Data search


search
Exact
Search

Results for MligTC455_43144

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43144 1935 40.31 Mlig455_013579, Mlig455_013631

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.298

Region-enriched R4: 1.831/0.00005
Region-enriched R5: 1.440/0.00015

MRPS18A

Mlig455_013579 {REF} {Length: 666} {TRANSSPLICED} {Pfam: Ribosomal protein S18 [PF01084.22, score=55.6]} {Human: ENSG00000096080, MRPS18A, mitochondrial ribosomal protein S18A, [RH, Score=59.3, Expect=7e-11]} {Mouse: ENSMUSG00000023967, Mrps18a, mitochondrial ribosomal protein S18A, [RH, Score=56.2, Expect=6e-10]} {Dmel: FBgn0051450, mRpS18A, mitochondrial ribosomal protein S18A, [RH, Score=53.9, Expect=2e-09]} {Smed: dd_Smed_v6_9080_0_1, dd_Smed_v6_9080_0_1, [RH, Score=92.8, Expect=2e-24]} {RNA1509_9347} {RNA1310_38304.1} {RNA815_18478}

Mlig455_013631 {REF} {Length: 666} {TRANSSPLICED} {Pfam: Ribosomal protein S18 [PF01084.22, score=55.6]} {Human: ENSG00000096080, MRPS18A, mitochondrial ribosomal protein S18A, [RH, Score=59.3, Expect=7e-11]} {Mouse: ENSMUSG00000023967, Mrps18a, mitochondrial ribosomal protein S18A, [RH, Score=56.2, Expect=6e-10]} {Dmel: FBgn0051450, mRpS18A, mitochondrial ribosomal protein S18A, [RH, Score=53.9, Expect=2e-09]} {Smed: dd_Smed_v6_9080_0_1, dd_Smed_v6_9080_0_1, [RH, Score=92.8, Expect=2e-24]} {RNA1509_26387, RNA1509_9347} {RNA1310_38304.1, RNA1509_26387, RNA1509_9347} {RNA1509_26387, RNA1509_9347, RNA815_18478}

Cumulative graph for MligTC455_43144

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.875 5.573 0.02811 0.43761
RegionR2 -0.365 5.573 0.39660 0.79086
RegionR3 0.34 5.573 0.32899 0.86715
RegionR4 1.831 5.573 0.00000 0.00005
RegionR5 1.44 5.573 0.00001 0.00015
RegionR6 0.683 5.573 0.04895 0.41415
RegionR7 -0.177 5.573 0.66437 1.00000
RegionR8 -1.877 5.573 0.00123 0.05440

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.576 5.573 0.67019 1.00000
RegenerationR2 0.086 5.573 0.82872 0.99727
RegenerationR3 -0.131 5.573 0.74981 0.96476
RegenerationR4 -0.141 5.573 0.73366 0.96548
RegenerationR5 -0.024 5.573 0.94985 1.00000
RegenerationR6 -0.34 5.573 0.41149 0.74509
RegenerationBL 0.439 5.573 0.30616 0.67050
RegenerationTP 0.926 5.573 0.05826 0.39235


Genes with expression patterns similar to MligTC455_43144

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43144 1935 40.31 Mlig455_013579, Mlig455_013631

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.298

Region-enriched R4: 1.831/0.00005
Region-enriched R5: 1.440/0.00015

MRPS18A 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_013579 {REF} {Length: 666} {TRANSSPLICED} {Pfam: Ribosomal protein S18 [PF01084.22, score=55.6]} {Human: ENSG00000096080, MRPS18A, mitochondrial ribosomal protein S18A, [RH, Score=59.3, Expect=7e-11]} {Mouse: ENSMUSG00000023967, Mrps18a, mitochondrial ribosomal protein S18A, [RH, Score=56.2, Expect=6e-10]} {Dmel: FBgn0051450, mRpS18A, mitochondrial ribosomal protein S18A, [RH, Score=53.9, Expect=2e-09]} {Smed: dd_Smed_v6_9080_0_1, dd_Smed_v6_9080_0_1, [RH, Score=92.8, Expect=2e-24]} {RNA1509_9347} {RNA1310_38304.1} {RNA815_18478}

Mlig455_013631 {REF} {Length: 666} {TRANSSPLICED} {Pfam: Ribosomal protein S18 [PF01084.22, score=55.6]} {Human: ENSG00000096080, MRPS18A, mitochondrial ribosomal protein S18A, [RH, Score=59.3, Expect=7e-11]} {Mouse: ENSMUSG00000023967, Mrps18a, mitochondrial ribosomal protein S18A, [RH, Score=56.2, Expect=6e-10]} {Dmel: FBgn0051450, mRpS18A, mitochondrial ribosomal protein S18A, [RH, Score=53.9, Expect=2e-09]} {Smed: dd_Smed_v6_9080_0_1, dd_Smed_v6_9080_0_1, [RH, Score=92.8, Expect=2e-24]} {RNA1509_26387, RNA1509_9347} {RNA1310_38304.1, RNA1509_26387, RNA1509_9347} {RNA1509_26387, RNA1509_9347, RNA815_18478}
2. MligTC455_53686 344 7.17 Mlig455_048654

Neo: -

Age: logFC(26M/2M)=1.515

0.952 - - - 0.952 - - Mlig455_048654 {REF} {Length: 1643} {TRANSSPLICED} {RNA1509_10149} {RNA1310_44592.2} {RNA815_23130}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA