=21.8]; IQ calmodulin-binding motif [PF00612.29, score=21.0]} {Human: ENSG00000106012, IQCE, IQ motif containing E, [RH, Score=127, Expect=5e-30]} {Mouse: ENSMUSG00000036555, Iqce, IQ motif containing E, [RH, Score=128, Expect=1e-30]} {Smed: dd_Smed_v6_7345_0_1, dd_Smed_v6_7345_0_1, [RH, Score=73.6, Expect=7e-14]} {RNA1509_3714} {RNA1310_6916.1, RNA1509_3714} {RNA1509_3714, RNA815_2091.1}
8.	MligTC455_13530	655	13.64	Mlig455_010309	Neo: - Age: logFC(26M/2M)=-0.407 Region-enriched R2: 1.763/0.03276	SLC4A10	0.95	-	-	-	0.950	-	-	Mlig455_010309 {REF} {Length: 4647} {Pfam: HCO3- transporter family [PF00955.23, score=692.6]; Band 3 cytoplasmic domain [PF07565.15, score=136.2]} {Human: ENSG00000144290, SLC4A10, solute carrier family 4 member 10, [Score=738, Expect=0.0]; ENSG00000033867, SLC4A7, solute carrier family 4 member 7, [Score=730, Expect=0.0]; ENSG00000050438, SLC4A8, solute carrier family 4 member 8, [Score=720, Expect=0.0]; ENSG00000080493, SLC4A4, solute carrier family 4 member 4, [Score=716, Expect=0.0]} {Mouse: ENSMUSG00000026904, Slc4a10, solute carrier family 4, sodium bicarbonate cotransporter-like, member 10, [Score=736, Expect=0.0]; ENSMUSG00000021733, Slc4a7, solute carrier family 4, sodium bicarbonate cotransporter, member 7, [Score=722, Expect=0.0]; ENSMUSG00000023032, Slc4a8, solute carrier family 4 (anion exchanger), member 8, [Score=722, Expect=0.0]; ENSMUSG00000060961, Slc4a4, solute carrier family 4 (anion exchanger), member 4, [Score=720, Expect=0.0]} {Dmel: FBgn0259111, Ndae1, Na[+]-driven anion exchanger 1, [Score=756, Expect=0.0]} {Celegans: WBGene00009920, abts-1, Anion exchange protein, [Score=671, Expect=0.0]} {Smed: dd_Smed_v6_3003_0_2, dd_Smed_v6_3003_0_2, [Score=844, Expect=0.0]} {RNA1509_21736, RNA1509_3893, RNA1509_4226, RNA1509_53087} {RNA1310_2467, RNA1509_21736, RNA1509_3893, RNA1509_4226, RNA1509_53087} {RNA1509_21736, RNA1509_3893, RNA1509_4226, RNA1509_53087, RNA815_1366}

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